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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100365g5.933.mrna |
| Orig protein id | gnl|cribi|Naga_100365g5.933 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:176908..179215 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4283 ID=rna4283|Name=rna4283|organism=Nannochloropsis gaditana|type=mRNA|length=2213bp
CCCACCACCTCCCCTGGTGCCTCTGGCCGAGTGGTTTTGAGCACCATGCA
CGGAGTTAAAGGCCAAGAGTTCGACTTCGTCTTTTTGGCTGGGTGGGACG
AAGGTGTCTTCCCCCTGCTCCCCCGCCCTCCCTCCCTCCCTGCCTCCGCC
CCGACCTCCTCCCCGGCCTTGGCGGAGGAACGGCGCTTGGCCTACGTGGC
ATTGACTCGGGCGCGTCTCAACGCCTGCATCACCTTTACCCACCGCCGGC
GCCTCCCGGGGGGGGCCTGGATCACCACCACCCCGTCGCGGTTTATCGGG
GAAATTCCTCGGCGGTTGGTCCGTCTGCAGGTCTTGGGAAGTGCCCGATT
GCAACGTGGGATCCGTCCGAGCAACGACGTGGATTTTCGACGCTGGCGTC
CCACGGGGGTGAGGACTCGCCAGGATGGGTTGTTGGTGGAGCCGTGGCGG
CGAGGGCGGGAGGGAGGGCGGGAGGGAGGGGGGCCGGAAGACGGAATGAG
CGAGGGCGGGGGAAAGGGAGCAGTCGGCTCGAACGGGATGGAAGAAGCGC
GGGTGGAGGAAGGGCGAGGGGGAGGGCGAAGGGAAAGCACGACGTCCGGA
GGGCTTCAGGCGCAGGCTATGGCAAAGGAAAGCACGACGTCCGGAGGGCT
TCAGGCGCAGGCTATATCAAAGGAGGGAGGGGAGAAGGGCGAGGGACAGC
CCGCCGCCGCTGCTGCAGAGAGCCTGGATCCAAACCCATCTCTCCCCTCC
TCGACCCCAGCAGTAGTGCAAGCTGCCGGGACAAGAACGACTCCCCCAAC
CACGTCTCGCACAAGCAGTCGCAGAGCTACCCAGCCAGCACCCTTGCTGC
CGCTGTCGCCTACCGCCTGCGGGAAGCCTTCGGCCACAGAGGACCTCAGC
CCCGCCCTCCCCGCCCACGTCCTGCGTGACGACGCCGAGGTGCCCAGCCT
CATTATCCTCTCCCCCACCGACGAACTTTCCCTCAGCCCGCACGCCGTTG
CCACTGCTGCCCGTGCCGTAGCGACCACGGCCGCCATTGCGAAGGGCATG
GTGCTGGAGGAAGGTGGGAGGGAGGAAGGGGGGGAGGGCGGGAAGGAGGG
CAAGTCGCGGCAGAGGCAAAGACAACGGACTCAACGCCGGCTCGCTTCTT
CGTCCCCGAGCACGGGGACGGCGAAAAGCCCGATCGTTAAAGCCCGAGCG
GCCCCGGACGTGCTTCCCTCCCTCCAGGCCCTCCTCTCCGACCCGGCCGT
GCTCCGAAAACAACTCCGCCCCTTCTACCGCGCCTGTATTCAGGCAACAG
GGCATACCTTGAACGCCCTTCCGGCGCGGGAGAACCCCCGCTGTCGCCTT
CCCCTCTCTCAGACCCCGACCCACCATTTGGGCCTCCTGGCAGTGGCTTA
TTTGACGTCCGATCGGAGCCTCGTCGCACGGGAGGGGTGGGGGGCGCTTC
GCCGCCTTTTTCGCGCCATTTTGGGCGTCTATGGGATGACACGTGGGAAA
GTGCCCGTCTGGGAGAAAGGCGGACGGGGGCAGGTGGGAGGGAGAGAGGA
AGGGGAAGGAAAAAACGCGGCCAAGTTGAAGTCGGTCTGGCGGTGCGGCG
GCGAGGAGCTTGGCGACGTGTTGCTGGCCCTGTTGGCGCAGGAGGAAGGG
TACCTCCAGGTCCAGGGGGAGAGCGGAGGGAAGGTCAGGCAGGGGAAAAG
CTCAGGGCAGGGAGGAAAAGGGAGCAAAGTAGGAGGGAGGAAGGGAAGGG
AGGGTAGCAACGGTCAGGAATTTGGGTCTTAAGCCGAGGGAGTCACTGTA
TTTTGGTGCGTGACAACGCCTGTAGGATGGTAAACAGATAAGATGCAGAT
AAGAGACAGTAACACTGAGGTAAAATTCTGAAAATATAGACGAAGTATGT
TCACCGCGTAAGTGTACGATACGAGCAGCATACGTATTGTTTGTCATGGC
ATGGAAGAAAGGCACTTGGATGTACTCCCACTGGGAAAAGGCCGAGCATA
TTTGAAAAAAAAAACCGACGATCGCCGACTCTTTCGACGCCTTCCTGTGT
GGAGCGAGGGACCACCGTTGCAGGATTTTAAAACAAGCAAGAGGTGCGTT
TTGAAAAAGAACATTCAAGAATGAAAGCAAACCCTTCTCACAGGACCAGG
GGGTGGACAGAGTACCGTTTTGATGTGAGGTTGATTTAAAAGTCCGATGG
CGGGATGAGTAAC back to topprotein sequence of rna4283 >rna4283-protein ID=rna4283-protein|Name=rna4283|organism=Nannochloropsis gaditana|type=polypeptide|length=495bp
MVWLNQGTVCQTKPTTRHDTFDSVMKPSLALPSLLATLHFLFLLPPSSPS
AWDPHPWPSTPPYVEGWYVRLSGLETGDSIALIFGASLLPPAPPPSLPPV
YLAILHGDVLTNKTVVYESTPPLEAVEIRQKNGQPVTEAVDWKAPPGFTW
RVIDEAEDGAARQAPQGSKSTTSSFSPEASSSMNAIQRARHLFLRVTLPT
AAFWAQIDIPPWKYDGPPRPHSWTDVVDAVPLHWYIHSLSSRVVYARLEL
KEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQG
VASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTPGVFTHFAHF
RDQDLGLAWDFKPSSSVLVEESVEGCQGRARFVLEGWGAEEQEGGGGDGE
AFHPSLAPRSQGRRRLSLELVKPRGSSACLLGPTGTGFERLCEESFQGEA
RVEAAKEGGKEGGWRVRQWRRVLPIAPSLCMDSRVRNLVMECKEL back to topmRNA from alignment at CM002463.1:176908..179215- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4283 ID=rna4283|Name=rna4283|organism=Nannochloropsis gaditana|type=mRNA|length=2308bp|location=Sequence derived from alignment at CM002463.1:176908..179215- (Nannochloropsis gaditana)
ATGGTCTGGTTGAACCAGGGCACTGTCTGTCAAACAAAGCCAACCACCCG
ACACGATACGTGACTCTCAATCTTTTATGCGTTGCTTGATGATGCCTAGG
AACCACAATCCTTGCTCGGCAAAGCCATGCACAGACGAGGGTGTTACATA
TTACTTGGTTGATTTGGCTCGATCCCTACCTCCTGCTTGGACATACCCAT
TACCAAACAAAAGTAAAAGGAAAAAAGGGGATCATGTCCACCATGCTCTC
ACTCACCCACAACAAGTACGGCATGCATATTATTACGAATATGGAGACTT
TGACGACGGTGTACTTATGTTACGGCTTCGCCCTTTCAAACCCGTTTTGT
TGTGTTTCTCTCAGTAACGTCATTCCTCATCGGTGCCCCGGGGAGGTAAA
GTGAAGACCTGCGGGGCTTTCATACAACTGCATTCGAAGTGCATGTCCAT
CCCGCATATTCGACGTACACACGCCTCACGAATGTGGACACGACGCACAC
ATCTCTGTGATTGAACACGGGGGGTTCGAATTAATTTTGCCCTTTTGTCT
TCTTCCCTTTCCTTATAGCTTTGACAGCGTCATGAAGCCCTCCCTCGCCC
TCCCGAGTCTTTTGGCAACGCTCCACTTCCTCTTTCTCCTTCCGCCCTCC
TCACCCTCTGCATGGGATCCACATCCCTGGCCATCAACTCCTCCGTATGT
GGAAGGCTGGTATGTGCGCCTCTCAGGTCTGGAGACTGGCGATTCCATTG
CCCTTATTTTCGGTGCCTCCCTCCTCCCGCCTGCCCCTCCTCCCTCTCTC
CCTCCTGTCTATCTGGCCATCCTCCATGGCGATGTCTTGACCAACAAGAC
TGTTGTGTACGAAAGCACGCCACCGTTGGAGGCGGTGGAGATACGGCAGA
AGAACGGCCAGCCCGTCACAGAGGCTGTCGATTGGAAGGCTCCTCCGGGA
TTCACTTGGCGGGTGATAGATGAAGCAGAGGATGGAGCCGCAAGGCAGGC
GCCCCAGGGCAGCAAAAGCACGACTTCTTCCTTCTCTCCCGAGGCGTCTT
CCTCCATGAACGCCATTCAAAGGGCTCGCCACTTGTTCCTCCGAGTGACC
CTCCCCACGGCCGCCTTCTGGGCCCAGATCGACATCCCTCCCTGGAAGTA
CGACGGTCCCCCGCGTCCTCACTCGTGGACCGACGTCGTGGACGCTGTCC
CCTTACACTGGTACATTCATTCCCTCTCTTCCCGGGTCGTGTACGCCCGC
TTGGAGTTGAAAGAGGAGGGGAGGCAGGAGGGGGGGAGGGCGGTGGAGGG
GAAGGGAGGAGGGAGGGGAAAGAGGATAATCGAAAGTCACAGAGGACAGG
TGCATTTGGAGAAGAATTGGGGTAGACGCTTTCCCGATGCATGGCTTTGG
TCCCAGGGCGTGGCATCGCTCCCTCTCTCTGACCCGTCCTCCTCCCCCTC
CCCCTCGACCTCCCCCTCGACCTCGTCCACCCGGAATGCTTCCTCCATCG
CCTTCGTCTTCTCCTATGGGCAGGTCACCCCGGGGGTCTTTACCCATTTC
GCGCATTTTCGTGACCAAGACCTGGGTCTAGCTTGGGATTTCAAGCCGAG
CTCCTCGGTCTTGGTGGAGGAGAGCGTGGAGGGATGCCAAGGTCGGGCCC
GCTTCGTCCTGGAGGGGTGGGGAGCGGAGGAGCAGGAGGGCGGGGGGGGG
GACGGGGAGGCGTTCCATCCTTCCCTCGCTCCTCGTTCTCAGGGCCGTAG
ACGGTTGAGCTTGGAGCTGGTCAAGCCCAGGGGTTCGTCGGCGTGTCTGC
TGGGACCGACCGGGACAGGATTTGAACGTTTGTGCGAGGAATCGTTCCAG
GGGGAGGCGCGGGTGGAGGCAGCGAAGGAGGGGGGAAAGGAGGGAGGTTG
GCGCGTGGTGAGAGAGGCAGTCTTGAGTGGAGTGGCCGTGGAGCTGGGAG
GGACGATGCGGTGCGAGGGCCGGTGTGAGGATGAGGAAGGAAGGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGAAGGAAGGGTCGCGTAGGCGGGGAAGGG
ACAGAAAGGATCGCAGCAAGGAAAAGGAAGAGCGAGACAAATTATCTGAG
AAGAAAAGGAATGTACAATCGTGGAAGAGGGGGGAGAGGGCAAAGGGGCA
GGAGGAGGAAGACGGGCGTGCGGGGGGAGTGAGACCATGGTGAGGGAGGG
GGAGGTCGGGGAAGCCAGAGACAGTGGAGGCGTGTCCTACCAATCGCGCC
GTCGTTGTGCATGGATAGCAGGGTAAGAAACCTTGTAATGGAGTGTAAAG
AGCTGTGA back to topCoding sequence (CDS) from alignment at CM002463.1:176908..179215- >rna4283 ID=rna4283|Name=rna4283|organism=Nannochloropsis gaditana|type=CDS|length=4464bp|location=Sequence derived from alignment at CM002463.1:176908..179215- (Nannochloropsis gaditana)
AGACAGTGGAGGCGTGTCCTACCAATCGCGCCGTCGTTGTGCATGGATAG
CAGGGTAAGAAACCTTGTAATGGAGTGTAAAGAGCTGTGACTTTGACAGC
GTCATGAAGCCCTCCCTCGCCCTCCCGAGTCTTTTGGCAACGCTCCACTT
CCTCTTTCTCCTTCCGCCCTCCTCACCCTCTGCATGGGATCCACATCCCT
GGCCATCAACTCCTCCGTATGTGGAAGGCTGGTATGTGCGCCTCTCAGGT
CTGGAGACTGGCGATTCCATTGCCCTTATTTTCGGTGCCTCCCTCCTCCC
GCCTGCCCCTCCTCCCTCTCTCCCTCCTGTCTATCTGGCCATCCTCCATG
GCGATGTCTTGACCAACAAGACTGTTGTGTACGAAAGCACGCCACCGTTG
GAGGCGGTGGAGATACGGCAGAAGAACGGCCAGCCCGTCACAGAGGCTGT
CGATTGGAAGGCTCCTCCGGGATTCACTTGGCGGGTGATAGATGAAGCAG
AGGATGGAGCCGCAAGGCAGGCGCCCCAGGGCAGCAAAAGCACGACTTCT
TCCTTCTCTCCCGAGGCGTCTTCCTCCATGAACGCCATTCAAAGGGCTCG
CCACTTGTTCCTCCGAGTGACCCTCCCCACGGCCGCCTTCTGGGCCCAGA
TCGACATCCCTCCCTGGAAGTACGACGGTCCCCCGCGTCCTCACTCGTGG
ACCGACGTCGTGGACGCTGTCCCCTTACACTGGTACATTCATTCCCTCTC
TTCCCGGGTCGTGTACGCCCGCTTGGAGTTGAAAGAGGAGGGGAGGCAGG
AGGGGGGGAGGGCGGTGGAGGGGAAGGGAGGAGGGAGGGGAAAGAGGATA
ATCGAAAGTCACAGAGGACAGGTGCATTTGGAGAAGAATTGGGGTAGACG
CTTTCCCGATGCATGGCTTTGGTCCCAGGGCGTGGCATCGCTCCCTCTCT
CTGACCCGTCCTCCTCCCCCTCCCCCTCGACCTCCCCCTCGACCTCGTCC
ACCCGGAATGCTTCCTCCATCGCCTTCGTCTTCTCCTATGGGCAGGTCAC
CCCGGGGGTCTTTACCCATTTCGCGCATTTTCGTGACCAAGACCTGGGTC
TAGCTTGGGATTTCAAGCCGAGCTCCTCGGTCTTGGTGGAGGAGAGCGTG
GAGGGATGCCAAGGTCGGGCCCGCTTCGTCCTGGAGGGGTGGGGAGCGGA
GGAGCAGGAGGGCGGGGGGGGGGACGGGGAGGCGTTCCATCCTTCCCTCG
CTCCTCGTTCTCAGGGCCGTAGACGGTTGAGCTTGGAGCTGGTCAAGCCC
AGGGGTTCGTCGGCGTGTCTGCTGGGACCGACCGGGACAGGATTTGAACG
TTTGTGCGAGGAATCGTTCCAGGGGGAGGCGCGGGTGGAGGCAGCGAAGG
AGGGGGGAAAGGAGGGAGGTTGGCGCGTGATGGTCTGGTTGAACCAGGGC
ACTGTCTGTCAAACAAAGCCAACCACCCGACACGATACAGACAGTGGAGG
CGTGTCCTACCAATCGCGCCGTCGTTGTGCATGGATAGCAGGGTAAGAAA
CCTTGTAATGGAGTGTAAAGAGCTGTGACTTTGACAGCGTCATGAAGCCC
TCCCTCGCCCTCCCGAGTCTTTTGGCAACGCTCCACTTCCTCTTTCTCCT
TCCGCCCTCCTCACCCTCTGCATGGGATCCACATCCCTGGCCATCAACTC
CTCCGTATGTGGAAGGCTGGTATGTGCGCCTCTCAGGTCTGGAGACTGGC
GATTCCATTGCCCTTATTTTCGGTGCCTCCCTCCTCCCGCCTGCCCCTCC
TCCCTCTCTCCCTCCTGTCTATCTGGCCATCCTCCATGGCGATGTCTTGA
CCAACAAGACTGTTGTGTACGAAAGCACGCCACCGTTGGAGGCGGTGGAG
ATACGGCAGAAGAACGGCCAGCCCGTCACAGAGGCTGTCGATTGGAAGGC
TCCTCCGGGATTCACTTGGCGGGTGATAGATGAAGCAGAGGATGGAGCCG
CAAGGCAGGCGCCCCAGGGCAGCAAAAGCACGACTTCTTCCTTCTCTCCC
GAGGCGTCTTCCTCCATGAACGCCATTCAAAGGGCTCGCCACTTGTTCCT
CCGAGTGACCCTCCCCACGGCCGCCTTCTGGGCCCAGATCGACATCCCTC
CCTGGAAGTACGACGGTCCCCCGCGTCCTCACTCGTGGACCGACGTCGTG
GACGCTGTCCCCTTACACTGGTACATTCATTCCCTCTCTTCCCGGGTCGT
GTACGCCCGCTTGGAGTTGAAAGAGGAGGGGAGGCAGGAGGGGGGGAGGG
CGGTGGAGGGGAAGGGAGGAGGGAGGGGAAAGAGGATAATCGAAAGTCAC
AGAGGACAGGTGCATTTGGAGAAGAATTGGGGTAGACGCTTTCCCGATGC
ATGGCTTTGGTCCCAGGGCGTGGCATCGCTCCCTCTCTCTGACCCGTCCT
CCTCCCCCTCCCCCTCGACCTCCCCCTCGACCTCGTCCACCCGGAATGCT
TCCTCCATCGCCTTCGTCTTCTCCTATGGGCAGGTCACCCCGGGGGTCTT
TACCCATTTCGCGCATTTTCGTGACCAAGACCTGGGTCTAGCTTGGGATT
TCAAGCCGAGCTCCTCGGTCTTGGTGGAGGAGAGCGTGGAGGGATGCCAA
GGTCGGGCCCGCTTCGTCCTGGAGGGGTGGGGAGCGGAGGAGCAGGAGGG
CGGGGGGGGGGACGGGGAGGCGTTCCATCCTTCCCTCGCTCCTCGTTCTC
AGGGCCGTAGACGGTTGAGCTTGGAGCTGGTCAAGCCCAGGGGTTCGTCG
GCGTGTCTGCTGGGACCGACCGGGACAGGATTTGAACGTTTGTGCGAGGA
ATCGTTCCAGGGGGAGGCGCGGGTGGAGGCAGCGAAGGAGGGGGGAAAGG
AGGGAGGTTGGCGCGTGATGGTCTGGTTGAACCAGGGCACTGTCTGTCAA
ACAAAGCCAACCACCCGACACGATACAGACAGTGGAGGCGTGTCCTACCA
ATCGCGCCGTCGTTGTGCATGGATAGCAGGGTAAGAAACCTTGTAATGGA
GTGTAAAGAGCTGTGACTTTGACAGCGTCATGAAGCCCTCCCTCGCCCTC
CCGAGTCTTTTGGCAACGCTCCACTTCCTCTTTCTCCTTCCGCCCTCCTC
ACCCTCTGCATGGGATCCACATCCCTGGCCATCAACTCCTCCGTATGTGG
AAGGCTGGTATGTGCGCCTCTCAGGTCTGGAGACTGGCGATTCCATTGCC
CTTATTTTCGGTGCCTCCCTCCTCCCGCCTGCCCCTCCTCCCTCTCTCCC
TCCTGTCTATCTGGCCATCCTCCATGGCGATGTCTTGACCAACAAGACTG
TTGTGTACGAAAGCACGCCACCGTTGGAGGCGGTGGAGATACGGCAGAAG
AACGGCCAGCCCGTCACAGAGGCTGTCGATTGGAAGGCTCCTCCGGGATT
CACTTGGCGGGTGATAGATGAAGCAGAGGATGGAGCCGCAAGGCAGGCGC
CCCAGGGCAGCAAAAGCACGACTTCTTCCTTCTCTCCCGAGGCGTCTTCC
TCCATGAACGCCATTCAAAGGGCTCGCCACTTGTTCCTCCGAGTGACCCT
CCCCACGGCCGCCTTCTGGGCCCAGATCGACATCCCTCCCTGGAAGTACG
ACGGTCCCCCGCGTCCTCACTCGTGGACCGACGTCGTGGACGCTGTCCCC
TTACACTGGTACATTCATTCCCTCTCTTCCCGGGTCGTGTACGCCCGCTT
GGAGTTGAAAGAGGAGGGGAGGCAGGAGGGGGGGAGGGCGGTGGAGGGGA
AGGGAGGAGGGAGGGGAAAGAGGATAATCGAAAGTCACAGAGGACAGGTG
CATTTGGAGAAGAATTGGGGTAGACGCTTTCCCGATGCATGGCTTTGGTC
CCAGGGCGTGGCATCGCTCCCTCTCTCTGACCCGTCCTCCTCCCCCTCCC
CCTCGACCTCCCCCTCGACCTCGTCCACCCGGAATGCTTCCTCCATCGCC
TTCGTCTTCTCCTATGGGCAGGTCACCCCGGGGGTCTTTACCCATTTCGC
GCATTTTCGTGACCAAGACCTGGGTCTAGCTTGGGATTTCAAGCCGAGCT
CCTCGGTCTTGGTGGAGGAGAGCGTGGAGGGATGCCAAGGTCGGGCCCGC
TTCGTCCTGGAGGGGTGGGGAGCGGAGGAGCAGGAGGGCGGGGGGGGGGA
CGGGGAGGCGTTCCATCCTTCCCTCGCTCCTCGTTCTCAGGGCCGTAGAC
GGTTGAGCTTGGAGCTGGTCAAGCCCAGGGGTTCGTCGGCGTGTCTGCTG
GGACCGACCGGGACAGGATTTGAACGTTTGTGCGAGGAATCGTTCCAGGG
GGAGGCGCGGGTGGAGGCAGCGAAGGAGGGGGGAAAGGAGGGAGGTTGGC
GCGTGATGGTCTGGTTGAACCAGGGCACTGTCTGTCAAACAAAGCCAACC
ACCCGACACGATAC back to top
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