EWM26397.1, cds4273 (CDS) Nannochloropsis gaditana

Overview
NameEWM26397.1
Unique Namecds4273
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:179157..179215 -
Alignment locationCM002463.1:177309..178647 -
Alignment locationCM002463.1:176908..176997 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26397.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100365g5.933.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:179157..179215 -
CM002463.1supercontigCM002463.1:177309..178647 -
CM002463.1supercontigCM002463.1:176908..176997 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM26397.1 vs. NCBI_GenBank
Match: gi|585108414|gb|EWM26397.1| (hypothetical protein Naga_100365g5 [Nannochloropsis gaditana])

HSP 1 Score: 1002.66 bits (2591), Expect = 0.000e+0
Identity = 495/495 (100.00%), Postives = 495/495 (100.00%), Query Frame = 0
Query:    1 MVWLNQGTVCQTKPTTRHDTFDSVMKPSLALPSLLATLHFLFLLPPSSPSAWDPHPWPSTPPYVEGWYVRLSGLETGDSIALIFGASLLPPAPPPSLPPVYLAILHGDVLTNKTVVYESTPPLEAVEIRQKNGQPVTEAVDWKAPPGFTWRVIDEAEDGAARQAPQGSKSTTSSFSPEASSSMNAIQRARHLFLRVTLPTAAFWAQIDIPPWKYDGPPRPHSWTDVVDAVPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTPGVFTHFAHFRDQDLGLAWDFKPSSSVLVEESVEGCQGRARFVLEGWGAEEQEGGGGDGEAFHPSLAPRSQGRRRLSLELVKPRGSSACLLGPTGTGFERLCEESFQGEARVEAAKEGGKEGGWRVRQWRRVLPIAPSLCMDSRVRNLVMECKEL 495
            MVWLNQGTVCQTKPTTRHDTFDSVMKPSLALPSLLATLHFLFLLPPSSPSAWDPHPWPSTPPYVEGWYVRLSGLETGDSIALIFGASLLPPAPPPSLPPVYLAILHGDVLTNKTVVYESTPPLEAVEIRQKNGQPVTEAVDWKAPPGFTWRVIDEAEDGAARQAPQGSKSTTSSFSPEASSSMNAIQRARHLFLRVTLPTAAFWAQIDIPPWKYDGPPRPHSWTDVVDAVPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTPGVFTHFAHFRDQDLGLAWDFKPSSSVLVEESVEGCQGRARFVLEGWGAEEQEGGGGDGEAFHPSLAPRSQGRRRLSLELVKPRGSSACLLGPTGTGFERLCEESFQGEARVEAAKEGGKEGGWRVRQWRRVLPIAPSLCMDSRVRNLVMECKEL
Sbjct:    1 MVWLNQGTVCQTKPTTRHDTFDSVMKPSLALPSLLATLHFLFLLPPSSPSAWDPHPWPSTPPYVEGWYVRLSGLETGDSIALIFGASLLPPAPPPSLPPVYLAILHGDVLTNKTVVYESTPPLEAVEIRQKNGQPVTEAVDWKAPPGFTWRVIDEAEDGAARQAPQGSKSTTSSFSPEASSSMNAIQRARHLFLRVTLPTAAFWAQIDIPPWKYDGPPRPHSWTDVVDAVPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTPGVFTHFAHFRDQDLGLAWDFKPSSSVLVEESVEGCQGRARFVLEGWGAEEQEGGGGDGEAFHPSLAPRSQGRRRLSLELVKPRGSSACLLGPTGTGFERLCEESFQGEARVEAAKEGGKEGGWRVRQWRRVLPIAPSLCMDSRVRNLVMECKEL 495          
BLAST of EWM26397.1 vs. NCBI_GenBank
Match: gi|551541122|ref|XP_005758884.1| (hypothetical protein EMIHUDRAFT_121299 [Emiliania huxleyi CCMP1516] >gi|485606733|gb|EOD06455.1| hypothetical protein EMIHUDRAFT_121299 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 85.8853 bits (211), Expect = 1.947e-14
Identity = 106/408 (25.98%), Postives = 145/408 (35.54%), Query Frame = 0
Query:   55 HPWPSTPPYVEGWYVRLSGLETGDSIALIFGASLLPPAPPPS---LPPVYLAILHGDVLTNKTVVYESTPPLEAVEIRQKNGQPVTEAVDWKAPPGFTWRVIDEAEDGAARQAPQGSKSTTSSFSPEASSSMNAIQRARHLFLRVTLPTAAFWAQID-IPPWKYDGPPRPHSWTDVVDAVPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTPGVFTHFAHFRDQDLGLAWDFKPSSSVLVEESVEGCQGRARFVLEGWGAEEQEGGGGDGEAFHPSLAPRSQGRRRLSLELVKPRGSSACLLGPTGTGFERLCEESFQGEARVEAAKEG 458
            +P    PP+ EGWY R+  +    S  +IFG      A       LP  Y+A+L    +     V+   P    V I    GQPV    D + PP F WR                            SS+   I  A    + +T     F A++D   PW   G       + +   +PLHW+++SL SRV                R V     G     +++     H EKN G+ FP +W WSQ +                  +TS    A S   +F    + P     + H      G+A DF P++  L  E V GC G  R V                   HP       G R  +    +P     CLLGPT TGF  +C ES+   A V   + G
Sbjct:   61 YPSFCKPPFFEGWYTRI--IAESKSFGVIFGHVFAGSAGDSGKGPLPTTYVALLRAADVGEPMEVHNCYPNGRNVTI---GGQPVNSPPDVQGPPAFEWR----------------------------SSAGAFIVTAEETSIDITCDGVRFVAELDGATPWSAGGYGPGGRLSQL--PLPLHWFVYSLRSRVR---------------RYVWSSTAGVSDEGVDA---WAHQEKNHGKAFPSSWTWSQAL-----------------DTTSGAALALSGGPLFE--GLPPAYLVGYRH--PAGSGIAIDFAPANGKLSAE-VNGCDGSLRLV-----------------GTHPLT-----GHRLEANVTARPSELRRCLLGPTATGFAPVCVESYAANASVAVYQWG 371          
BLAST of EWM26397.1 vs. NCBI_GenBank
Match: gi|390343827|ref|XP_003725972.1| (PREDICTED: uncharacterized protein LOC100893860 [Strongylocentrotus purpuratus])

HSP 1 Score: 82.0333 bits (201), Expect = 2.890e-13
Identity = 97/434 (22.35%), Postives = 162/434 (37.33%), Query Frame = 0
Query:   38 LHFLFLL----PPSSPSAWDPHPWPSTPPYVEGWYVRLSGLETGDSIALIFGASLLPPAPP---------PSLPPVYLAILHGDVLTNKTVVYESTPPLEAVEIRQKNGQPVTEAVDWKAPPGFTWRVIDEAEDGAARQAPQGSKSTTSSFSPEASSSMNAIQRARHLFLRVTLPTAAFWAQIDIPPWKYDGPPRPHSWTDVVDAVPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTPGVFTHFAHFRDQDLGLAWDFKPSSSVLVEESVEGCQGRARFVLEGWGAEEQEGGGGDGEAFHPSLAPRSQGRRRLSLELVKPRGSSACLLGPTGTGFERLCEESFQGEARVEAAKEG 458
            ++FL L+      +  S +DPH +P T P+ EGWY RL+  +   S  ++FG  +LP              S P  Y++++      +  VV ++ P  + +E+  + G+P+ +    +AP  F + V            P G  + T + S   S +++ +  A + F R  L             W   G   P  W   +  +P+HW+++SL +   Y           + GR + GK                H EKNWG+ FP  W+W+Q                     T++   A +   V S+  V  G   H   +R+    L  DF+P +S   ++    C+G+A   +       +       E F                          CL GP  +GF+    E++    RV   K G
Sbjct:    1 MYFLVLILCVVVINDASQYDPHLYPPTGPFFEGWYTRLTDTDNDRSFGVLFG-RVLPRNSQSTSTSTSTWDSNPTTYISLVCSKGQGSPMVVVQAYPDEDDIEVTVRGGRPINKDPSLQAPSYFEYVV-----------RPYGFYNVTPN-STVFSFTIDGVTFAGN-FTRPLL-------------WDSTG-QGPEGWLTDLPMLPIHWFVYSLGTPGSYT--------WNQSGRVISGK-------------AHAHQEKNWGQGFPAGWMWTQAYN-----------------RTANATFAGTFG-VVSFNPVIRGP-AHLFGYRNFARNLRLDFRPDNSFTTQDR-RPCEGKATVNIYSLLHTVELTMSAPVETFQ------------------------KCLRGPVESGFQYNLVETYVATIRVVIKKLG 341          
BLAST of EWM26397.1 vs. NCBI_GenBank
Match: gi|524902463|ref|XP_005107479.1| (PREDICTED: uncharacterized protein LOC101859266 [Aplysia californica] >gi|524902469|ref|XP_005107481.1| PREDICTED: uncharacterized protein LOC101859266 [Aplysia californica] >gi|871260074|ref|XP_012943011.1| PREDICTED: uncharacterized protein LOC101859266 [Aplysia californica] >gi|871260079|ref|XP_012943012.1| PREDICTED: uncharacterized protein LOC101859266 [Aplysia californica])

HSP 1 Score: 80.1073 bits (196), Expect = 1.413e-12
Identity = 109/460 (23.70%), Postives = 172/460 (37.39%), Query Frame = 0
Query:   36 ATLHFLFLLPPSSP-----SAWDPHPWPSTPPYVEGWYVRLSGLETGDSIALIFGASLLPPAPPPSLP--------------------PVYLAILHGDV-LTNKTVVYESTPP--LEAVE--------IRQKNGQPVTEAVDWKAPPGFTWRVIDEAEDGAARQAPQGSKSTTSSFSPEASSSMNAIQRARHLFLRVTLPTAAFWAQIDIPPWKYDGPPRPHSWTDVVDAVPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQ---VHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTP---GVFTHFAHFRDQDLGLAWDFKPSSSVLVEESVEGCQGRARFVLEGWGAEEQEGGGGDGEAFHPSLAPRSQGRRRLSLELVKPRGS-SACLLGPTGTGFERLCEESFQGEARV 452
             +LH + ++  + P     +  DPH +P   P+ EGWY+R+       S   +FG  +LP     S+P                     V    ++G + L   +++  S P   L+AV         +  K G+PV E  D   PP F  ++ D          P G   TT S +              ++ LR +  +          PW  +G   P  W + +  +P+HW+++SL S VV+     K  G+   G                 H G     H+EK+WG+ FP AW+WS+GV      DP                  ++++F  S G VT     +    + +R+ + G+   F P++SV    S +GC   A  V E                             ++  +L  P GS S CL  P   GF   C ES++  A +
Sbjct:   11 TSLHLMMIMLAAFPGLCWGNQMDPHVYPDQGPFFEGWYMRIIDAGNERSFGWLFG-RVLPTKSASSVPCEDESLKLLFTSERCKEVRDNVKNNFMNGSLPLVYSSLLINSGPKSKLQAVTGFFEPEDYVITKKGKPVEENPDDATPPSFEAKIGDNV---TFVVKPSG---TTFSLT------------VGNIVLRGSTSSPV--------PWGPNGE-GPEGWLEYL-PLPIHWFVYSLRSNVVHYEYINKLTGQTLSG---------------PDHNGVPVVAHMEKDWGKSFPKAWIWSEGV------DP-----------------WTNVSFAISSGIVTELGVDLKAQLSGYRNPNKGIHCSFSPANSVHHLTS-DGCSNTATLVSESLEC-------------------------KVIYQLSAPLGSFSDCLFTPQYKGFRPGCLESYRAVANI 377          
BLAST of EWM26397.1 vs. NCBI_GenBank
Match: gi|1129180296|gb|OLP87889.1| (putative tyrosinase-like protein tyr-3 [Symbiodinium microadriaticum])

HSP 1 Score: 74.7146 bits (182), Expect = 1.877e-10
Identity = 89/334 (26.65%), Postives = 123/334 (36.83%), Query Frame = 0
Query:   50 SAWDPHPWPSTPPYVEGWYVRLSGLETGDSIALIFGASLLPPAPPPSLPPVYLAILHGDVLTNKTVVYESTPPLEAVEIRQKNGQPVTEAVDWKAPPGFTWRVIDEAEDGAARQAPQGSKSTTSSFSPEASSSMNAIQRARHLFLRVTLPTAAFWAQIDIPPWKYDGPPRPHSWTDVVDAVPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTPGVF----THFAHFRDQDLGLAWDFKPSSSVLVEESVEGCQGR 379
            S +DPH  P   P+ EGWY R+S   TG S+ LI G    P     S    YLA++  D    KT V E+ PP   V    K+G  +    D  + P F         +G       G++   S + P       A          +T P           PW   G   P  W   +  + LHW+++SLSS   Y RLE                       ++  H G+ H EKNWG+ FP +W W +G+                       + AS IA  F+ G V  G       +    R   L   W+F P    +   S + C+GR
Sbjct:  139 SQYDPH-LPQKSPWFEGWYTRISETPTGQSVGLIVGH--YPEKAQLSDAAAYLALII-DEGKGKTTVVEANPPGLTV---LKHGAAIANEPDDASEPDFEV----SGGNGTLMMKQTGTQQRISMWFPSQGFRFEA---------NLTDPV----------PWSSSGQ-SPEGWAGKLPFLALHWFVYSLSSHASY-RLE-------------------SPTGVVLGH-GRAHQEKNWGQSFPKSWTWGEGL-----------------------QGASKIA--FAGGTVPLGPLKVPDAYLLGLRTSKLN--WNFHPQDPAVFWVSNDACRGR 393          
BLAST of EWM26397.1 vs. NCBI_GenBank
Match: gi|1003335580|emb|CDU25356.1| (uncharacterized protein SPSC_05190 [Sporisorium scitamineum])

HSP 1 Score: 62.7734 bits (151), Expect = 8.302e-7
Identity = 45/164 (27.44%), Postives = 78/164 (47.56%), Query Frame = 0
Query:  220 PHSWTDVVDA-VPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVTPGVFTHFAHFRDQDLGLAWDFKPSSSVLVEESVEGCQGRARF 382
            P  W   + A +PLHWY+HS S+   ++   +      +  R  +          + + RG +H+EKNWG+ FP  W+W+ G +SLP  DP S PS +++PS   +    SI  + ++      V  H  H ++ +    W F P +++  + S+     R  +
Sbjct:  340 PEGWIQHLGALIPLHWYVHSSSAPATFSLEHVAFSSTPDEDRVPQLDDA------VAAGRGLLHVEKNWGQAFPSGWMWAHGASSLP--DP-SVPSSTSAPSVRLSLAGGSILGLTAF-----LVGIHITHDKEYN----WTFAPPTALGPQVSLPSGSTRVHY 485          
BLAST of EWM26397.1 vs. NCBI_GenBank
Match: gi|827763063|gb|KLO17662.1| (hypothetical protein SCHPADRAFT_155174 [Schizopora paradoxa])

HSP 1 Score: 62.3882 bits (150), Expect = 9.234e-7
Identity = 49/162 (30.25%), Postives = 72/162 (44.44%), Query Frame = 0
Query:  230 VPLHWYIHSLSSRVVYARLELKEEGRQEGGRAVEGKGGGRGKRIIESHRGQVHLEKNWGRRFPDAWLWSQGVASLPLSDPSSSPSPSTSPSTSSTRNASSIAFVFSYGQVT--PGVFTHFAHFRDQDLGLAWDF-KPSSSVLV--EESVEGCQGRARFVLEG 386
            +PLHW+I S  S   Y    ++   R++G          R +  +    G  H+EKNWG  FP+ W W QG           SP+PS+  S S  R  S++AF    G  T  P + ++   +R     + WDF  P +S +     S+ G   R RF  +G
Sbjct:  182 IPLHWHIFSTHSLASYLITRVRRIYREDGSYR-------RDENTVAEGSGFAHVEKNWGDGFPEGWTWGQGF----------SPTPSSHASASYDRPTSTLAFA---GGTTGFPFLKSYLVIYRSPSKNILWDFAAPWTSFIAAGNTSLFGPFVRERFNHDG 323          
The following BLAST results are available for this feature:
BLAST of EWM26397.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 7
Match NameE-valueIdentityDescription
gi|585108414|gb|EWM26397.1|0.000e+0100.00hypothetical protein Naga_100365g5 [Nannochloropsi... [more]
gi|551541122|ref|XP_005758884.1|1.947e-1425.98hypothetical protein EMIHUDRAFT_121299 [Emiliania ... [more]
gi|390343827|ref|XP_003725972.1|2.890e-1322.35PREDICTED: uncharacterized protein LOC100893860 [S... [more]
gi|524902463|ref|XP_005107479.1|1.413e-1223.70PREDICTED: uncharacterized protein LOC101859266 [A... [more]
gi|1129180296|gb|OLP87889.1|1.877e-1026.65putative tyrosinase-like protein tyr-3 [Symbiodini... [more]
gi|1003335580|emb|CDU25356.1|8.302e-727.44uncharacterized protein SPSC_05190 [Sporisorium sc... [more]
gi|827763063|gb|KLO17662.1|9.234e-730.25hypothetical protein SCHPADRAFT_155174 [Schizopora... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4283rna4283Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications