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Properties
| Property Name | Value |
|---|
| Product | soluble nsf attachment protein receptor |
| Orig transcript id | gnl|cribi|Naga_100003g54.1874.mrna |
| Orig protein id | gnl|cribi|Naga_100003g54.1874 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1064469..1065914 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna428 ID=rna428|Name=rna428|organism=Nannochloropsis gaditana|type=mRNA|length=886bp
ACACATGTCTGGACATATACACCCAATCCTCTTCCAGACAAAGTCATGCG
GAAGCGGCATGAACCCTATGAAAACCGCGCGACATGCATGTGCCCCGCAG
CAACGCGGAAAGCCCGGCATTTCCGCAGAGTCAAACACAAAGAGGCAGTA
AGGTTGCTTATGGGGAGGTCATTCAACAAGTTGTGGGTCAAGAAAAATGA
TGTCGCGATGGTTTAGTAGTGAGGCCAGTCACAGCGCTCGGGTTGAAATG
TAAATTCTTTATGATGCGTAATGGCTCTATATTCGAATGTCTCGCTTTCA
TTTACGAAATGTAAAAAGAGAGAAAACCCGTAAGGGAAAATGATGGAGGA
TATCGGTCACCACATCAAGAACTGATAGAAACACTTGACCTTTCACCAGG
TCTCAAAGCATTCTTTGCTAATCTACAGCTCTTGTTGCTAGCCTGAATAG
CGAGGCCCAGTCCGCCCGCTCTATCGACACTATCTGTCATGTCCTATCCA
GCCTCAGCAGTTGCGCTGTATCGTCGAGTATTGCGCAGCCTGCGCCAATT
TGACGACCCTGGAAAGAAGTGGTACTACCGGAACTGGACGCGCAACAACA
TCGCCACTTTTAATGATGAGGATGATCCGGAGCGGCTCCAGCAGCTTTTG
CAAAAAGGAGAGGAGCATCGCGTCTGGATAATGAAAAAGTACCATTTGAA
GGACATTCCTGGCAATAGATGACTTTGCCCTGGGTGCAGATGACTGTACC
TAGAGGGGACGACTGTTGGTAAGGATACTTTAAAGAGGACAGGTTATGTA
GCACGCTGGACAGACTTGTAAATTGTTTGAAAGAAAAACTTGCAAAAGAG
GGGGCCTCCGCCCACCTTGGCCTAAGACTCTTGCTT back to topprotein sequence of rna428 >rna428-protein ID=rna428-protein|Name=rna428|organism=Nannochloropsis gaditana|type=polypeptide|length=284bp
MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREV
KKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKS
LFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQ
VGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFI
QFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEVFGSGGGDNT
STLTEQPTSDGLARRLRVAARYLRPVAKSMTHIP back to topmRNA from alignment at CM002455.1:1064469..1065914+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna428 ID=rna428|Name=rna428|organism=Nannochloropsis gaditana|type=mRNA|length=1446bp|location=Sequence derived from alignment at CM002455.1:1064469..1065914+ (Nannochloropsis gaditana)
CCCGGGGTCTGGTGCCAACAATCACTCTTCAGGCGATTAAATGTCTGGAA
ATGCGCACAAAAACAGAGAATCATGACCGACATAGAATATTGGGACGGCG
AGCTTTCAAGCAAGCTAGCTGAGTTGGAGCAGACAATTGGCAATCTAAAG
TCCATGCGCGGAGGAGATAAAGAGGCGGTACGTGCAGGCGGTCTAGCGTC
GTGTGTGTATACGAGCGCATAGTTCAAAGCTGGAAATCCAATCGGTTTGC
TAACGTCTATTATAGAAAGAAGGAATAGAGAAGGCTAGGTCTCTCTGCGA
TGGATGTATCATTCCATGTTACAAGCTCTTCGGTCATAGACTGCTTTCAC
TGTCAGAACAGCTTTTATCCCCAAAGTTCAATCAGGATTACTCCCTTTCG
AAATTCCTTTCAAAATTCTCTTCAGGGTATTGCAAAAAGTGAGGCCACCC
TCAAACGAGTACGGGAGGTCAAGAAGGGATACAACTACGAAATGCGCATG
TCGCTGAAGAATGATCCTCGACGCCACGAGTATGCGGAGAAATTGAAGGC
CGTGGACGAGAGGATCGCAGCACTGGAAACGGAACTCAAATGGGCCAAAA
CTGAAGCCAACAAGAAGAGCCTTTTCAAGGGGAGTAAGGGGGCAGACGGG
AGTGGTACTTTGAACGAAAATGCAACCAACGATACCTACTTGACGGAAGC
GAAGAAAATCCAGGACAAGACCgaagcctccctccagtcGGCGCTcggga
tggtggaggcctcGAAGCAGGTGGGTGCAAACaccgtggacgaggtgaaC
AGGCAGAAGGAGCAGATCGCGGAGATCACGGACacggtggaggccatgga
ggacggaCTGACCAGGGCGGACAAACTCATACGGGCCTTTGGCCGGCGCA
TTGCCACCGACAAGTTCATTCAgtttttcttcgtcctcaACTTCGGTTTA
TTAGTGGGTATCATCGTCTGGTACGCTgtcaagaaaggaaaggtcAGGGC
TCCTGAAATTCAtgcccctcccatgcctACGTTCGACGAGGTCTTTGgct
ccggggggggggataacACCTCAACGTTGACTGAACAGCCAACATCCGAT
GGTTTGGCGCGAAGACTGCGAGTAGCGGCCCGGTATTTGCGGCCCGTTGC
TAAGTCGATGACTCACATTCCGTAGCCGtcaaaggcaaaggaggaaaaga
agaaggcttACACCAGTGGCACCGAAATGTTAATAGCTTGATGTTTGCAT
AGATTGTCAAAGTAAATGAAGGTCTAGAGCTTGAAGGTTGCATCTGAAAA
AATCAACAACAGATGGCAAAATCGATCGCATGCTGACCGTCAGGCCTTCA
GAATTACCATCGCACTGCATAGTCCGAGCAGGATGTCCTACACCTCCGAT
CTTTCTCCCATCAATTCCACGTGCTCTCTCGCCGTTTCTCGAAGGC back to topCoding sequence (CDS) from alignment at CM002455.1:1064469..1065914+ >rna428 ID=rna428|Name=rna428|organism=Nannochloropsis gaditana|type=CDS|length=1710bp|location=Sequence derived from alignment at CM002455.1:1064469..1065914+ (Nannochloropsis gaditana)
ATGACCGACATAGAATATTGGGACGGCGAGCTTTCAAGCAAGCTAGCTGA
GTTGGAGCAGACAATTGGCAATCTAAAGTCCATGCGCGGAGGAGATAAAG
AGGCGGGTATTGCAAAAAGTGAGGCCACCCTCAAACGAGTACGGGAGGTC
AAGAAGGGATACAACTACGAAATGCGCATGTCGCTGAAGAATGATCCTCG
ACGCCACGAGTATGCGGAGAAATTGAAGGCCGTGGACGAGAGGATCGCAG
CACTGGAAACGGAACTCAAATGGGCCAAAACTGAAGCCAACAAGAAGAGC
CTTTTCAAGGGGAGTAAGGGGGCAGACGGGAGTGGTACTTTGAACGAAAA
TGCAACCAACGATACCTACTTGACGGAAGCGAAGAAAATCCAGGACAAGA
CCgaagcctccctccagtcGGCGCTcgggatggtggaggcctcGAAGCAG
GTGGGTGCAAACaccgtggacgaggtgaaCAGGCAGAAGGAGCAGATCGC
GGAGATCACGGACacggtggaggccatggaggacggaCTGACCAGGGCGG
ACAAACTCATACGGGCCTTTGGCCGGCGCATTGCCACCGACAAGTTCATT
CAgtttttcttcgtcctcaACTTCGGTTTATTAGTGGGTATCATCGTCTG
GTACGCTgtcaagaaaggaaaggtcAGGGCTCCTGAAATTCAtgcccctc
ccatgcctACGTTCGACGAGGTCTTTGgctccggggggggggataacACC
TCAACGTTGACTGAACAGCCAACATCCGATGGTTTGGCGCGAAGACTGCG
AGTAGCGGCCCGGTATTTGCGGCCCGTTGCTAAGTCGATGACTCACATTC
CGTAGATGACCGACATAGAATATTGGGACGGCGAGCTTTCAAGCAAGCTA
GCTGAGTTGGAGCAGACAATTGGCAATCTAAAGTCCATGCGCGGAGGAGA
TAAAGAGGCGGGTATTGCAAAAAGTGAGGCCACCCTCAAACGAGTACGGG
AGGTCAAGAAGGGATACAACTACGAAATGCGCATGTCGCTGAAGAATGAT
CCTCGACGCCACGAGTATGCGGAGAAATTGAAGGCCGTGGACGAGAGGAT
CGCAGCACTGGAAACGGAACTCAAATGGGCCAAAACTGAAGCCAACAAGA
AGAGCCTTTTCAAGGGGAGTAAGGGGGCAGACGGGAGTGGTACTTTGAAC
GAAAATGCAACCAACGATACCTACTTGACGGAAGCGAAGAAAATCCAGGA
CAAGACCgaagcctccctccagtcGGCGCTcgggatggtggaggcctcGA
AGCAGGTGGGTGCAAACaccgtggacgaggtgaaCAGGCAGAAGGAGCAG
ATCGCGGAGATCACGGACacggtggaggccatggaggacggaCTGACCAG
GGCGGACAAACTCATACGGGCCTTTGGCCGGCGCATTGCCACCGACAAGT
TCATTCAgtttttcttcgtcctcaACTTCGGTTTATTAGTGGGTATCATC
GTCTGGTACGCTgtcaagaaaggaaaggtcAGGGCTCCTGAAATTCAtgc
ccctcccatgcctACGTTCGACGAGGTCTTTGgctccggggggggggata
acACCTCAACGTTGACTGAACAGCCAACATCCGATGGTTTGGCGCGAAGA
CTGCGAGTAGCGGCCCGGTATTTGCGGCCCGTTGCTAAGTCGATGACTCA
CATTCCGTAG back to top
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