EWM30357.1, cds428 (CDS) Nannochloropsis gaditana

Overview
NameEWM30357.1
Unique Namecds428
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:1064541..1064645 +
Alignment locationCM002455.1:1064894..1065643 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30357.1
Productsoluble nsf attachment protein receptor
Orig transcript idgnl|cribi|Naga_100003g54.1874.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:1064541..1064645 +
CM002455.1supercontigCM002455.1:1064894..1065643 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|585113016|gb|EWM30357.1| (soluble nsf attachment protein receptor [Nannochloropsis gaditana])

HSP 1 Score: 582.408 bits (1500), Expect = 0.000e+0
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEVFGSGGGDNTSTLTEQPTSDGLARRLRVAARYLRPVAKSMTHIP 284
            MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEVFGSGGGDNTSTLTEQPTSDGLARRLRVAARYLRPVAKSMTHIP
Sbjct:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEVFGSGGGDNTSTLTEQPTSDGLARRLRVAARYLRPVAKSMTHIP 284          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|635362683|emb|CCI48608.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 145.206 bits (365), Expect = 1.354e-38
Identity = 94/258 (36.43%), Postives = 138/258 (53.49%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLF---KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAV--KKGKVRAPEIHAPPMPTFDEVFGSGGGDNTSTL 253
            M+++ Y+D +L+  L ++ +T+  L     G K   +  ++  LK   E+KKGY   +R + + D R   Y EK +    RI  L  ELKWAK E  +  LF     S  +DG G       N   L ++  +Q KTE SL S   MVEASK+V   T +++  Q++QI +ITD V  MED LTRADKLIR F RR+ATD+ I  F +L+F  +  I+V+ ++  K      P+   PP P  D ++ +      +TL
Sbjct:    1 MSEVTYYDADLTDALEKVNETMSKLAKAPAGVKIELLGIADKKLKEAMELKKGYQLALRQANREDARV--YREKFQEHCNRIEELNGELKWAKAEKERAGLFGDRSSSFKSDGVGM-----GNREMLDKSMDVQKKTEQSLMSTQRMVEASKEVAIATGEQLREQRQQIVQITDEVMRMEDSLTRADKLIRTFARRMATDRVILLFALLSFLGIAAIVVYKSMYPKDKTFAVPDEILPPSP--DTIYNAAISAANNTL 249          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|953501099|emb|CEG37745.1| (Sec20 [Plasmopara halstedii])

HSP 1 Score: 139.043 bits (349), Expect = 3.994e-36
Identity = 89/242 (36.78%), Postives = 126/242 (52.07%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENAT-NDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAV--KKGKVRAPEIHAPPMPT 237
            M +I Y+D +LS  + +L   +G +     G +   +A +E  LK + E+KKG+    +++L+  PR     + EK +    R+  L  E +WAK E  +  LF     A+ +G    N   N   L +   IQ KTE SL S   MVE SK+V A T + +  Q+E I EITD V  +ED L RADKLIR+F RR+ATD+ I  F  L    + GI+ + AV  K      P+   PP PT
Sbjct:    1 MAEISYYDADLSDAITKLNDLMGKVAKAPPGVRPEMLAMAEVKLKEMIELKKGF----QLALRQAPRDQIATFREKFEEHCARVEELSGEFRWAKAEQERNGLFGDRAAANVAGARVTNGMGNKDLLDKTVDIQTKTEQSLMSTAKMVEQSKEVAAATAEALRSQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFTFLVIVGIAGIVGYKAVNPKDTTFYVPDEVTPPDPT 238          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|1214681956|gb|OWZ00474.1| (hypothetical protein PHMEG_00028330 [Phytophthora megakarya])

HSP 1 Score: 137.887 bits (346), Expect = 1.076e-35
Identity = 89/249 (35.74%), Postives = 128/249 (51.41%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLF--------KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPT 237
            M +I Y+D +LS  + +L   +G +     G +   +A +E  LK + E+KKG+    +++L+  PR     + EK +    R+  L +E +WAK E  +  LF         G++GA+G G       N   L +   IQ KTE SL S   MVE SK V A T D +  Q+E I EITD V  +ED L RADKLIR+F RR+ATD+ I  F  L    + GI+ + ++         P+   PP PT
Sbjct:    1 MAEISYYDADLSDAIEKLNDLMGKVAKAPPGVRPEMLAMAEVKLKEMVELKKGF----QLALRQAPRDQVAAFREKFEEHCARVEELSSEFRWAKAEQERNGLFGDRAATNAPGARGANGLG-------NKELLDKTLDIQSKTEQSLMSTAKMVEQSKDVAAATADVLRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFTFLVIVGIAGIVGYKSMHPNDTTFYVPDEVTPPDPT 238          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|698795712|ref|XP_009830885.1| (hypothetical protein H257_07146 [Aphanomyces astaci] >gi|574114461|gb|ETV79949.1| hypothetical protein H257_07146 [Aphanomyces astaci])

HSP 1 Score: 137.502 bits (345), Expect = 1.228e-35
Identity = 89/252 (35.32%), Postives = 134/252 (53.17%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPTFDEVFGSGGGDNT 250
            M +I Y+DG+LS  L +L+Q +  L     G K   +A++E  LK V ++KKG++  +R     +  +  Y EK      R+  L  E+KWAKTE ++  LF  +K             N   L +A+++Q KTE SL++   M+E SK+V   T + +  Q+ Q+  IT+ V  M+DG+ RA+KL+R F RR+ATD+ I FF  L F  +VGIIV+      +     P+   PP P    V  +  G NT
Sbjct:    1 MAEIAYYDGDLSDALTKLDQIMAKLSKAPPGVKSEVLAEAEKKLKEVIDLKKGFSLALRQVTDREDIKT-YREKNDVYAARVEELTREVKWAKTETDRNGLFGDAKAKAAKVPTG----NTDMLNKAQELQGKTEVSLKNTQKMIENSKEVALATGETLREQRNQLNAITEEVMRMDDGVARANKLMRTFTRRMATDRLILFFTFLVFAGIVGIIVYSKANPNQTTFYVPDQVKPPDPG---VIANATGINT 244          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|675169147|ref|XP_008893458.1| (hypothetical protein PPTG_01821 [Phytophthora parasitica INRA-310] >gi|566022016|gb|ETI44927.1| hypothetical protein F443_10372 [Phytophthora parasitica P1569] >gi|567959356|gb|ETK84929.1| hypothetical protein L915_10148 [Phytophthora parasitica] >gi|567988062|gb|ETL38346.1| hypothetical protein L916_10055 [Phytophthora parasitica] >gi|568017300|gb|ETL91477.1| hypothetical protein L917_09984 [Phytophthora parasitica] >gi|568107065|gb|ETN21695.1| hypothetical protein PPTG_01821 [Phytophthora parasitica INRA-310] >gi|570325623|gb|ETO73571.1| hypothetical protein F444_10484 [Phytophthora parasitica P1976] >gi|570949497|gb|ETP14754.1| hypothetical protein F441_10324 [Phytophthora parasitica CJ01A1] >gi|570982869|gb|ETP42824.1| hypothetical protein F442_10290 [Phytophthora parasitica P10297] >gi|970645759|gb|KUF86132.1| uncharacterized protein AM587_10009105 [Phytophthora nicotianae] >gi|970651667|gb|KUF90445.1| uncharacterized protein AM587_10005244 [Phytophthora nicotianae])

HSP 1 Score: 134.806 bits (338), Expect = 1.326e-34
Identity = 87/249 (34.94%), Postives = 128/249 (51.41%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLF--------KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPT 237
            M +I Y+D +LS  + +L + +G +     G +   +A +E  LK + E+KKG+    +++L+  PR     + EK +    R+  L +E +WAK E  +  LF         G++G +G G       N   L +   IQ KTE SL S   MVE SK V A T + +  Q+E I EITD V  +ED L RADKLIR+F RR+ATD+ I  F  L    + GI+ + ++         P+   PP PT
Sbjct:    1 MAEISYYDADLSDAITKLNELMGKVAKAPPGVRPEMLAMAEVKLKEMIELKKGF----QLALRQAPRDQVTAFREKFEEHCARVEELSSEFRWAKAEQERNGLFGDRATTSAAGARGTNGLG-------NKELLDKTLDIQAKTEQSLMSTAKMVEQSKDVAAATAEALRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFAFLVIVGIAGIVGYKSMHPNDTTFYVPDEVTPPDPT 238          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|568047701|gb|ETM44774.1| (hypothetical protein L914_10018 [Phytophthora parasitica])

HSP 1 Score: 134.806 bits (338), Expect = 1.475e-34
Identity = 87/249 (34.94%), Postives = 128/249 (51.41%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLF--------KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPT 237
            M +I Y+D +LS  + +L + +G +     G +   +A +E  LK + E+KKG+    +++L+  PR     + EK +    R+  L +E +WAK E  +  LF         G++G +G G       N   L +   IQ KTE SL S   MVE SK V A T + +  Q+E I EITD V  +ED L RADKLIR+F RR+ATD+ I  F  L    + GI+ + ++         P+   PP PT
Sbjct:    1 MAEISYYDADLSDAITKLNELMGKVAKAPPGVRPEMLAMAEVKLKEMIELKKGF----QLALRQAPRDQVTAFREKFEEHCARVEELSSEFRWAKAEQERNGLFGDRATTSAAGARGTNGLG-------NKELLDKTLDIQAKTEQSLMSTAKMVEQSKDVAAATAEALRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFAFLVIVGIAGIVGYKSMHPNDTTFYVPDEVTPPDPT 238          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|1173942338|gb|OQR91358.1| (hypothetical protein ACHHYP_04769 [Achlya hypogyna])

HSP 1 Score: 133.65 bits (335), Expect = 2.549e-34
Identity = 89/244 (36.48%), Postives = 131/244 (53.69%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHE---YAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPP-MPTF 238
            M +I Y+DG+LS  L  L+  +  L       +   IA+++  LK V ++KKGY     ++L+    R E   Y EK      R+  L  E+KWAK+E  +  LF  +K    +  +     N   L +A++IQ KTE SL++   MVEASK V   T + +  Q+ QI  IT+ V  M+DGL RA+KL+R FGRR+ATD+ I FF  L F  + GII++  +   +     P+   PP + TF
Sbjct:    1 MAEINYYDGDLSEALTVLDGIMARLAKAPAAVRAQVIAEADKKLKEVIDLKKGYT----LALRQVTDREEVKLYREKNDVYAARVEELTREVKWAKSETERNGLFGDAK----ANAMKMPTGNREMLGKAQEIQTKTEISLKNTQKMVEASKDVALATGEVLREQRNQINAITEEVMRMDDGLLRANKLLRTFGRRMATDRIILFFTFLVFAGIAGIIIYSKINPNQTTFFVPDQVKPPDVSTF 236          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|673045169|ref|XP_008876545.1| (hypothetical protein H310_11597 [Aphanomyces invadans] >gi|574467933|gb|ETV94954.1| hypothetical protein H310_11597 [Aphanomyces invadans])

HSP 1 Score: 134.035 bits (336), Expect = 2.936e-34
Identity = 86/243 (35.39%), Postives = 130/243 (53.50%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLF-----KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVK--KGKVRAPEIHAPPMP 236
            M +I Y+DG+LS  L +L Q +  L     G K   + ++E  LK V ++KKG++  +R  + +      Y EK      R+  L  E+KWAK+E ++  LF     K SK   G+  L         L +A+++Q KTE SL++   M+E SK+V   T + +  Q+ Q+  IT+ V  M+DG+ RA+KL+R F RR+ATD+ I FF  L F  +VGIIV+      +     P+   PP P
Sbjct:    1 MAEIAYYDGDLSDALTKLNQIMAKLAKAPPGIKSEVLVEAEKKLKEVIDLKKGFSLALR-QVTDREEIKSYREKNDVYAARVEELTREVKWAKSETDRNGLFGDAKAKASKVPTGNTDL---------LNKAQELQGKTEVSLKNTQKMIENSKEVALATGETLREQRNQLNAITEEVMRMDDGVARANKLMRTFTRRMATDRLILFFTFLVFAGIVGIIVYSKANPDQNTFYVPDQVKPPDP 233          
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|695433777|ref|XP_009531261.1| (hypothetical protein PHYSODRAFT_249448 [Phytophthora sojae] >gi|348674013|gb|EGZ13832.1| hypothetical protein PHYSODRAFT_249448 [Phytophthora sojae])

HSP 1 Score: 134.035 bits (336), Expect = 3.008e-34
Identity = 87/248 (35.08%), Postives = 128/248 (51.61%), Query Frame = 0
Query:    1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLF-------KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPT 237
            M +I Y+D +LS  + +L + +G +     G +   +A +E  LK + E+KKG+    +++L+  PR     + EK +    R+  L +E +WAK E  +  LF         ++G +G G       N   L +   IQ KTE SL S   MVE SK+V A T + +  Q+E I EITD V  +ED L RADKLIR+F RR+ATD+ I  F  L    + GI+ + +V         P+   PP PT
Sbjct:    1 MAEISYYDADLSDAIMKLNELMGKVAKAPPGVRPEILAMAEVKLKEMMELKKGF----QLALRQAPRDQVAAFREKFEEHCARVEELSSEFRWAKAEQERNGLFGDRAAANAAARGTNGLG-------NKELLDKTMDIQSKTEQSLMSTAKMVEQSKEVAAATAEVLRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFTFLVIVGIAGIVGYKSVHPDDTTFYVPDEVTPPDPT 237          
The following BLAST results are available for this feature:
BLAST of EWM30357.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113016|gb|EWM30357.1|0.000e+0100.00soluble nsf attachment protein receptor [Nannochlo... [more]
gi|635362683|emb|CCI48608.1|1.354e-3836.43unnamed protein product [Albugo candida][more]
gi|953501099|emb|CEG37745.1|3.994e-3636.78Sec20 [Plasmopara halstedii][more]
gi|1214681956|gb|OWZ00474.1|1.076e-3535.74hypothetical protein PHMEG_00028330 [Phytophthora ... [more]
gi|698795712|ref|XP_009830885.1|1.228e-3535.32hypothetical protein H257_07146 [Aphanomyces astac... [more]
gi|675169147|ref|XP_008893458.1|1.326e-3434.94hypothetical protein PPTG_01821 [Phytophthora para... [more]
gi|568047701|gb|ETM44774.1|1.475e-3434.94hypothetical protein L914_10018 [Phytophthora para... [more]
gi|1173942338|gb|OQR91358.1|2.549e-3436.48hypothetical protein ACHHYP_04769 [Achlya hypogyna... [more]
gi|673045169|ref|XP_008876545.1|2.936e-3435.39hypothetical protein H310_11597 [Aphanomyces invad... [more]
gi|695433777|ref|XP_009531261.1|3.008e-3435.08hypothetical protein PHYSODRAFT_249448 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna428rna428Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications