EWM30357.1, cds428 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|585113016|gb|EWM30357.1| (soluble nsf attachment protein receptor [Nannochloropsis gaditana]) HSP 1 Score: 582.408 bits (1500), Expect = 0.000e+0 Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEVFGSGGGDNTSTLTEQPTSDGLARRLRVAARYLRPVAKSMTHIP 284
MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEVFGSGGGDNTSTLTEQPTSDGLARRLRVAARYLRPVAKSMTHIP
Sbjct: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVRAPEIHAPPMPTFDEVFGSGGGDNTSTLTEQPTSDGLARRLRVAARYLRPVAKSMTHIP 284
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|635362683|emb|CCI48608.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 145.206 bits (365), Expect = 1.354e-38 Identity = 94/258 (36.43%), Postives = 138/258 (53.49%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLF---KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAV--KKGKVRAPEIHAPPMPTFDEVFGSGGGDNTSTL 253
M+++ Y+D +L+ L ++ +T+ L G K + ++ LK E+KKGY +R + + D R Y EK + RI L ELKWAK E + LF S +DG G N L ++ +Q KTE SL S MVEASK+V T +++ Q++QI +ITD V MED LTRADKLIR F RR+ATD+ I F +L+F + I+V+ ++ K P+ PP P D ++ + +TL
Sbjct: 1 MSEVTYYDADLTDALEKVNETMSKLAKAPAGVKIELLGIADKKLKEAMELKKGYQLALRQANREDARV--YREKFQEHCNRIEELNGELKWAKAEKERAGLFGDRSSSFKSDGVGM-----GNREMLDKSMDVQKKTEQSLMSTQRMVEASKEVAIATGEQLREQRQQIVQITDEVMRMEDSLTRADKLIRTFARRMATDRVILLFALLSFLGIAAIVVYKSMYPKDKTFAVPDEILPPSP--DTIYNAAISAANNTL 249
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|953501099|emb|CEG37745.1| (Sec20 [Plasmopara halstedii]) HSP 1 Score: 139.043 bits (349), Expect = 3.994e-36 Identity = 89/242 (36.78%), Postives = 126/242 (52.07%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENAT-NDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAV--KKGKVRAPEIHAPPMPT 237
M +I Y+D +LS + +L +G + G + +A +E LK + E+KKG+ +++L+ PR + EK + R+ L E +WAK E + LF A+ +G N N L + IQ KTE SL S MVE SK+V A T + + Q+E I EITD V +ED L RADKLIR+F RR+ATD+ I F L + GI+ + AV K P+ PP PT
Sbjct: 1 MAEISYYDADLSDAITKLNDLMGKVAKAPPGVRPEMLAMAEVKLKEMIELKKGF----QLALRQAPRDQIATFREKFEEHCARVEELSGEFRWAKAEQERNGLFGDRAAANVAGARVTNGMGNKDLLDKTVDIQTKTEQSLMSTAKMVEQSKEVAAATAEALRSQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFTFLVIVGIAGIVGYKAVNPKDTTFYVPDEVTPPDPT 238
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|1214681956|gb|OWZ00474.1| (hypothetical protein PHMEG_00028330 [Phytophthora megakarya]) HSP 1 Score: 137.887 bits (346), Expect = 1.076e-35 Identity = 89/249 (35.74%), Postives = 128/249 (51.41%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLF--------KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPT 237
M +I Y+D +LS + +L +G + G + +A +E LK + E+KKG+ +++L+ PR + EK + R+ L +E +WAK E + LF G++GA+G G N L + IQ KTE SL S MVE SK V A T D + Q+E I EITD V +ED L RADKLIR+F RR+ATD+ I F L + GI+ + ++ P+ PP PT
Sbjct: 1 MAEISYYDADLSDAIEKLNDLMGKVAKAPPGVRPEMLAMAEVKLKEMVELKKGF----QLALRQAPRDQVAAFREKFEEHCARVEELSSEFRWAKAEQERNGLFGDRAATNAPGARGANGLG-------NKELLDKTLDIQSKTEQSLMSTAKMVEQSKDVAAATADVLRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFTFLVIVGIAGIVGYKSMHPNDTTFYVPDEVTPPDPT 238
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|698795712|ref|XP_009830885.1| (hypothetical protein H257_07146 [Aphanomyces astaci] >gi|574114461|gb|ETV79949.1| hypothetical protein H257_07146 [Aphanomyces astaci]) HSP 1 Score: 137.502 bits (345), Expect = 1.228e-35 Identity = 89/252 (35.32%), Postives = 134/252 (53.17%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPTFDEVFGSGGGDNT 250
M +I Y+DG+LS L +L+Q + L G K +A++E LK V ++KKG++ +R + + Y EK R+ L E+KWAKTE ++ LF +K N L +A+++Q KTE SL++ M+E SK+V T + + Q+ Q+ IT+ V M+DG+ RA+KL+R F RR+ATD+ I FF L F +VGIIV+ + P+ PP P V + G NT
Sbjct: 1 MAEIAYYDGDLSDALTKLDQIMAKLSKAPPGVKSEVLAEAEKKLKEVIDLKKGFSLALRQVTDREDIKT-YREKNDVYAARVEELTREVKWAKTETDRNGLFGDAKAKAAKVPTG----NTDMLNKAQELQGKTEVSLKNTQKMIENSKEVALATGETLREQRNQLNAITEEVMRMDDGVARANKLMRTFTRRMATDRLILFFTFLVFAGIVGIIVYSKANPNQTTFYVPDQVKPPDPG---VIANATGINT 244
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|675169147|ref|XP_008893458.1| (hypothetical protein PPTG_01821 [Phytophthora parasitica INRA-310] >gi|566022016|gb|ETI44927.1| hypothetical protein F443_10372 [Phytophthora parasitica P1569] >gi|567959356|gb|ETK84929.1| hypothetical protein L915_10148 [Phytophthora parasitica] >gi|567988062|gb|ETL38346.1| hypothetical protein L916_10055 [Phytophthora parasitica] >gi|568017300|gb|ETL91477.1| hypothetical protein L917_09984 [Phytophthora parasitica] >gi|568107065|gb|ETN21695.1| hypothetical protein PPTG_01821 [Phytophthora parasitica INRA-310] >gi|570325623|gb|ETO73571.1| hypothetical protein F444_10484 [Phytophthora parasitica P1976] >gi|570949497|gb|ETP14754.1| hypothetical protein F441_10324 [Phytophthora parasitica CJ01A1] >gi|570982869|gb|ETP42824.1| hypothetical protein F442_10290 [Phytophthora parasitica P10297] >gi|970645759|gb|KUF86132.1| uncharacterized protein AM587_10009105 [Phytophthora nicotianae] >gi|970651667|gb|KUF90445.1| uncharacterized protein AM587_10005244 [Phytophthora nicotianae]) HSP 1 Score: 134.806 bits (338), Expect = 1.326e-34 Identity = 87/249 (34.94%), Postives = 128/249 (51.41%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLF--------KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPT 237
M +I Y+D +LS + +L + +G + G + +A +E LK + E+KKG+ +++L+ PR + EK + R+ L +E +WAK E + LF G++G +G G N L + IQ KTE SL S MVE SK V A T + + Q+E I EITD V +ED L RADKLIR+F RR+ATD+ I F L + GI+ + ++ P+ PP PT
Sbjct: 1 MAEISYYDADLSDAITKLNELMGKVAKAPPGVRPEMLAMAEVKLKEMIELKKGF----QLALRQAPRDQVTAFREKFEEHCARVEELSSEFRWAKAEQERNGLFGDRATTSAAGARGTNGLG-------NKELLDKTLDIQAKTEQSLMSTAKMVEQSKDVAAATAEALRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFAFLVIVGIAGIVGYKSMHPNDTTFYVPDEVTPPDPT 238
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|568047701|gb|ETM44774.1| (hypothetical protein L914_10018 [Phytophthora parasitica]) HSP 1 Score: 134.806 bits (338), Expect = 1.475e-34 Identity = 87/249 (34.94%), Postives = 128/249 (51.41%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLF--------KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPT 237
M +I Y+D +LS + +L + +G + G + +A +E LK + E+KKG+ +++L+ PR + EK + R+ L +E +WAK E + LF G++G +G G N L + IQ KTE SL S MVE SK V A T + + Q+E I EITD V +ED L RADKLIR+F RR+ATD+ I F L + GI+ + ++ P+ PP PT
Sbjct: 1 MAEISYYDADLSDAITKLNELMGKVAKAPPGVRPEMLAMAEVKLKEMIELKKGF----QLALRQAPRDQVTAFREKFEEHCARVEELSSEFRWAKAEQERNGLFGDRATTSAAGARGTNGLG-------NKELLDKTLDIQAKTEQSLMSTAKMVEQSKDVAAATAEALRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFAFLVIVGIAGIVGYKSMHPNDTTFYVPDEVTPPDPT 238
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|1173942338|gb|OQR91358.1| (hypothetical protein ACHHYP_04769 [Achlya hypogyna]) HSP 1 Score: 133.65 bits (335), Expect = 2.549e-34 Identity = 89/244 (36.48%), Postives = 131/244 (53.69%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHE---YAEKLKAVDERIAALETELKWAKTEANKKSLFKGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPP-MPTF 238
M +I Y+DG+LS L L+ + L + IA+++ LK V ++KKGY ++L+ R E Y EK R+ L E+KWAK+E + LF +K + + N L +A++IQ KTE SL++ MVEASK V T + + Q+ QI IT+ V M+DGL RA+KL+R FGRR+ATD+ I FF L F + GII++ + + P+ PP + TF
Sbjct: 1 MAEINYYDGDLSEALTVLDGIMARLAKAPAAVRAQVIAEADKKLKEVIDLKKGYT----LALRQVTDREEVKLYREKNDVYAARVEELTREVKWAKSETERNGLFGDAK----ANAMKMPTGNREMLGKAQEIQTKTEISLKNTQKMVEASKDVALATGEVLREQRNQINAITEEVMRMDDGLLRANKLLRTFGRRMATDRIILFFTFLVFAGIAGIIIYSKINPNQTTFFVPDQVKPPDVSTF 236
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|673045169|ref|XP_008876545.1| (hypothetical protein H310_11597 [Aphanomyces invadans] >gi|574467933|gb|ETV94954.1| hypothetical protein H310_11597 [Aphanomyces invadans]) HSP 1 Score: 134.035 bits (336), Expect = 2.936e-34 Identity = 86/243 (35.39%), Postives = 130/243 (53.50%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRHEYAEKLKAVDERIAALETELKWAKTEANKKSLF-----KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVK--KGKVRAPEIHAPPMP 236
M +I Y+DG+LS L +L Q + L G K + ++E LK V ++KKG++ +R + + Y EK R+ L E+KWAK+E ++ LF K SK G+ L L +A+++Q KTE SL++ M+E SK+V T + + Q+ Q+ IT+ V M+DG+ RA+KL+R F RR+ATD+ I FF L F +VGIIV+ + P+ PP P
Sbjct: 1 MAEIAYYDGDLSDALTKLNQIMAKLAKAPPGIKSEVLVEAEKKLKEVIDLKKGFSLALR-QVTDREEIKSYREKNDVYAARVEELTREVKWAKSETDRNGLFGDAKAKASKVPTGNTDL---------LNKAQELQGKTEVSLKNTQKMIENSKEVALATGETLREQRNQLNAITEEVMRMDDGVARANKLMRTFTRRMATDRLILFFTFLVFAGIVGIIVYSKANPDQNTFYVPDQVKPPDP 233
BLAST of EWM30357.1 vs. NCBI_GenBank
Match: gi|695433777|ref|XP_009531261.1| (hypothetical protein PHYSODRAFT_249448 [Phytophthora sojae] >gi|348674013|gb|EGZ13832.1| hypothetical protein PHYSODRAFT_249448 [Phytophthora sojae]) HSP 1 Score: 134.035 bits (336), Expect = 3.008e-34 Identity = 87/248 (35.08%), Postives = 128/248 (51.61%), Query Frame = 0
Query: 1 MTDIEYWDGELSSKLAELEQTIGNLKSMRGGDKEAGIAKSEATLKRVREVKKGYNYEMRMSLKNDPRRH--EYAEKLKAVDERIAALETELKWAKTEANKKSLF-------KGSKGADGSGTLNENATNDTYLTEAKKIQDKTEASLQSALGMVEASKQVGANTVDEVNRQKEQIAEITDTVEAMEDGLTRADKLIRAFGRRIATDKFIQFFFVLNFGLLVGIIVWYAVKKGKVR--APEIHAPPMPT 237
M +I Y+D +LS + +L + +G + G + +A +E LK + E+KKG+ +++L+ PR + EK + R+ L +E +WAK E + LF ++G +G G N L + IQ KTE SL S MVE SK+V A T + + Q+E I EITD V +ED L RADKLIR+F RR+ATD+ I F L + GI+ + +V P+ PP PT
Sbjct: 1 MAEISYYDADLSDAIMKLNELMGKVAKAPPGVRPEILAMAEVKLKEMMELKKGF----QLALRQAPRDQVAAFREKFEEHCARVEELSSEFRWAKAEQERNGLFGDRAAANAAARGTNGLG-------NKELLDKTMDIQSKTEQSLMSTAKMVEQSKEVAAATAEVLRGQREHIVEITDAVMGIEDSLQRADKLIRSFARRMATDRVILLFTFLVIVGIAGIVGYKSVHPDDTTFYVPDEVTPPDPT 237 The following BLAST results are available for this feature:
BLAST of EWM30357.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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