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Properties
| Property Name | Value |
|---|
| Product | exosome complex component rrp46 |
| Orig transcript id | gnl|cribi|Naga_100854g1.7438.mrna |
| Orig protein id | gnl|cribi|Naga_100854g1.7438 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:133175..135508 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4268 ID=rna4268|Name=rna4268|organism=Nannochloropsis gaditana|type=mRNA|length=440bp
AGGGGAGGGACATGAAGAAGATATTTCGAGAGAGACAGGGGCTTGAACTC
ACCTTAATTAGGGGCTTGAACTCACCTTAACTTGGGATTGGAAACAGGCG
CCCGTTCATCGTGGCCTCCGACTGCTTCTCATTGACTCACTTCGCGCACT
TTTGGCCCCTGTGCTCGGACAGACCATGCCCAACGGACACTATCTCTTAG
GAGCAGTGGGAAAAACACTCAACTACCTTGCCTTACGCTATGGTCTGGCC
GTCGTCGTCACCAATGGGGTAGTACTGGATCGATCCTCTACCCCCTCCAT
CCCTTCCTCCTCCGCCTCCTCCGCCCCCAGCCCCTCCCTCTGGGGCTGTA
GACCTGCCTTGGGGGTCTATTGGTCCATCTATCCCTCCCTACGGCTCATG
TTGCGCCTACATGGGGGGGGAGGCGGGAGGGAGGGAGGGA back to topprotein sequence of rna4268 >rna4268-protein ID=rna4268-protein|Name=rna4268|organism=Nannochloropsis gaditana|type=polypeptide|length=270bp
MSMEVESPPITPLPPSSLSLSLPPRPDRRLANQLRPPMCELGPLNRADGS
ARFAQGQTSVLAAVYGPAAPRFSRKERVEGAAVEVTVHPHYGLATSSEKE
KEGAVKALLEAAICLERFPRTVIHVICQVCEDNGGLMACLMNAASLAVIN
AGIDMKYVPLTVSMALISPPSATMKALPSLPSSSSTTAPTSSSTYLLLDP
INEEERQSIATITIGISSVDQNVLSCQSMGIMMPSQLFEAIDVAKGAAKA
LMAFLRMTIEEHSRHISKEK back to topmRNA from alignment at CM002463.1:133175..135508+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4268 ID=rna4268|Name=rna4268|organism=Nannochloropsis gaditana|type=mRNA|length=2334bp|location=Sequence derived from alignment at CM002463.1:133175..135508+ (Nannochloropsis gaditana)
CATGCCATTTTTATTGGTCCAAGACGCATACAGACGCCACAAACCCTGTG
CACCAGAGCACTGCAGGGGAGCAGGCGAAGTCAAGTGGTGCTCGCCCACT
ACGATCGAATGATTTCCTCTTTGACAAAAATAAAGCAAGTCCTTGTCTCA
AGGACACAAGAAGAATTTAACCCAAACAACCATGAGTTGCCGTTGTACAT
TGCCACTGTCACGGAGGACGAAAAAGGACAAAGGAAGAGTGCTCTGACCG
TACTGTCTAAgtcacccttcccttccccttcacctTTACAGCTATGAGTA
TGGAAGTGGAGTCACCACCGATTACCccgcttccaccctcctccctgtcc
ctgtctTTGCCTCCACGGCCTGACCGACGCTTGGCCAATCAACTTCGCCC
TCCTATGTGTGAATTAGGTCCTCTAAACCGAGCAGACGGTTCTGCCCGCT
TTGCCCAGGGACAAACGAGTGTCTTGGCTGCCGTTTATGGACCGGCGGCA
CCACGATTTTCTCGAAAAGAACGTGTGGAAGGAGCTGCCGTGGAGGTGAC
CGTCCACCCACACTATGGTTTAGCTACATCGagtgaaaaggagaaggagg
gggctgtgAAAGCCCTCTTGGAGGCGGCGATTTGCCTCGAACGCTTTCCC
CGGACGGTTATCCACGTTATTTGCCAAGTGTGCGAGGACAACGGGGGCCT
CATGGCGTGCCTGATGAATGCAGCGAGCCTCGCCGTCATTAACGCCGGCA
TCGACATGAAATACGTGCCATTGACCGTCTCCATGGCCCTgatctccccg
ccctccgccacgaTGAAAGcacttccctctctgccttcctcctcctctac
aaCGGCCCctaccagcagcagcacatATCTATTGCTCGATCCCATTAACG
AGGAAGAGCGCCAAAGCATAGCTACCATTACAATAGGCATAAGTAGTGTA
GATCAAAACGTGTTGTCCTGTCAAAGCATGGGCATAATGATGCCTTCCCA
GCTCTTTGAGGCAATTGATGTGGCTAAAGGAGCAGCAAAGGCTCTTATGG
CATTTTTACGAATGACCATTGAGGAGCACAGTCGGCACATTTCCAAAGAA
AAATAGTTTGCAGGCATGACGCAGGTATGTCTCGTACTACATTtacaagg
aggggacaaTGAGTCACCTACTTTTGCTGTGCTTTTAGTCAccccacatc
cgggtcgccttgTGTTGACATCCTCCGTCTTGAACGTTTGACCAGCCGAA
ATTGCCATCTTATTGAATGCATTTACATCATGTCTTGCCTCCCAGTCGAA
GTTTGTTTTACATTGTATTTTGCTTGATACTAGCATTTCTCACTGTCGCA
CTGTTCTTGTATCTTTAAGGCGCATGAAGGCGTGAAGCCTTTCCCGCGCA
CGCCATCTTGACGCGATTTTGAGCGACGGCTGTATTCGTTTGAAATTTAT
GGatggccaccaccatggCCGATGATGGCACTGATTTGTGATTCTCTCTC
CTCTACGCTACAGGTGCAATCCCATGTTGTAATACTGACATCGTGACTGc
attcagcagcagcagcactgcCACAAATGCGACGCTGCGCATCAAGACCA
AGGCGGGAACGGAGGAAACGGTGGAGATGCCCATGCCGCCGACGCATATT
TGTCAATACGTGCCTGCCCCCGGCGAGGCAGTAGGATACAAAATCACTGT
TCGTGTTGATGTGTTCGAGACGCGCGCAGACATGTGGCTCCGTAACGGTG
AGAGGagagtggaagggagggagcgatggcgTAATTTGAAAAGTATCGGG
GAGGGTCCCCGCCAGCCCACCGGCTTCGTGTTCAAAAATGACTCACACTT
GTTATATCGTACCATGCAGTCATAGACAGGAGCGAGTGGGCGGAGCCTGT
TGATCCCTCCCAGCGGGACCGGGCCCTTATccggcgggcggcagaggTAG
TCCAGGCGCTGGGCGTCGGGGTGTACCTCACCGTCGTAGAGAAGAACAAA
ATTGCAACGCTTCTTTACATCGTGCAATACCTGCATCCACTGGTACGTGA
GACAGAACCGATATTGCATGCGTGttctcccctttgccccttcGCTACCT
GACGATTCGACCCTTTCTTCCTAACTTCCCTTCATCAGGTGCCCGAGACA
GCCCCCTTCAAGGAAAATTTCCATCTACAGGAAGCGCTATGGAGGGTGGT
AGAGGCGCCGTGGGTGTCGCCCCTCGAAGCCAAGAATCCCAACCAGgtca
cgcccttcccccgcgaTGGGAGGCGCCTGTACCTCGTAAAGAGAGGGGAC
CTCGGCGACAGGCGCAACGCCTTACTTTAAACCA back to topCoding sequence (CDS) from alignment at CM002463.1:133175..135508+ >rna4268 ID=rna4268|Name=rna4268|organism=Nannochloropsis gaditana|type=CDS|length=813bp|location=Sequence derived from alignment at CM002463.1:133175..135508+ (Nannochloropsis gaditana)
ATGAGTATGGAAGTGGAGTCACCACCGATTACCccgcttccaccctcctc
cctgtccctgtctTTGCCTCCACGGCCTGACCGACGCTTGGCCAATCAAC
TTCGCCCTCCTATGTGTGAATTAGGTCCTCTAAACCGAGCAGACGGTTCT
GCCCGCTTTGCCCAGGGACAAACGAGTGTCTTGGCTGCCGTTTATGGACC
GGCGGCACCACGATTTTCTCGAAAAGAACGTGTGGAAGGAGCTGCCGTGG
AGGTGACCGTCCACCCACACTATGGTTTAGCTACATCGagtgaaaaggag
aaggagggggctgtgAAAGCCCTCTTGGAGGCGGCGATTTGCCTCGAACG
CTTTCCCCGGACGGTTATCCACGTTATTTGCCAAGTGTGCGAGGACAACG
GGGGCCTCATGGCGTGCCTGATGAATGCAGCGAGCCTCGCCGTCATTAAC
GCCGGCATCGACATGAAATACGTGCCATTGACCGTCTCCATGGCCCTgat
ctccccgccctccgccacgaTGAAAGcacttccctctctgccttcctcct
cctctacaaCGGCCCctaccagcagcagcacatATCTATTGCTCGATCCC
ATTAACGAGGAAGAGCGCCAAAGCATAGCTACCATTACAATAGGCATAAG
TAGTGTAGATCAAAACGTGTTGTCCTGTCAAAGCATGGGCATAATGATGC
CTTCCCAGCTCTTTGAGGCAATTGATGTGGCTAAAGGAGCAGCAAAGGCT
CTTATGGCATTTTTACGAATGACCATTGAGGAGCACAGTCGGCACATTTC
CAAAGAAAAATAG back to top
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