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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100668g2.3087.mrna |
| Orig protein id | gnl|cribi|Naga_100668g2.3087 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:111461..112240 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4260 ID=rna4260|Name=rna4260|organism=Nannochloropsis gaditana|type=mRNA|length=423bp
ATGGACCCGTACGCAGCGGGAATGCAAGGTGGTGGCTATTACATGCCGCA
AGAAGACACAAGCCCTTTAGCTCTGGAAGAGAAGGACGGCTTGCGCATGT
CCTGGGGCGTCTGGCCATCCTCTCGGATTGAGGTGACTCGCATTGTGGTA
CCCGTGGCAGGACTATACACACCATTACGACGCATCGAGACAATGCCTGC
GCCCTTGGAATACGATCCGATCCGTTGCAATGGCTGCGGCGGTGTGCTTA
ACCCTTATTGCTCTGTCGATTTCAGAAGCAAGGTCTGGACGTGCCCATTC
TGCATGAACCGGAATCACTTTCCCCCCCACTATGCCGAGAACATTTCCGA
GCAAAATCTGCCGGTGGAGCTTTTCCAGCAGTACACCACGGTGGAGTATG
AACTCCAGAGGAATGGAGGATAA back to topprotein sequence of rna4260 >rna4260-protein ID=rna4260-protein|Name=rna4260|organism=Nannochloropsis gaditana|type=polypeptide|length=182bp
MELQLVSLIIHKEQKTSYQSFPSLKSPDATNRVPSLIEEMKSSFRHSPRH
HTESAQLSRLPHEYTVCEATFIVAAIQTHLSLLKDSVVDSYGLFLVVVCE
FVASRIIKTVRNLNDKLEDLFFGLTKECQGIDLTTRKVSDVSALASKAHT
TSTYPLSSVDSLLEVKQICKIAFSFQHATVGL back to topmRNA from alignment at CM002463.1:111461..112240- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4260 ID=rna4260|Name=rna4260|organism=Nannochloropsis gaditana|type=mRNA|length=780bp|location=Sequence derived from alignment at CM002463.1:111461..112240- (Nannochloropsis gaditana)
ATGGAACTTCAATTAGTCAGTTGTTAAATCTCCTTCAACAGCTTTCAATC
GACGTTTCAGGCTAAGGTCACATCCAGTAATCATTCATAAGGAGCAGAAA
ACGTCATATCAATCATTTCCGTCCCTCAAAAGCCCCGATGCAACCAACCG
CGTGCCTTCGCTTATAGAAGAAATGAAATCGTCTTTGTTATCAGATTCCC
TCTTAACTATTAAGCGGCTTTAATGCAAAGTAGGCATTCCCCTAGACACC
ATACAGAGAGTGCTCAATTGTCGCGCCTTCCAGTATAACCAAGAGTATTT
AATTGGATCGACAGTGGGAGGTTAAAGCGGACAGCCGAAATCCAAATAGC
ATGAATACACTGTTTGCGAAGCAACATTTATTGTTGCTGCGATTCAAACT
CATTTGTCGCTGCTGAAAGATTCAGTGGTGGACTCCTACGGTCTTTTTTT
GGTCGTCGTGTGCGAGTTTGTGTAGTTTCAACACAAAATGACATCAGGAC
GAAGAACGAAATGTCCTGATATCTCCCAGACAAAAGGGCTTCCAGAATCA
TCAAAACGGTGCGAAATTTAAATGATAAGCTAGAGGACTTATTCTTTGGC
CTTACAAAGGAATGTCAAGGGATTGATTTAACGACAAGGAAAGTCTCGGA
CGTGAGCGCGCTCGCAAGTAAAGCTCACACCACGAGCACCTATCCATTGA
GCAGCGTGGATTCGCTTTTAGAGGTAAAGCAAATCTGTAAAATCGCTTTT
AGTTTTCAGCACGCTACTGTCGGACTTTGA back to topCoding sequence (CDS) from alignment at CM002463.1:111461..112240- >rna4260 ID=rna4260|Name=rna4260|organism=Nannochloropsis gaditana|type=CDS|length=2745bp|location=Sequence derived from alignment at CM002463.1:111461..112240- (Nannochloropsis gaditana)
GGCTTCCAGAATCATCAAAACGGTGCGAAATTTAAATGATAAGCTAGAGG
ACTTATTCTTTGGCCTTACAAAGGAATGTCAAGGGATTGATTTAACGACA
AGGAAAGTCTCGGACGTGAGCGCGCTCGCAAGTAAAGCTCACACCACGAG
CACCTATCCATTGAGCAGCGTGGATTCGCTTTTAGAGGTAAAGCAAATCT
GTAAAATCGCTTTTAGTTTTCAGCACGCTACTGTCGGACTTTGACATGAA
TACACTGTTTGCGAAGCAACATTTATTGTTGCTGCGATTCAAACTCATTT
GTCGCTGCTGAAAGATTCAGTGGTGGACTCCTACGGTCTTTTTTTGGTCG
TCGTGTGCGAGTTTGTTAGGCATTCCCCTAGACACCATACAGAGAGTGCT
CAATTGTCGCGCCTTCCATAATCATTCATAAGGAGCAGAAAACGTCATAT
CAATCATTTCCGTCCCTCAAAAGCCCCGATGCAACCAACCGCGTGCCTTC
GCTTATAGAAGAAATGAAATCGTCTTTATGGAACTTCAATTAGTCAGTTG
GCTTCCAGAATCATCAAAACGGTGCGAAATTTAAATGATAAGCTAGAGGA
CTTATTCTTTGGCCTTACAAAGGAATGTCAAGGGATTGATTTAACGACAA
GGAAAGTCTCGGACGTGAGCGCGCTCGCAAGTAAAGCTCACACCACGAGC
ACCTATCCATTGAGCAGCGTGGATTCGCTTTTAGAGGTAAAGCAAATCTG
TAAAATCGCTTTTAGTTTTCAGCACGCTACTGTCGGACTTTGACATGAAT
ACACTGTTTGCGAAGCAACATTTATTGTTGCTGCGATTCAAACTCATTTG
TCGCTGCTGAAAGATTCAGTGGTGGACTCCTACGGTCTTTTTTTGGTCGT
CGTGTGCGAGTTTGTTAGGCATTCCCCTAGACACCATACAGAGAGTGCTC
AATTGTCGCGCCTTCCATAATCATTCATAAGGAGCAGAAAACGTCATATC
AATCATTTCCGTCCCTCAAAAGCCCCGATGCAACCAACCGCGTGCCTTCG
CTTATAGAAGAAATGAAATCGTCTTTATGGAACTTCAATTAGTCAGTTGG
CTTCCAGAATCATCAAAACGGTGCGAAATTTAAATGATAAGCTAGAGGAC
TTATTCTTTGGCCTTACAAAGGAATGTCAAGGGATTGATTTAACGACAAG
GAAAGTCTCGGACGTGAGCGCGCTCGCAAGTAAAGCTCACACCACGAGCA
CCTATCCATTGAGCAGCGTGGATTCGCTTTTAGAGGTAAAGCAAATCTGT
AAAATCGCTTTTAGTTTTCAGCACGCTACTGTCGGACTTTGACATGAATA
CACTGTTTGCGAAGCAACATTTATTGTTGCTGCGATTCAAACTCATTTGT
CGCTGCTGAAAGATTCAGTGGTGGACTCCTACGGTCTTTTTTTGGTCGTC
GTGTGCGAGTTTGTTAGGCATTCCCCTAGACACCATACAGAGAGTGCTCA
ATTGTCGCGCCTTCCATAATCATTCATAAGGAGCAGAAAACGTCATATCA
ATCATTTCCGTCCCTCAAAAGCCCCGATGCAACCAACCGCGTGCCTTCGC
TTATAGAAGAAATGAAATCGTCTTTATGGAACTTCAATTAGTCAGTTGGC
TTCCAGAATCATCAAAACGGTGCGAAATTTAAATGATAAGCTAGAGGACT
TATTCTTTGGCCTTACAAAGGAATGTCAAGGGATTGATTTAACGACAAGG
AAAGTCTCGGACGTGAGCGCGCTCGCAAGTAAAGCTCACACCACGAGCAC
CTATCCATTGAGCAGCGTGGATTCGCTTTTAGAGGTAAAGCAAATCTGTA
AAATCGCTTTTAGTTTTCAGCACGCTACTGTCGGACTTTGACATGAATAC
ACTGTTTGCGAAGCAACATTTATTGTTGCTGCGATTCAAACTCATTTGTC
GCTGCTGAAAGATTCAGTGGTGGACTCCTACGGTCTTTTTTTGGTCGTCG
TGTGCGAGTTTGTTAGGCATTCCCCTAGACACCATACAGAGAGTGCTCAA
TTGTCGCGCCTTCCATAATCATTCATAAGGAGCAGAAAACGTCATATCAA
TCATTTCCGTCCCTCAAAAGCCCCGATGCAACCAACCGCGTGCCTTCGCT
TATAGAAGAAATGAAATCGTCTTTATGGAACTTCAATTAGTCAGTTGGCT
TCCAGAATCATCAAAACGGTGCGAAATTTAAATGATAAGCTAGAGGACTT
ATTCTTTGGCCTTACAAAGGAATGTCAAGGGATTGATTTAACGACAAGGA
AAGTCTCGGACGTGAGCGCGCTCGCAAGTAAAGCTCACACCACGAGCACC
TATCCATTGAGCAGCGTGGATTCGCTTTTAGAGGTAAAGCAAATCTGTAA
AATCGCTTTTAGTTTTCAGCACGCTACTGTCGGACTTTGACATGAATACA
CTGTTTGCGAAGCAACATTTATTGTTGCTGCGATTCAAACTCATTTGTCG
CTGCTGAAAGATTCAGTGGTGGACTCCTACGGTCTTTTTTTGGTCGTCGT
GTGCGAGTTTGTTAGGCATTCCCCTAGACACCATACAGAGAGTGCTCAAT
TGTCGCGCCTTCCATAATCATTCATAAGGAGCAGAAAACGTCATATCAAT
CATTTCCGTCCCTCAAAAGCCCCGATGCAACCAACCGCGTGCCTTCGCTT
ATAGAAGAAATGAAATCGTCTTTATGGAACTTCAATTAGTCAGTT back to top
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