EWM26424.1, cds4250 (CDS) Nannochloropsis gaditana

Overview
NameEWM26424.1
Unique Namecds4250
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:112219..112240 -
Alignment locationCM002463.1:112055..112163 -
Alignment locationCM002463.1:111959..112010 -
Alignment locationCM002463.1:111770..111891 -
Alignment locationCM002463.1:111461..111704 -

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Properties
Property NameValue
Protein idEWM26424.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100668g2.3087.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:112219..112240 -
CM002463.1supercontigCM002463.1:112055..112163 -
CM002463.1supercontigCM002463.1:111959..112010 -
CM002463.1supercontigCM002463.1:111770..111891 -
CM002463.1supercontigCM002463.1:111461..111704 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26424.1 vs. NCBI_GenBank
Match: gi|585108462|gb|EWM26424.1| (hypothetical protein Naga_100668g2 [Nannochloropsis gaditana])

HSP 1 Score: 370.548 bits (950), Expect = 7.714e-130
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0 
Query:    1 MELQLVSLIIHKEQKTSYQSFPSLKSPDATNRVPSLIEEMKSSFRHSPRHHTESAQLSRLPHEYTVCEATFIVAAIQTHLSLLKDSVVDSYGLFLVVVCEFVASRIIKTVRNLNDKLEDLFFGLTKECQGIDLTTRKVSDVSALASKAHTTSTYPLSSVDSLLEVKQICKIAFSFQHATVGL 182
            MELQLVSLIIHKEQKTSYQSFPSLKSPDATNRVPSLIEEMKSSFRHSPRHHTESAQLSRLPHEYTVCEATFIVAAIQTHLSLLKDSVVDSYGLFLVVVCEFVASRIIKTVRNLNDKLEDLFFGLTKECQGIDLTTRKVSDVSALASKAHTTSTYPLSSVDSLLEVKQICKIAFSFQHATVGL
Sbjct:    1 MELQLVSLIIHKEQKTSYQSFPSLKSPDATNRVPSLIEEMKSSFRHSPRHHTESAQLSRLPHEYTVCEATFIVAAIQTHLSLLKDSVVDSYGLFLVVVCEFVASRIIKTVRNLNDKLEDLFFGLTKECQGIDLTTRKVSDVSALASKAHTTSTYPLSSVDSLLEVKQICKIAFSFQHATVGL 182
The following BLAST results are available for this feature:
BLAST of EWM26424.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108462|gb|EWM26424.1|7.714e-130100.00hypothetical protein Naga_100668g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4260rna4260Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications