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Properties
| Property Name | Value |
|---|
| Product | Ankyrin repeat-containing domain protein |
| Orig transcript id | gnl|cribi|Naga_100344g4.10760.mrna |
| Orig protein id | gnl|cribi|Naga_100344g4.10760 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:64554..66287 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4244 ID=rna4244|Name=rna4244|organism=Nannochloropsis gaditana|type=mRNA|length=456bp
ATGCCTTCACAAAGATGGGTGCCCTCAATCCCAGCCGAGTACAGCATCAT
GTCCAAGAACCCCCCGCCCATCACCATCGTCATGGATGGGGGAGGCAACG
ATGTGATCAGCGTGAAAGACGACTGCTTGTCTTTCAACGACCGGTGTCAG
CAGCAGATCAAGGAGGCGACAGACATCCTCGCCGACCTCTTGGAGAGGAT
GCACGAGGATAAGGTCCAGCATGTCTTGCTCATGGGTCCGTACTATCTAG
AGAATCTGAACAAGGCCGTCGACGAGGGGTTCAAGCTACTCTCCAATGTG
TGCAAGAACGCGACCATTGATTGCCACATAGCCGACACCCGAGATCTTGA
TCCGCCCTTGGGGGACGACGGCATTCATCCTATTCAGGAAGGATATGAGC
TCCTGGCTACCCGCATTTGGGAAATCAAACTCGATAATGATATTCCTATT
ATCTAG back to topprotein sequence of rna4244 >rna4244-protein ID=rna4244-protein|Name=rna4244|organism=Nannochloropsis gaditana|type=polypeptide|length=356bp
MSHLPEVPSGPSNPSHGNDRQNQITGQKSSSEEQESRCPISSLLGNFFYT
STSTLSHLPTSNPVGTLSSFLGIDCPLRFGRHASAEQAARKMAGGGVCPL
GFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGT
IYDVSPQAERWAPLCGHDVSRVLAKAVGGSDLNLSHVNQGLAGLSYEEAV
HLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALK
LHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQ
GGDPHRRVALYDGEDAWGATFDGHAGTGALEHKFVRTGKQRTMLKVRQFE
KLLFVL back to topmRNA from alignment at CM002463.1:64554..66287+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4244 ID=rna4244|Name=rna4244|organism=Nannochloropsis gaditana|type=mRNA|length=1734bp|location=Sequence derived from alignment at CM002463.1:64554..66287+ (Nannochloropsis gaditana)
ATGTCACATCTGCCAGAGGTCCCTTCAGGGCCCTCAAATCCTTCACATGG
CAACGACAGGCAGAACCAAATTACGGGGCAGAAGTCGTCCTCTGAGGAAC
AAGAGTCGCGATGCCCTatctcctctcttctcgGCAATTTTTTCTACACT
TCGACCTCCACACTATCACATTTACCCACGAGTAATCCCGTGGGAACGTT
GTCCAGTTTCCTTGGGATTGATTGTCCGTTACGGTTCGGGCGCCATGCAT
CCGCGGAGCAGGCAGCGAGGAAGAtggcgggagggggcgtaTGCCCTCTC
GGATTTGGGAAGCGTCAGACCATTGCGGATAGTCAAAGCAGTAATGGGAC
CGAGGAGAGTGCGAACTCACCAtcaattcctctccctgaGATGACCCTGG
CGAGGCTTCGGGACCACGCAcaccttcatctcctctccGTCAAAGGCACG
ATATATGATGTCTCGCCTCAGGCAGAAGTAAGGACACTGCTGACGATGGC
ATGGAAATGCTTTGAGATTGTCCTGGCATATTTCTGTATGTTTATCTCTT
AGTTTCCCCtcacctctttccccctcgcaTTCCTCACGTCCCTCTCTCAA
tcccacttcccccccccctcgctcccgcatCCGTTTTTGTTCTTATTTGT
GCACCACGTCCCAGAGATGGGCGCCTCTGTGTGGTCATGACGTAAGTCGA
GTCCTAGCCAAGGCTGTGGGCGGCAGTGATCTCAATCTCTCCCATGTCAA
CCAGGTACGTAGGATGAGCCCCAAAagtggacggagagggggactAGCGC
CGTCCTAACTCTGATCgtgcggaagaaggggagggctaGAGTCGAGCAGT
CACGGCCATGGAGAGGGTCCGAGTCAATGCGGAGGCCTGATATCGAGAGC
ACTGAAGTCTTTTTCTTGCACTCCCCCGCCACGCACAGGGCTTGGCAGGG
CTCTCGTACGAGGAAGCAGTGCATTTGGAGAAAGTGGTGGCAGCGATGGA
GCAGAGTTTCCGAGCcgttgctctccttcccccccaggAACAGCACTTGC
TCTTCGCCTCGactgtgggagagggcgcgaCGGAGgtcgtgagggaggga
aaggaggacgacgccttGAAATTGCATGCGCTGattgaggaaggaggctc
tTTAGAAAGTATCAGGTGAGCGGCGGGGAGGTATATGTTTAGGTAATATT
AGATCAAAGATAAACGGATCGATTTGACCTGAATCGTGTCTCATTCCTAg
cgtcccgcccgccctcccttccccacccgcctccctctttagCTCCCTCC
TCAGTCCCTCCACCGTCAACCTACCTTGTCCCCGCAcgggccttcctcct
ctgcacaAGGCGAtcgaggtagggagggaggtggaggtgctccgccttct
cctccagcagggcGGGGACCCTCATCGGCGCGTTGCCCTTTacgatgggg
aggatgcgTGGGGTCTCGCGTCTCGATTccagagaggagaggaggtgctA
AAAGTGCTTGATAGAAGCGAGACGCCCGCGCCGGCGCTCCCAAGTTGAGT
TTCGCGCCATATTTTGGAAGGCGTTGAGTCTGGAGGTAGAGGCACGTGAT
GTATAATTTGAATAGGTGCGACTTTTGACGGTCATGCAGGCACTGGGGCT
CTAGAACATAAGTTTGTGAGGACTGGAAAGCAAAGAACGATGCTGAAAGT
CAGGCAATTTGAAAAGTTGTTATTTGTTCTTTAA back to topCoding sequence (CDS) from alignment at CM002463.1:64554..66287+ >rna4244 ID=rna4244|Name=rna4244|organism=Nannochloropsis gaditana|type=CDS|length=5355bp|location=Sequence derived from alignment at CM002463.1:64554..66287+ (Nannochloropsis gaditana)
ATGTCACATCTGCCAGAGGTCCCTTCAGGGCCCTCAAATCCTTCACATGG
CAACGACAGGCAGAACCAAATTACGGGGCAGAAGTCGTCCTCTGAGGAAC
AAGAGTCGCGATGCCCTatctcctctcttctcgGCAATTTTTTCTACACT
TCGACCTCCACACTATCACATTTACCCACGAGTAATCCCGTGGGAACGTT
GTCCAGTTTCCTTGGGATTGATTGTCCGTTACGGTTCGGGCGCCATGCAT
CCGCGGAGCAGGCAGCGAGGAAGAtggcgggagggggcgtaTGCCCTCTC
GGATTTGGGAAGCGTCAGACCATTGCGGATAGTCAAAGCAGTAATGGGAC
CGAGGAGAGTGCGAACTCACCAtcaattcctctccctgaGATGACCCTGG
CGAGGCTTCGGGACCACGCAcaccttcatctcctctccGTCAAAGGCACG
ATATATGATGTCTCGCCTCAGGCAGAAAGATGGGCGCCTCTGTGTGGTCA
TGACGTAAGTCGAGTCCTAGCCAAGGCTGTGGGCGGCAGTGATCTCAATC
TCTCCCATGTCAACCAGGGCTTGGCAGGGCTCTCGTACGAGGAAGCAGTG
CATTTGGAGAAAGTGGTGGCAGCGATGGAGCAGAGTTTCCGAGCcgttgc
tctccttcccccccaggAACAGCACTTGCTCTTCGCCTCGactgtgggag
agggcgcgaCGGAGgtcgtgagggagggaaaggaggacgacgccttGAAA
TTGCATGCGCTGattgaggaaggaggctctTTAGAAAGTATCAGTCCCTC
CACCGTCAACCTACCTTGTCCCCGCAcgggccttcctcctctgcacaAGG
CGAtcgaggtagggagggaggtggaggtgctccgccttctcctccagcag
ggcGGGGACCCTCATCGGCGCGTTGCCCTTTacgatggggaggatgcgTG
GGGTGCGACTTTTGACGGTCATGCAGGCACTGGGGCTCTAGAACATAAGT
TTGTGAGGACTGGAAAGCAAAGAACGATGCTGAAAGTCAGGCAATTTGAA
AAGTTGTTATTTGTTCTTTAAATGTCACATCTGCCAGAGGTCCCTTCAGG
GCCCTCAAATCCTTCACATGGCAACGACAGGCAGAACCAAATTACGGGGC
AGAAGTCGTCCTCTGAGGAACAAGAGTCGCGATGCCCTatctcctctctt
ctcgGCAATTTTTTCTACACTTCGACCTCCACACTATCACATTTACCCAC
GAGTAATCCCGTGGGAACGTTGTCCAGTTTCCTTGGGATTGATTGTCCGT
TACGGTTCGGGCGCCATGCATCCGCGGAGCAGGCAGCGAGGAAGAtggcg
ggagggggcgtaTGCCCTCTCGGATTTGGGAAGCGTCAGACCATTGCGGA
TAGTCAAAGCAGTAATGGGACCGAGGAGAGTGCGAACTCACCAtcaattc
ctctccctgaGATGACCCTGGCGAGGCTTCGGGACCACGCAcaccttcat
ctcctctccGTCAAAGGCACGATATATGATGTCTCGCCTCAGGCAGAAAG
ATGGGCGCCTCTGTGTGGTCATGACGTAAGTCGAGTCCTAGCCAAGGCTG
TGGGCGGCAGTGATCTCAATCTCTCCCATGTCAACCAGGGCTTGGCAGGG
CTCTCGTACGAGGAAGCAGTGCATTTGGAGAAAGTGGTGGCAGCGATGGA
GCAGAGTTTCCGAGCcgttgctctccttcccccccaggAACAGCACTTGC
TCTTCGCCTCGactgtgggagagggcgcgaCGGAGgtcgtgagggaggga
aaggaggacgacgccttGAAATTGCATGCGCTGattgaggaaggaggctc
tTTAGAAAGTATCAGTCCCTCCACCGTCAACCTACCTTGTCCCCGCAcgg
gccttcctcctctgcacaAGGCGAtcgaggtagggagggaggtggaggtg
ctccgccttctcctccagcagggcGGGGACCCTCATCGGCGCGTTGCCCT
TTacgatggggaggatgcgTGGGGTGCGACTTTTGACGGTCATGCAGGCA
CTGGGGCTCTAGAACATAAGTTTGTGAGGACTGGAAAGCAAAGAACGATG
CTGAAAGTCAGGCAATTTGAAAAGTTGTTATTTGTTCTTTAAATGTCACA
TCTGCCAGAGGTCCCTTCAGGGCCCTCAAATCCTTCACATGGCAACGACA
GGCAGAACCAAATTACGGGGCAGAAGTCGTCCTCTGAGGAACAAGAGTCG
CGATGCCCTatctcctctcttctcgGCAATTTTTTCTACACTTCGACCTC
CACACTATCACATTTACCCACGAGTAATCCCGTGGGAACGTTGTCCAGTT
TCCTTGGGATTGATTGTCCGTTACGGTTCGGGCGCCATGCATCCGCGGAG
CAGGCAGCGAGGAAGAtggcgggagggggcgtaTGCCCTCTCGGATTTGG
GAAGCGTCAGACCATTGCGGATAGTCAAAGCAGTAATGGGACCGAGGAGA
GTGCGAACTCACCAtcaattcctctccctgaGATGACCCTGGCGAGGCTT
CGGGACCACGCAcaccttcatctcctctccGTCAAAGGCACGATATATGA
TGTCTCGCCTCAGGCAGAAAGATGGGCGCCTCTGTGTGGTCATGACGTAA
GTCGAGTCCTAGCCAAGGCTGTGGGCGGCAGTGATCTCAATCTCTCCCAT
GTCAACCAGGGCTTGGCAGGGCTCTCGTACGAGGAAGCAGTGCATTTGGA
GAAAGTGGTGGCAGCGATGGAGCAGAGTTTCCGAGCcgttgctctccttc
ccccccaggAACAGCACTTGCTCTTCGCCTCGactgtgggagagggcgcg
aCGGAGgtcgtgagggagggaaaggaggacgacgccttGAAATTGCATGC
GCTGattgaggaaggaggctctTTAGAAAGTATCAGTCCCTCCACCGTCA
ACCTACCTTGTCCCCGCAcgggccttcctcctctgcacaAGGCGAtcgag
gtagggagggaggtggaggtgctccgccttctcctccagcagggcGGGGA
CCCTCATCGGCGCGTTGCCCTTTacgatggggaggatgcgTGGGGTGCGA
CTTTTGACGGTCATGCAGGCACTGGGGCTCTAGAACATAAGTTTGTGAGG
ACTGGAAAGCAAAGAACGATGCTGAAAGTCAGGCAATTTGAAAAGTTGTT
ATTTGTTCTTTAAATGTCACATCTGCCAGAGGTCCCTTCAGGGCCCTCAA
ATCCTTCACATGGCAACGACAGGCAGAACCAAATTACGGGGCAGAAGTCG
TCCTCTGAGGAACAAGAGTCGCGATGCCCTatctcctctcttctcgGCAA
TTTTTTCTACACTTCGACCTCCACACTATCACATTTACCCACGAGTAATC
CCGTGGGAACGTTGTCCAGTTTCCTTGGGATTGATTGTCCGTTACGGTTC
GGGCGCCATGCATCCGCGGAGCAGGCAGCGAGGAAGAtggcgggaggggg
cgtaTGCCCTCTCGGATTTGGGAAGCGTCAGACCATTGCGGATAGTCAAA
GCAGTAATGGGACCGAGGAGAGTGCGAACTCACCAtcaattcctctccct
gaGATGACCCTGGCGAGGCTTCGGGACCACGCAcaccttcatctcctctc
cGTCAAAGGCACGATATATGATGTCTCGCCTCAGGCAGAAAGATGGGCGC
CTCTGTGTGGTCATGACGTAAGTCGAGTCCTAGCCAAGGCTGTGGGCGGC
AGTGATCTCAATCTCTCCCATGTCAACCAGGGCTTGGCAGGGCTCTCGTA
CGAGGAAGCAGTGCATTTGGAGAAAGTGGTGGCAGCGATGGAGCAGAGTT
TCCGAGCcgttgctctccttcccccccaggAACAGCACTTGCTCTTCGCC
TCGactgtgggagagggcgcgaCGGAGgtcgtgagggagggaaaggagga
cgacgccttGAAATTGCATGCGCTGattgaggaaggaggctctTTAGAAA
GTATCAGTCCCTCCACCGTCAACCTACCTTGTCCCCGCAcgggccttcct
cctctgcacaAGGCGAtcgaggtagggagggaggtggaggtgctccgcct
tctcctccagcagggcGGGGACCCTCATCGGCGCGTTGCCCTTTacgatg
gggaggatgcgTGGGGTGCGACTTTTGACGGTCATGCAGGCACTGGGGCT
CTAGAACATAAGTTTGTGAGGACTGGAAAGCAAAGAACGATGCTGAAAGT
CAGGCAATTTGAAAAGTTGTTATTTGTTCTTTAAATGTCACATCTGCCAG
AGGTCCCTTCAGGGCCCTCAAATCCTTCACATGGCAACGACAGGCAGAAC
CAAATTACGGGGCAGAAGTCGTCCTCTGAGGAACAAGAGTCGCGATGCCC
TatctcctctcttctcgGCAATTTTTTCTACACTTCGACCTCCACACTAT
CACATTTACCCACGAGTAATCCCGTGGGAACGTTGTCCAGTTTCCTTGGG
ATTGATTGTCCGTTACGGTTCGGGCGCCATGCATCCGCGGAGCAGGCAGC
GAGGAAGAtggcgggagggggcgtaTGCCCTCTCGGATTTGGGAAGCGTC
AGACCATTGCGGATAGTCAAAGCAGTAATGGGACCGAGGAGAGTGCGAAC
TCACCAtcaattcctctccctgaGATGACCCTGGCGAGGCTTCGGGACCA
CGCAcaccttcatctcctctccGTCAAAGGCACGATATATGATGTCTCGC
CTCAGGCAGAAAGATGGGCGCCTCTGTGTGGTCATGACGTAAGTCGAGTC
CTAGCCAAGGCTGTGGGCGGCAGTGATCTCAATCTCTCCCATGTCAACCA
GGGCTTGGCAGGGCTCTCGTACGAGGAAGCAGTGCATTTGGAGAAAGTGG
TGGCAGCGATGGAGCAGAGTTTCCGAGCcgttgctctccttcccccccag
gAACAGCACTTGCTCTTCGCCTCGactgtgggagagggcgcgaCGGAGgt
cgtgagggagggaaaggaggacgacgccttGAAATTGCATGCGCTGattg
aggaaggaggctctTTAGAAAGTATCAGTCCCTCCACCGTCAACCTACCT
TGTCCCCGCAcgggccttcctcctctgcacaAGGCGAtcgaggtagggag
ggaggtggaggtgctccgccttctcctccagcagggcGGGGACCCTCATC
GGCGCGTTGCCCTTTacgatggggaggatgcgTGGGGTGCGACTTTTGAC
GGTCATGCAGGCACTGGGGCTCTAGAACATAAGTTTGTGAGGACTGGAAA
GCAAAGAACGATGCTGAAAGTCAGGCAATTTGAAAAGTTGTTATTTGTTC
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