EWM26440.1, cds4234 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|585108484|gb|EWM26440.1| (Ankyrin repeat-containing domain protein [Nannochloropsis gaditana]) HSP 1 Score: 726.857 bits (1875), Expect = 0.000e+0 Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
Query: 1 MSHLPEVPSGPSNPSHGNDRQNQITGQKSSSEEQESRCPISSLLGNFFYTSTSTLSHLPTSNPVGTLSSFLGIDCPLRFGRHASAEQAARKMAGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVSPQAERWAPLCGHDVSRVLAKAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGEDAWGATFDGHAGTGALEHKFVRTGKQRTMLKVRQFEKLLFVL 356
MSHLPEVPSGPSNPSHGNDRQNQITGQKSSSEEQESRCPISSLLGNFFYTSTSTLSHLPTSNPVGTLSSFLGIDCPLRFGRHASAEQAARKMAGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVSPQAERWAPLCGHDVSRVLAKAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGEDAWGATFDGHAGTGALEHKFVRTGKQRTMLKVRQFEKLLFVL
Sbjct: 1 MSHLPEVPSGPSNPSHGNDRQNQITGQKSSSEEQESRCPISSLLGNFFYTSTSTLSHLPTSNPVGTLSSFLGIDCPLRFGRHASAEQAARKMAGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVSPQAERWAPLCGHDVSRVLAKAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGEDAWGATFDGHAGTGALEHKFVRTGKQRTMLKVRQFEKLLFVL 356
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|567994773|gb|ETL44924.1| (hypothetical protein L916_04884 [Phytophthora parasitica]) HSP 1 Score: 68.9366 bits (167), Expect = 3.092e-9 Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query: 93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
+ GG CPLGFG + + ++ + +D HL + +G YDV+ P ++A GHDV+ LA +++ DL+++ ++EE + LE+ ++F R +A+L EQ+ R G + + +H +I+E +L+S S V+ C RT + PLHKA+E R ++++ L++ G D R ALYD E
Sbjct: 178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDMTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|566028722|gb|ETI51633.1| (hypothetical protein F443_05069 [Phytophthora parasitica P1569] >gi|567966060|gb|ETK91518.1| hypothetical protein L915_04937 [Phytophthora parasitica]) HSP 1 Score: 68.5514 bits (166), Expect = 3.265e-9 Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query: 93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
+ GG CPLGFG + + ++ + +D HL + +G YDV+ P ++A GHDV+ LA +++ DL+++ ++EE + LE+ ++F R +A+L EQ+ R G + + +H +I+E +L+S S V+ C RT + PLHKA+E R ++++ L++ G D R ALYD E
Sbjct: 178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEVDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|570332434|gb|ETO80382.1| (hypothetical protein F444_05116 [Phytophthora parasitica P1976]) HSP 1 Score: 68.5514 bits (166), Expect = 3.512e-9 Identity = 62/242 (25.62%), Postives = 104/242 (42.98%), Query Frame = 0
Query: 93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
+ GG CPLGFG + + ++ + +D HL + +G YDV+ P ++A GHDV+ LA +++ DL+++ ++EE + LE+ R +A+L EQ+ R G + + +H +I+E +L+S S V+ C RT + PLHKA+E R ++++ L++ G D R ALYD E
Sbjct: 178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERYRTFFA---RELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|570956413|gb|ETP21409.1| (hypothetical protein F441_05074 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 68.5514 bits (166), Expect = 3.577e-9 Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query: 93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
+ GG CPLGFG + + ++ + +D HL + +G YDV+ P ++A GHDV+ LA +++ DL+++ ++EE + LE+ ++F R +A+L EQ+ R G + + +H +I+E +L+S S V+ C RT + PLHKA+E R ++++ L++ G D R ALYD E
Sbjct: 178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|568054468|gb|ETM51248.1| (hypothetical protein L914_04888 [Phytophthora parasitica]) HSP 1 Score: 68.5514 bits (166), Expect = 3.643e-9 Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query: 93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
+ GG CPLGFG + + ++ + +D HL + +G YDV+ P ++A GHDV+ LA +++ DL+++ ++EE + LE+ ++F R +A+L EQ+ R G + + +H +I+E +L+S S V+ C RT + PLHKA+E R ++++ L++ G D R ALYD E
Sbjct: 178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|675187085|ref|XP_008902427.1| (hypothetical protein PPTG_09283 [Phytophthora parasitica INRA-310] >gi|568097716|gb|ETN12458.1| hypothetical protein PPTG_09283 [Phytophthora parasitica INRA-310] >gi|570991634|gb|ETP49330.1| hypothetical protein F442_05133 [Phytophthora parasitica P10297]) HSP 1 Score: 68.5514 bits (166), Expect = 4.138e-9 Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query: 93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
+ GG CPLGFG + + ++ + +D HL + +G YDV+ P ++A GHDV+ LA +++ DL+++ ++EE + LE+ ++F R +A+L EQ+ R G + + +H +I+E +L+S S V+ C RT + PLHKA+E R ++++ L++ G D R ALYD E
Sbjct: 178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|568024039|gb|ETL98082.1| (hypothetical protein L917_04784 [Phytophthora parasitica]) HSP 1 Score: 68.1662 bits (165), Expect = 4.371e-9 Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query: 93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
+ GG CPLGFG + + ++ + +D HL + +G YDV+ P ++A GHDV+ LA +++ DL+++ ++EE + LE+ ++F R +A+L EQ+ R G + + +H +I+E +L+S S V+ C RT + PLHKA+E R ++++ L++ G D R ALYD E
Sbjct: 178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|695416496|ref|XP_009526853.1| (hypothetical protein PHYSODRAFT_392324, partial [Phytophthora sojae] >gi|348677978|gb|EGZ17795.1| hypothetical protein PHYSODRAFT_392324, partial [Phytophthora sojae]) HSP 1 Score: 63.1586 bits (152), Expect = 8.355e-8 Identity = 61/237 (25.74%), Postives = 99/237 (41.77%), Query Frame = 0
Query: 98 CPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
CPLGFG + D S E+ + +I + +G YDV+ P+ ++A GHDV+ LA + DL+++ G ++EE + LE+ + V + Q++ G + + + LH ++EE +LE S VN C RT + PLHKA+E R ++++++L+Q G D R ALYD E
Sbjct: 46 CPLGFGAK--TVDKVVSRKAEDVDDMRTI-------------------TFQGRRYDVANSSLFQPEGGQFAHFVGHDVTYALAVHSTRLEDLDVTPSR----GHTFEEQLLLERYRNFFARELALVEVDAEQKE-----------------SGGQAEVIDLHQVVEESDGVAQEEGVQRVKKALEVASSDQVNAVCSRTTMTPLHKAVEKHR-LDLVKVLVQAGADVKARAALYDDE 239
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|953496334|emb|CEG41934.1| (ankyrin repeat-containing domain protein [Plasmopara halstedii]) HSP 1 Score: 63.929 bits (154), Expect = 1.283e-7 Identity = 63/233 (27.04%), Postives = 103/233 (44.21%), Query Frame = 0
Query: 91 KMAGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVRE--GKEDDALKLHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
+ + GG CPLGFG + TE + L +R+ ++ +G YDV+ P+ ++A GHD++ LA ++ DL++ ++EE V LE+ A R + LL + + + +V T V + K D + + +L+ S + VN C RT + PLHKA+E R ++++ LL+ G D R ALYD E
Sbjct: 176 RRSTGGKCPLGFGSK-----------TESKVVT-------YNLETIRNRRYIKF---QGRCYDVTDSNLFHPKDGQFAHFVGHDITYALAIQSARQEDLDVIPNR----AYTFEEQVLLERYRKAFA---RELFLLEVENEEM---ESVARTETVNVHQIIEKSDSMTQKECVHRLKRALDKASNAQVNAVCSRTTMTPLHKAVEKNR-LDLVEELLRAGADVEARAALYDDE 376 The following BLAST results are available for this feature:
BLAST of EWM26440.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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