EWM26440.1, cds4234 (CDS) Nannochloropsis gaditana

Overview
NameEWM26440.1
Unique Namecds4234
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:64554..65030 +
Alignment locationCM002463.1:65218..65307 +
Alignment locationCM002463.1:65492..65718 +
Alignment locationCM002463.1:65858..66015 +
Alignment locationCM002463.1:66169..66287 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26440.1
ProductAnkyrin repeat-containing domain protein
Orig transcript idgnl|cribi|Naga_100344g4.10760.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:64554..65030 +
CM002463.1supercontigCM002463.1:65218..65307 +
CM002463.1supercontigCM002463.1:65492..65718 +
CM002463.1supercontigCM002463.1:65858..66015 +
CM002463.1supercontigCM002463.1:66169..66287 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
IPR001199Cyt_B5-like_heme/steroid-bd
Homology
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|585108484|gb|EWM26440.1| (Ankyrin repeat-containing domain protein [Nannochloropsis gaditana])

HSP 1 Score: 726.857 bits (1875), Expect = 0.000e+0
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0
Query:    1 MSHLPEVPSGPSNPSHGNDRQNQITGQKSSSEEQESRCPISSLLGNFFYTSTSTLSHLPTSNPVGTLSSFLGIDCPLRFGRHASAEQAARKMAGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVSPQAERWAPLCGHDVSRVLAKAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGEDAWGATFDGHAGTGALEHKFVRTGKQRTMLKVRQFEKLLFVL 356
            MSHLPEVPSGPSNPSHGNDRQNQITGQKSSSEEQESRCPISSLLGNFFYTSTSTLSHLPTSNPVGTLSSFLGIDCPLRFGRHASAEQAARKMAGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVSPQAERWAPLCGHDVSRVLAKAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGEDAWGATFDGHAGTGALEHKFVRTGKQRTMLKVRQFEKLLFVL
Sbjct:    1 MSHLPEVPSGPSNPSHGNDRQNQITGQKSSSEEQESRCPISSLLGNFFYTSTSTLSHLPTSNPVGTLSSFLGIDCPLRFGRHASAEQAARKMAGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVSPQAERWAPLCGHDVSRVLAKAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGEDAWGATFDGHAGTGALEHKFVRTGKQRTMLKVRQFEKLLFVL 356          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|567994773|gb|ETL44924.1| (hypothetical protein L916_04884 [Phytophthora parasitica])

HSP 1 Score: 68.9366 bits (167), Expect = 3.092e-9
Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query:   93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            + GG CPLGFG +                      + ++ +   +D  HL  +  +G  YDV+      P   ++A   GHDV+  LA +++   DL+++         ++EE + LE+      ++F  R +A+L   EQ+               R G   + + +H +I+E               +L+S S   V+  C RT + PLHKA+E  R ++++  L++ G D   R ALYD E
Sbjct:  178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDMTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|566028722|gb|ETI51633.1| (hypothetical protein F443_05069 [Phytophthora parasitica P1569] >gi|567966060|gb|ETK91518.1| hypothetical protein L915_04937 [Phytophthora parasitica])

HSP 1 Score: 68.5514 bits (166), Expect = 3.265e-9
Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query:   93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            + GG CPLGFG +                      + ++ +   +D  HL  +  +G  YDV+      P   ++A   GHDV+  LA +++   DL+++         ++EE + LE+      ++F  R +A+L   EQ+               R G   + + +H +I+E               +L+S S   V+  C RT + PLHKA+E  R ++++  L++ G D   R ALYD E
Sbjct:  178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEVDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|570332434|gb|ETO80382.1| (hypothetical protein F444_05116 [Phytophthora parasitica P1976])

HSP 1 Score: 68.5514 bits (166), Expect = 3.512e-9
Identity = 62/242 (25.62%), Postives = 104/242 (42.98%), Query Frame = 0
Query:   93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            + GG CPLGFG +                      + ++ +   +D  HL  +  +G  YDV+      P   ++A   GHDV+  LA +++   DL+++         ++EE + LE+         R +A+L   EQ+               R G   + + +H +I+E               +L+S S   V+  C RT + PLHKA+E  R ++++  L++ G D   R ALYD E
Sbjct:  178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERYRTFFA---RELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|570956413|gb|ETP21409.1| (hypothetical protein F441_05074 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 68.5514 bits (166), Expect = 3.577e-9
Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query:   93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            + GG CPLGFG +                      + ++ +   +D  HL  +  +G  YDV+      P   ++A   GHDV+  LA +++   DL+++         ++EE + LE+      ++F  R +A+L   EQ+               R G   + + +H +I+E               +L+S S   V+  C RT + PLHKA+E  R ++++  L++ G D   R ALYD E
Sbjct:  178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|568054468|gb|ETM51248.1| (hypothetical protein L914_04888 [Phytophthora parasitica])

HSP 1 Score: 68.5514 bits (166), Expect = 3.643e-9
Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query:   93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            + GG CPLGFG +                      + ++ +   +D  HL  +  +G  YDV+      P   ++A   GHDV+  LA +++   DL+++         ++EE + LE+      ++F  R +A+L   EQ+               R G   + + +H +I+E               +L+S S   V+  C RT + PLHKA+E  R ++++  L++ G D   R ALYD E
Sbjct:  178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|675187085|ref|XP_008902427.1| (hypothetical protein PPTG_09283 [Phytophthora parasitica INRA-310] >gi|568097716|gb|ETN12458.1| hypothetical protein PPTG_09283 [Phytophthora parasitica INRA-310] >gi|570991634|gb|ETP49330.1| hypothetical protein F442_05133 [Phytophthora parasitica P10297])

HSP 1 Score: 68.5514 bits (166), Expect = 4.138e-9
Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query:   93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            + GG CPLGFG +                      + ++ +   +D  HL  +  +G  YDV+      P   ++A   GHDV+  LA +++   DL+++         ++EE + LE+      ++F  R +A+L   EQ+               R G   + + +H +I+E               +L+S S   V+  C RT + PLHKA+E  R ++++  L++ G D   R ALYD E
Sbjct:  178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|568024039|gb|ETL98082.1| (hypothetical protein L917_04784 [Phytophthora parasitica])

HSP 1 Score: 68.1662 bits (165), Expect = 4.371e-9
Identity = 63/244 (25.82%), Postives = 107/244 (43.85%), Query Frame = 0
Query:   93 AGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSF--RAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            + GG CPLGFG +                      + ++ +   +D  HL  +  +G  YDV+      P   ++A   GHDV+  LA +++   DL+++         ++EE + LE+      ++F  R +A+L   EQ+               R G   + + +H +I+E               +L+S S   V+  C RT + PLHKA+E  R ++++  L++ G D   R ALYD E
Sbjct:  178 SSGGKCPLGFGAK---------------------TVSKVVIRSAKDVKHLRTIMFQGRHYDVTDSSLFHPDGGQFAHFVGHDVTYALAVQSIRVEDLDVTPER----AYTFEEQLLLERY-----RNFFARELAILEIDEQN---------------RNGNTTEVVNVHQVIDESDNMAQGECVQHLKKALDSASAEQVSAICARTTMTPLHKAVEKHR-LDLVEELVRAGADLEARAALYDDE 375          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|695416496|ref|XP_009526853.1| (hypothetical protein PHYSODRAFT_392324, partial [Phytophthora sojae] >gi|348677978|gb|EGZ17795.1| hypothetical protein PHYSODRAFT_392324, partial [Phytophthora sojae])

HSP 1 Score: 63.1586 bits (152), Expect = 8.355e-8
Identity = 61/237 (25.74%), Postives = 99/237 (41.77%), Query Frame = 0
Query:   98 CPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVREGKEDDALKLHALIEEGG-------------SLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            CPLGFG +    D   S   E+  +  +I                   + +G  YDV+      P+  ++A   GHDV+  LA  +    DL+++       G ++EE + LE+      +    V +   Q++                  G + + + LH ++EE               +LE  S   VN  C RT + PLHKA+E  R ++++++L+Q G D   R ALYD E
Sbjct:   46 CPLGFGAK--TVDKVVSRKAEDVDDMRTI-------------------TFQGRRYDVANSSLFQPEGGQFAHFVGHDVTYALAVHSTRLEDLDVTPSR----GHTFEEQLLLERYRNFFARELALVEVDAEQKE-----------------SGGQAEVIDLHQVVEESDGVAQEEGVQRVKKALEVASSDQVNAVCSRTTMTPLHKAVEKHR-LDLVKVLVQAGADVKARAALYDDE 239          
BLAST of EWM26440.1 vs. NCBI_GenBank
Match: gi|953496334|emb|CEG41934.1| (ankyrin repeat-containing domain protein [Plasmopara halstedii])

HSP 1 Score: 63.929 bits (154), Expect = 1.283e-7
Identity = 63/233 (27.04%), Postives = 103/233 (44.21%), Query Frame = 0
Query:   91 KMAGGGVCPLGFGKRQTIADSQSSNGTEESANSPSIPLPEMTLARLRDHAHLHLLSVKGTIYDVS------PQAERWAPLCGHDVSRVLA-KAVGGSDLNLSHVNQGLAGLSYEEAVHLEKVVAAMEQSFRAVALLPPQEQHLLFASTVGEGATEVVRE--GKEDDALKLHALIEEGGSLESISPSTVNLPCPRTGLPPLHKAIEVGREVEVLRLLLQQGGDPHRRVALYDGE 314
            + + GG CPLGFG +           TE    +         L  +R+  ++     +G  YDV+      P+  ++A   GHD++  LA ++    DL++          ++EE V LE+   A     R + LL  + + +    +V    T  V +   K D   +   +     +L+  S + VN  C RT + PLHKA+E  R ++++  LL+ G D   R ALYD E
Sbjct:  176 RRSTGGKCPLGFGSK-----------TESKVVT-------YNLETIRNRRYIKF---QGRCYDVTDSNLFHPKDGQFAHFVGHDITYALAIQSARQEDLDVIPNR----AYTFEEQVLLERYRKAFA---RELFLLEVENEEM---ESVARTETVNVHQIIEKSDSMTQKECVHRLKRALDKASNAQVNAVCSRTTMTPLHKAVEKNR-LDLVEELLRAGADVEARAALYDDE 376          
The following BLAST results are available for this feature:
BLAST of EWM26440.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108484|gb|EWM26440.1|0.000e+0100.00Ankyrin repeat-containing domain protein [Nannochl... [more]
gi|567994773|gb|ETL44924.1|3.092e-925.82hypothetical protein L916_04884 [Phytophthora para... [more]
gi|566028722|gb|ETI51633.1|3.265e-925.82hypothetical protein F443_05069 [Phytophthora para... [more]
gi|570332434|gb|ETO80382.1|3.512e-925.62hypothetical protein F444_05116 [Phytophthora para... [more]
gi|570956413|gb|ETP21409.1|3.577e-925.82hypothetical protein F441_05074 [Phytophthora para... [more]
gi|568054468|gb|ETM51248.1|3.643e-925.82hypothetical protein L914_04888 [Phytophthora para... [more]
gi|675187085|ref|XP_008902427.1|4.138e-925.82hypothetical protein PPTG_09283 [Phytophthora para... [more]
gi|568024039|gb|ETL98082.1|4.371e-925.82hypothetical protein L917_04784 [Phytophthora para... [more]
gi|695416496|ref|XP_009526853.1|8.355e-825.74hypothetical protein PHYSODRAFT_392324, partial [P... [more]
gi|953496334|emb|CEG41934.1|1.283e-727.04ankyrin repeat-containing domain protein [Plasmopa... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4244rna4244Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications