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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100344g1.10761.mrna |
| Orig protein id | gnl|cribi|Naga_100344g1.10761 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:55434..57137 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4241 ID=rna4241|Name=rna4241|organism=Nannochloropsis gaditana|type=mRNA|length=1148bp
CCTCCTCGTCAAGACGGCCACCTGTGTTTCTTGTCTGGGCGCCTGTGCCG
CCTACATCACTTTCGTTGCCGGGATGCTGCTTCAGCTCTTTCCGGCATGG
AGCGAGAGGGGAATCCTCTTGGCCCTTCTGCCGCCCTTCGTCCTCCTCTC
CTGGGTCCGCGGCTTCCGGCGCCTCTCCTTTTTGAATGTGCTGGGAAATG
CCTCGCTCGTTCTGGGCATTATTGCCATCTTCCTCGACGGTTTTTCTCGC
CTCGTAGCTCCCTCCTCCTCCACTTTTCCCCCCGTCTCGTCCTCCTTGTC
CTCCGCTCCTAAGCCTCCCACCCCTACGGCCCTGTCTCCCGCTCCCTCCT
CGCCCTCGTTTTCCCTCTCCACCCGCGGTATCCACCTTGTACGACCCCAA
ACCCTCCTCCTCTTTTTTGGGCCCACCGCCTTTCTTTTCGTTGTCCACTA
CTGCGCTCTACCAATCGAATCCGAGGCGAAACGTCCCGAAGACTTCAAGC
GAGCCCTAGGACTCTCCATGAGCCTCACAGCTGCCCTGGACGTGGCTATC
GGAGCGGCTGGCTACATCTTCTATGGGGGACTGTCCCCCTTGGTGAGGGA
CCAGGCAGGGCAAGTGGTACCCGGATGTGAGCGACCCGTGTGCGATAACG
TCCTCAAAAACATCAGCCCCGGACCCCTCAAAACTATCATCTTCGCCGCG
TTTTCTATCAATCTGACGTTGACCTACGTCATCATGCTGGCCCCGCCTCG
GGAGTACGTGGAAGAGGCGATGGTCCGAGGCGACAGTATAATTTCAAGCA
AATGGCAGCGAAATATATGGCGTTCAGTCCTCGTCATCTTCACCTTCATG
GTCGCTTCCTCTGTCCATCAGTTTGGCCTTATCACTGCCTTTGTAGGGGC
AATCACGGACACTCTGCAAGGCTTTGTGCTCCCACCCTTGATTTATGCTG
CCACCTTTGCCGTTTGGATGCCAAAGGCAGAGAAGGCGCTAATGATTACC
ATGAGTACGCTTGGTATCGTGTTGATGCTGACCGCCACGTATCAGAATAT
GAGGGAGTTGGAGAACTTGGTCCTCAGGTAGTCGATTGATAACAAAGTGA
ATCTGTGCATATTCAAAGTAAATCAAGAAATTCAGGAATGTTCTTTTC back to topprotein sequence of rna4241 >rna4241-protein ID=rna4241-protein|Name=rna4241|organism=Nannochloropsis gaditana|type=polypeptide|length=151bp
MTEGLYEAVREQLLCQAERVCDLENSLLQARRITCEVDRRFASFASSLPS
PLPPALPSPHGTLSSGVTDNGSRDGKEGEDEEVGMHGRKEEMQESLDRLG
GRIRLFAAQALGDAWRGYQVGKEGEMMRGGKGDGEHEEGRKRRHISFFVG
S back to topmRNA from alignment at CM002463.1:55434..57137+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4241 ID=rna4241|Name=rna4241|organism=Nannochloropsis gaditana|type=mRNA|length=1704bp|location=Sequence derived from alignment at CM002463.1:55434..57137+ (Nannochloropsis gaditana)
ttcctcccctcctccctccttccctccctccctccctccctccctccctc
cctccctccctcagacCCTGCATCGGCCTCTGCCttgacctccctcctgg
ccagAGCCAAGAGCATGGCAGTAGAAGCCATACGGAGGGCCTTTCAGGAG
CTGGTCTCTGAGGCGAgtggggcgggagaaggaaagggagggagggagct
aCAAATGATCATGACCATTTCCTCCGGTGCTCTTCTCACAGGATGAGGAC
CTGGACCTGAGTCAGTCCGCTTTCTGCAACAAGGACCctcaatccctccc
ccccccctcctctccccttcccctcggccttcttcgccgtggTTGGCCTC
CCCCATTCCCGTGATCGAGGAAACGGGCGCCACCAGGGAggtgtgggggg
agggcgggaacgcGTGGGAGAAGAGCGTGGCGGACGGGATCGAGCCCGGG
GTGGGGGACCGCGGCCatctggaagaaggggggagggaggaagggagaga
gggaaggaaggagtgcGGGGCTCGACCCTGTCGGGAACTGCAGAAGGCGA
TGACGGAAGGACTCTACGAAGCAGTGAGGGAGCAGCTCCTGTGTCAAGCA
GAGCGGGTacaggcgggaggcagggaaaggggggaaagtgggagggaggg
agggagggagggagaaagaggcaatGCATGCATCCGCGTCACAGGTGAAG
TGACAATGAATCCACTTTCCGCCACCTgctgtcccttccttctctgaGCC
CTTCCGGCGTCTCCTTCAtctcgtctctccctcttggctcCTTTCCAACC
CCAGGTCTGCGACTTGGAgaactccctccttcaagcccgCCGCATCACCT
GCGAGGTCGATCGCCGCTTcgcgtccttcgcctcctccctcccttcccct
ctccctccggccctcccttctccccacgGAACGCTCTCCTCCGGCGTCAC
CGACAACGGAAGCcgggacgggaaggaaggggaggatgaggaagtaGGAA
TGCACGGGCGAAAAGAGGAAATGCAAGAGAGCTTGGACCGGCTGGGTGGG
CGGATTCGGCTGTTTGCGGCACAGGCGCTGGGAGATGCTTGGAGAGGCTA
CCaggtagggaaagagggagagatgatgaggggagggaaaggtgacGGGG
AacatgaggaagggaggaaaagacggcACATTTCTTTTTTCGTTGGATCA
TAGTTGCGTGAAGTTTTGTAATGATTTCATGATGATTTTTCCCTTCATAC
GCAGCGGCGACGGCTTAGGCAggcctggtggtgctggtccCTTTCGCTTG
CTCCGACCGAGGactgtgggaaggagggaggaagaaaggaagcggcggga
GTAGTCAGAGAGGAGTGCGGGGTACTCGCAAGTTGATGGGAGATTTAGAG
CTttcaaggggaagggggaggtttTTAATTAGCGTTAGAACGGTTAGCAC
TCAAGTGTACAGGGGCTGACGCATGGGGTTGTTGCCTTCGAAATGGTGGA
AAGATACGAAATGAAAAGGGAAACAGGGACGAAAAAGCTCGCAGCGAGGG
ATAAACGGGTGTGAAGGAAAGGCTTTTAAAGGAGTTCGAGGCTGTAGAAA
TGGTAAAATGAAGCTTAGAGGGTAGCAAGAAGCACGAAAATGACGCGTTT
TGTATCGCCGATTGCTCGATTTTTGGTCGAGTTTGACCCCAGCCGTTACA
TTTC back to topCoding sequence (CDS) from alignment at CM002463.1:55434..57137+ >rna4241 ID=rna4241|Name=rna4241|organism=Nannochloropsis gaditana|type=CDS|length=912bp|location=Sequence derived from alignment at CM002463.1:55434..57137+ (Nannochloropsis gaditana)
ATGACGGAAGGACTCTACGAAGCAGTGAGGGAGCAGCTCCTGTGTCAAGC
AGAGCGGGTCTGCGACTTGGAgaactccctccttcaagcccgCCGCATCA
CCTGCGAGGTCGATCGCCGCTTcgcgtccttcgcctcctccctcccttcc
cctctccctccggccctcccttctccccacgGAACGCTCTCCTCCGGCGT
CACCGACAACGGAAGCcgggacgggaaggaaggggaggatgaggaagtaG
GAATGCACGGGCGAAAAGAGGAAATGCAAGAGAGCTTGGACCGGCTGGGT
GGGCGGATTCGGCTGTTTGCGGCACAGGCGCTGGGAGATGCTTGGAGAGG
CTACCaggtagggaaagagggagagatgatgaggggagggaaaggtgacG
GGGAacatgaggaagggaggaaaagacggcACATTTCTTTTTTCGTTGGA
TCATAGATGACGGAAGGACTCTACGAAGCAGTGAGGGAGCAGCTCCTGTG
TCAAGCAGAGCGGGTCTGCGACTTGGAgaactccctccttcaagcccgCC
GCATCACCTGCGAGGTCGATCGCCGCTTcgcgtccttcgcctcctccctc
ccttcccctctccctccggccctcccttctccccacgGAACGCTCTCCTC
CGGCGTCACCGACAACGGAAGCcgggacgggaaggaaggggaggatgagg
aagtaGGAATGCACGGGCGAAAAGAGGAAATGCAAGAGAGCTTGGACCGG
CTGGGTGGGCGGATTCGGCTGTTTGCGGCACAGGCGCTGGGAGATGCTTG
GAGAGGCTACCaggtagggaaagagggagagatgatgaggggagggaaag
gtgacGGGGAacatgaggaagggaggaaaagacggcACATTTCTTTTTTC
GTTGGATCATAG back to top
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