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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100144g4.5968.mrna |
| Orig protein id | gnl|cribi|Naga_100144g4.5968 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:38817..41457 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4235 ID=rna4235|Name=rna4235|organism=Nannochloropsis gaditana|type=mRNA|length=1323bp
GGCCATATTTTATGGCGGATCACGGTTGGCGGTGCTCGCGTGCGTGGCGC
TCGCATTTTGGCACGATAAACTTCTCACATGCTGTCTCGTTTGTCCTTGT
ATCCCTTCCTGTCGCCATTCTTTACAGGAAAGAGCATTTTAATTGATTGG
ACGCAGAGGAGGCAGAGGATCACGTATCCGAAGAGGTAGAAGGCCGCCTC
CAACTTACACGCGCGGCCGCTACTCCACGCAGGAACTCATCGTTAGGCAG
AATCACACATACATTTATAAAACATGCCGCAACATGACTACATGGAACAG
CACCGGAAAAAGCATGGGGAAAGGCTTGATCGGGAAGAGAGATTACGCAA
AAAGGAGGCGCGAGAGGTCCATCGTCGTTCGAAATTTGCCCAGAAAGTAC
ACGGCTTAAGGGCAAAACTGTACAATGCCAAGCGCTACAAAGAGAAAGCC
CAGATGCGTAAAACCCTGGCCATGCATCAGGAGAAGACCAATAAACGTGC
CAATCAGGAGGGCGCGCCGGAAGGGGCTGTACCTGCCTATTTGATCGACC
GAGAAGGGATTTCACGTGCGAAGGTCCTCTCTAACTCGGTCAAGCAAAAG
CGGGCGGAGAAGGCAGGAAAATGGAGTGTTCCTTTGCCCAAGGTCAAACC
CGTTGCGGACGATGAAATGTTCAAGGTCATGCAGTCGGGGAAACGCAAAG
CGAAATCTTGGAAGCGGATGGTAACCAAGGTCACCTTTGTGGGCGAGAAC
TTCACGCGGAAGGCGCCCAAATTCGAGCGCTTCATTCGGCCCACAGGGCT
ACGCTTCAAAAAGGCGCACGTCACGCACCCCGACTTGCAGGCGACATTCT
GCTTGGACATTCTGGGCGTCAAGAAGAATCCGTCGTCGCCCATGTACACG
ACCCTGGGGGTTATAACCAAGGGCACCGTTATCGAGGTTAATGTTTCGGA
GTTGGGCCTTGTTACCACGAGCGGGAAGGTTGTGTGGGGAAAATACGCGC
AGGTAACCAACAACCCCGAACTGGACGGATGCATCAATGCGGTTCTCCTG
GTCTAGTCGGTTTCGGGCCGGGGAATAAGGGTGTATGCAGGGGGAAAGCT
TGGAGGAAACCGTGGACAGGATGATTACGAATAGGACGAACAGATGAGGG
TGGTACTGTTGATGAGGGCTGAGCCCGTGTGTGCGGACGTAGGGGGAAGG
AACTAGTGTGGGGGATCGGCGCCGGGTGGACGTTCGAGAGGGCCTCAAGA
ATTGTAAATTGACATGCAGTATGTGTACGAGCGAAGGGACCGAGAAGAAG
AAGACATATTGAGGATCGACACA back to topprotein sequence of rna4235 >rna4235-protein ID=rna4235-protein|Name=rna4235|organism=Nannochloropsis gaditana|type=polypeptide|length=420bp
MSTSAITVPHVMHLPCSILLVLSSLHYTTFAVHSFVGSSFVENSSENEAV
LSTVPDLKSLLPSTGCPRGRGCGLRGGLDQLETSYSFSTSPSPTSSIAYS
NSRDLPNIHEGSREPVITNFAPSRVNLVSATQKTESESTATLSAALPTAT
TLPALLDQDSVVSTVYNQSVQLQKKGAKGKDKMCDPTPVDRRVDQLDLEG
ACVGSWGGFYDRIVSVTFNARTLESQALRISSFCASPCGPLFDRQVREFR
NACQEGLMRMEEQEDEEEEEEEEEMEAGEGEEGTWIPVPSEELLIYRMTG
FIGTFGCAQDTVSGRLCAELIVRSLSASASANVGTPTGVAWTKIGNGKHR
KADREREAAATAQALAKKEKCAYYTSCCFGEMMKTLRLGEQAELVEGLER
VCPGAREAANASCSRSAASG back to topmRNA from alignment at CM002463.1:38817..41457- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4235 ID=rna4235|Name=rna4235|organism=Nannochloropsis gaditana|type=mRNA|length=2641bp|location=Sequence derived from alignment at CM002463.1:38817..41457- (Nannochloropsis gaditana)
ATTAGTATCGCACAACGTCCAAAAATCCAAGGTAGCGAATGCTTAATCAG
CGGCAAAGCGGGAATAACTTGCGGAGGAACAGATCGTGGCATTTTCAATT
TGCCGCCAGGTACACCTTCTCTTTTCGAAACAACAAAGTCCCATGCATTA
TTTTCATCCTGCTGATCGTGAAGGGTGGGCGCTGGTTACATACAAGAGAA
AGACTTACCGATGCCACGTTTTTAGAGGGATCTTCTTGTCGGGTTTGGAC
ATGGTCGGCTTGAACTGCCGAATCCCTACCCCCCCCCTTCGTTTTTTGCA
TTTGAATTGAAACATAGATCTCTATTTTTGAGTCTTCGCATTTCTGATTT
AGGTCAGTTTTTGGAAAAGTAAACCTTTTTTAAATTCTAAATTGACTGCA
ATGTCGACATCGGCTATCACAGTACCGCATGTAATGCATCTGCCATGCTC
GATCCTGCTCGTCCTATCAAGCCTTCACTACACCACTTTTGCTGTCCATT
CATTCGTGGGCTCCAGCTTCGTTGAAAATTCGTCTGAGAATGAAGCGGTT
TTGTCCACGGTACCAGACTTGAAGTCTTTGTTACCCTCCACCGGCTGTCC
CAGAGGTCGAGGTTGCGGCCTACGAGGAGGCCTCGATCAATTGGAAACTT
CATATTCCTTTTCGACATCTCCCTCACCAACCTCGTCCATTGCCTATTCA
AATTCAAGAGATCTACCCAATATCCATGAAGGAAGTAGGGAGCCAGTCAT
TACCAATTTTGCCCCTTCACGTGTTAACCTGGTATCCGCGACTCAAAAGA
CAGAATCTGAAAGCACGGCGACTTTATCAGCTGCATTGCCCACAGCAACC
ACGCTACCTGCCCTCCTTGACCAGGATTCAGTCGTATCTACTGTCTATAA
TCAATCTGTGCAGCTCCAAAAGAAGGGGGCAAAGGGAAAAGACAAAATGT
GCGATCCAACTCCAGTGGACCGGCGCGTGGATCAGCTGGATTTAGAGGGA
GCCTGCGTGGGAAGCTGGGGAGGTTTTTACGACCGCATCGTTAGCGTGAC
GTTCAATGCGCGCACGTTGGAATCGCAGGCATTGAGAATTAGCTCTTTTT
GTGCCTCTCCCTGCGGTCCTTTGTTTGATAGGCAGGTGCGGGAATTTCGG
AACGCATGTCAAGAGGGTTTGATGAGGATGGAAGAGCAGGAGGATGAAGA
GGAGGAGGAAGAGGAGGAGGAGATGGAAGCAGGTGAAGGGGAGGAAGGAA
CATGGATTCCTGTGCCATCAGAGGAGCTGCTGATCTATCGAATGACAGGT
GAGGAGATAATGGCGCTGAAAAGAAGAACAAGGGGAAACAAGTGAATAGA
AAAGGGTGGGGAAAAGACGAAAAGGATGTGACTAGAAAGCAACAAAAGTC
AGAAAGAGGCAACAGACATTCATCCATGCAGCACCACGTAATTTCGGCCT
TAAACCTCCTGATCCACCTCCCTCACCAACCACAGGTTTCATCGGGACCT
TCGGCTGCGCTCAAGACACGGTCTCGGGTCGTCTCTGTGCCGAGCTCATC
GTTCGTTCCCTTTCTGCTTCCGCAAGCGCCAACGTGGGCACTCCTACAGG
TGCCAATTTGGGAAAGGCTGTGTCAGAATTCCTGGTCTCCTCTCTGCTCC
ACTGCCACCATAAACTCATCCCAGCTACCGGCACCTCTCCCAGGGCGCGA
ATCCTTGCTCTCCAAGCACCATGTTCCCACGATCTTCCTCCCTCCCTCCC
TTCTTCTTTCCCTCAGGCGTGGCCTGGACCAAGATCGGCAACGGGAAGCA
TCGGAAAGCCGACCGCGAGAGGGAGGCAGCCGCCACCGCACAGGCCCTGG
CTAAAAAGGAAAAGTGCGCGTACTACACCTCCTGTTGTTTCGGCGAGATG
ATGAAGACGCTGCGACTCGGGGAGCAGGCGGAGTTGGTGGAGGGCTTGGA
GAGGGTGTGCCCGGGTGCGAGGGAGGCAGCGAATGCCTCGTGCAGCAGGA
GTGCAGCCTCGGGGTAGGGAAAGAGGGAAAGAGGGGGGTGTCCTGGGAGC
GAGAAGCTGTAGAATCAAGAGGGGTGGAGACCTAAAGTTGGACTGCTGGC
CTGCAGGAGTGTTCTATATGACTTGAAGTAAATTGTAGAAAATTTTAAGA
CAGATAATCTCCTGCGGGTCAAACAAATACTGGCAAGAAACAGCCGCTCT
TGGATGTTGCGGACATCATCGTAGTGAGATGTGTCGATCCTCAATATGTC
TTCTTCTTCTCGGTCCCTTCGCTCGTACACATACTGCATGTCAATTTACA
ATTCTTGAGGCCCTCTCGAACGTCCACCCGGCGCCGATCCCCCACACTAG
TTCCTTCCCCCTACGTCCGCACACACGGGCTCAGCCCTCATCAACAGTAC
CACCCTCATCTGTTCGTCCTATTCGTAATCATCCTGTCCACGGTTTCCTC
CAAGCTTTCCCCCTGCATACACCCTTATTCCCCGGCCCGAAACCGACTAG
ACCAGGAGAACCGCATTGATGCATCCGTCCAGTTCGGGGTTGTTGGTTAC
CTGATACATGCAGACAGAGTGTGCGGTAAAGGGGTGAGTGTGAAAGTTAT
AACAGGAGCCCAGAATAAAGAAAATTCCCTCATCATCATCT back to topCoding sequence (CDS) from alignment at CM002463.1:38817..41457- >rna4235 ID=rna4235|Name=rna4235|organism=Nannochloropsis gaditana|type=CDS|length=3789bp|location=Sequence derived from alignment at CM002463.1:38817..41457- (Nannochloropsis gaditana)
GCGTGGCCTGGACCAAGATCGGCAACGGGAAGCATCGGAAAGCCGACCGC
GAGAGGGAGGCAGCCGCCACCGCACAGGCCCTGGCTAAAAAGGAAAAGTG
CGCGTACTACACCTCCTGTTGTTTCGGCGAGATGATGAAGACGCTGCGAC
TCGGGGAGCAGGCGGAGTTGGTGGAGGGCTTGGAGAGGGTGTGCCCGGGT
GCGAGGGAGGCAGCGAATGCCTCGTGCAGCAGGAGTGCAGCCTCGGGGTA
GGTTTCATCGGGACCTTCGGCTGCGCTCAAGACACGGTCTCGGGTCGTCT
CTGTGCCGAGCTCATCGTTCGTTCCCTTTCTGCTTCCGCAAGCGCCAACG
TGGGCACTCCTACAGATGTCGACATCGGCTATCACAGTACCGCATGTAAT
GCATCTGCCATGCTCGATCCTGCTCGTCCTATCAAGCCTTCACTACACCA
CTTTTGCTGTCCATTCATTCGTGGGCTCCAGCTTCGTTGAAAATTCGTCT
GAGAATGAAGCGGTTTTGTCCACGGTACCAGACTTGAAGTCTTTGTTACC
CTCCACCGGCTGTCCCAGAGGTCGAGGTTGCGGCCTACGAGGAGGCCTCG
ATCAATTGGAAACTTCATATTCCTTTTCGACATCTCCCTCACCAACCTCG
TCCATTGCCTATTCAAATTCAAGAGATCTACCCAATATCCATGAAGGAAG
TAGGGAGCCAGTCATTACCAATTTTGCCCCTTCACGTGTTAACCTGGTAT
CCGCGACTCAAAAGACAGAATCTGAAAGCACGGCGACTTTATCAGCTGCA
TTGCCCACAGCAACCACGCTACCTGCCCTCCTTGACCAGGATTCAGTCGT
ATCTACTGTCTATAATCAATCTGTGCAGCTCCAAAAGAAGGGGGCAAAGG
GAAAAGACAAAATGTGCGATCCAACTCCAGTGGACCGGCGCGTGGATCAG
CTGGATTTAGAGGGAGCCTGCGTGGGAAGCTGGGGAGGTTTTTACGACCG
CATCGTTAGCGTGACGTTCAATGCGCGCACGTTGGAATCGCAGGCATTGA
GAATTAGCTCTTTTTGTGCCTCTCCCTGCGGTCCTTTGTTTGATAGGCAG
GTGCGGGAATTTCGGAACGCATGTCAAGAGGGTTTGATGAGGATGGAAGA
GCAGGAGGATGAAGAGGAGGAGGAAGAGGAGGAGGAGATGGAAGCAGGTG
AAGGGGAGGAAGGAACATGGATTCCTGTGCCATCAGAGGAGCTGCTGATC
TATCGAATGACAGGCGTGGCCTGGACCAAGATCGGCAACGGGAAGCATCG
GAAAGCCGACCGCGAGAGGGAGGCAGCCGCCACCGCACAGGCCCTGGCTA
AAAAGGAAAAGTGCGCGTACTACACCTCCTGTTGTTTCGGCGAGATGATG
AAGACGCTGCGACTCGGGGAGCAGGCGGAGTTGGTGGAGGGCTTGGAGAG
GGTGTGCCCGGGTGCGAGGGAGGCAGCGAATGCCTCGTGCAGCAGGAGTG
CAGCCTCGGGGTAGGTTTCATCGGGACCTTCGGCTGCGCTCAAGACACGG
TCTCGGGTCGTCTCTGTGCCGAGCTCATCGTTCGTTCCCTTTCTGCTTCC
GCAAGCGCCAACGTGGGCACTCCTACAGATGTCGACATCGGCTATCACAG
TACCGCATGTAATGCATCTGCCATGCTCGATCCTGCTCGTCCTATCAAGC
CTTCACTACACCACTTTTGCTGTCCATTCATTCGTGGGCTCCAGCTTCGT
TGAAAATTCGTCTGAGAATGAAGCGGTTTTGTCCACGGTACCAGACTTGA
AGTCTTTGTTACCCTCCACCGGCTGTCCCAGAGGTCGAGGTTGCGGCCTA
CGAGGAGGCCTCGATCAATTGGAAACTTCATATTCCTTTTCGACATCTCC
CTCACCAACCTCGTCCATTGCCTATTCAAATTCAAGAGATCTACCCAATA
TCCATGAAGGAAGTAGGGAGCCAGTCATTACCAATTTTGCCCCTTCACGT
GTTAACCTGGTATCCGCGACTCAAAAGACAGAATCTGAAAGCACGGCGAC
TTTATCAGCTGCATTGCCCACAGCAACCACGCTACCTGCCCTCCTTGACC
AGGATTCAGTCGTATCTACTGTCTATAATCAATCTGTGCAGCTCCAAAAG
AAGGGGGCAAAGGGAAAAGACAAAATGTGCGATCCAACTCCAGTGGACCG
GCGCGTGGATCAGCTGGATTTAGAGGGAGCCTGCGTGGGAAGCTGGGGAG
GTTTTTACGACCGCATCGTTAGCGTGACGTTCAATGCGCGCACGTTGGAA
TCGCAGGCATTGAGAATTAGCTCTTTTTGTGCCTCTCCCTGCGGTCCTTT
GTTTGATAGGCAGGTGCGGGAATTTCGGAACGCATGTCAAGAGGGTTTGA
TGAGGATGGAAGAGCAGGAGGATGAAGAGGAGGAGGAAGAGGAGGAGGAG
ATGGAAGCAGGTGAAGGGGAGGAAGGAACATGGATTCCTGTGCCATCAGA
GGAGCTGCTGATCTATCGAATGACAGGCGTGGCCTGGACCAAGATCGGCA
ACGGGAAGCATCGGAAAGCCGACCGCGAGAGGGAGGCAGCCGCCACCGCA
CAGGCCCTGGCTAAAAAGGAAAAGTGCGCGTACTACACCTCCTGTTGTTT
CGGCGAGATGATGAAGACGCTGCGACTCGGGGAGCAGGCGGAGTTGGTGG
AGGGCTTGGAGAGGGTGTGCCCGGGTGCGAGGGAGGCAGCGAATGCCTCG
TGCAGCAGGAGTGCAGCCTCGGGGTAGGTTTCATCGGGACCTTCGGCTGC
GCTCAAGACACGGTCTCGGGTCGTCTCTGTGCCGAGCTCATCGTTCGTTC
CCTTTCTGCTTCCGCAAGCGCCAACGTGGGCACTCCTACAGATGTCGACA
TCGGCTATCACAGTACCGCATGTAATGCATCTGCCATGCTCGATCCTGCT
CGTCCTATCAAGCCTTCACTACACCACTTTTGCTGTCCATTCATTCGTGG
GCTCCAGCTTCGTTGAAAATTCGTCTGAGAATGAAGCGGTTTTGTCCACG
GTACCAGACTTGAAGTCTTTGTTACCCTCCACCGGCTGTCCCAGAGGTCG
AGGTTGCGGCCTACGAGGAGGCCTCGATCAATTGGAAACTTCATATTCCT
TTTCGACATCTCCCTCACCAACCTCGTCCATTGCCTATTCAAATTCAAGA
GATCTACCCAATATCCATGAAGGAAGTAGGGAGCCAGTCATTACCAATTT
TGCCCCTTCACGTGTTAACCTGGTATCCGCGACTCAAAAGACAGAATCTG
AAAGCACGGCGACTTTATCAGCTGCATTGCCCACAGCAACCACGCTACCT
GCCCTCCTTGACCAGGATTCAGTCGTATCTACTGTCTATAATCAATCTGT
GCAGCTCCAAAAGAAGGGGGCAAAGGGAAAAGACAAAATGTGCGATCCAA
CTCCAGTGGACCGGCGCGTGGATCAGCTGGATTTAGAGGGAGCCTGCGTG
GGAAGCTGGGGAGGTTTTTACGACCGCATCGTTAGCGTGACGTTCAATGC
GCGCACGTTGGAATCGCAGGCATTGAGAATTAGCTCTTTTTGTGCCTCTC
CCTGCGGTCCTTTGTTTGATAGGCAGGTGCGGGAATTTCGGAACGCATGT
CAAGAGGGTTTGATGAGGATGGAAGAGCAGGAGGATGAAGAGGAGGAGGA
AGAGGAGGAGGAGATGGAAGCAGGTGAAGGGGAGGAAGGAACATGGATTC
CTGTGCCATCAGAGGAGCTGCTGATCTATCGAATGACAG back to top
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