EWM26447.1, cds4225 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26447.1 vs. NCBI_GenBank
Match: gi|585108494|gb|EWM26447.1| (hypothetical protein Naga_100144g4 [Nannochloropsis gaditana]) HSP 1 Score: 863.603 bits (2230), Expect = 0.000e+0 Identity = 420/420 (100.00%), Postives = 420/420 (100.00%), Query Frame = 0
Query: 1 MSTSAITVPHVMHLPCSILLVLSSLHYTTFAVHSFVGSSFVENSSENEAVLSTVPDLKSLLPSTGCPRGRGCGLRGGLDQLETSYSFSTSPSPTSSIAYSNSRDLPNIHEGSREPVITNFAPSRVNLVSATQKTESESTATLSAALPTATTLPALLDQDSVVSTVYNQSVQLQKKGAKGKDKMCDPTPVDRRVDQLDLEGACVGSWGGFYDRIVSVTFNARTLESQALRISSFCASPCGPLFDRQVREFRNACQEGLMRMEEQEDEEEEEEEEEMEAGEGEEGTWIPVPSEELLIYRMTGFIGTFGCAQDTVSGRLCAELIVRSLSASASANVGTPTGVAWTKIGNGKHRKADREREAAATAQALAKKEKCAYYTSCCFGEMMKTLRLGEQAELVEGLERVCPGAREAANASCSRSAASG 420
MSTSAITVPHVMHLPCSILLVLSSLHYTTFAVHSFVGSSFVENSSENEAVLSTVPDLKSLLPSTGCPRGRGCGLRGGLDQLETSYSFSTSPSPTSSIAYSNSRDLPNIHEGSREPVITNFAPSRVNLVSATQKTESESTATLSAALPTATTLPALLDQDSVVSTVYNQSVQLQKKGAKGKDKMCDPTPVDRRVDQLDLEGACVGSWGGFYDRIVSVTFNARTLESQALRISSFCASPCGPLFDRQVREFRNACQEGLMRMEEQEDEEEEEEEEEMEAGEGEEGTWIPVPSEELLIYRMTGFIGTFGCAQDTVSGRLCAELIVRSLSASASANVGTPTGVAWTKIGNGKHRKADREREAAATAQALAKKEKCAYYTSCCFGEMMKTLRLGEQAELVEGLERVCPGAREAANASCSRSAASG
Sbjct: 1 MSTSAITVPHVMHLPCSILLVLSSLHYTTFAVHSFVGSSFVENSSENEAVLSTVPDLKSLLPSTGCPRGRGCGLRGGLDQLETSYSFSTSPSPTSSIAYSNSRDLPNIHEGSREPVITNFAPSRVNLVSATQKTESESTATLSAALPTATTLPALLDQDSVVSTVYNQSVQLQKKGAKGKDKMCDPTPVDRRVDQLDLEGACVGSWGGFYDRIVSVTFNARTLESQALRISSFCASPCGPLFDRQVREFRNACQEGLMRMEEQEDEEEEEEEEEMEAGEGEEGTWIPVPSEELLIYRMTGFIGTFGCAQDTVSGRLCAELIVRSLSASASANVGTPTGVAWTKIGNGKHRKADREREAAATAQALAKKEKCAYYTSCCFGEMMKTLRLGEQAELVEGLERVCPGAREAANASCSRSAASG 420
BLAST of EWM26447.1 vs. NCBI_GenBank
Match: gi|553188284|ref|XP_005854768.1| (hypothetical protein NGA_0115702 [Nannochloropsis gaditana CCMP526] >gi|553191623|ref|XP_005855416.1| hypothetical protein NGA_0115701 [Nannochloropsis gaditana CCMP526] >gi|422293647|gb|EKU20947.1| hypothetical protein NGA_0115701 [Nannochloropsis gaditana CCMP526] >gi|422294295|gb|EKU21595.1| hypothetical protein NGA_0115702 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 819.305 bits (2115), Expect = 0.000e+0 Identity = 399/409 (97.56%), Postives = 403/409 (98.53%), Query Frame = 0
Query: 12 MHLPCSILLVLSSLHYTTFAVHSFVGSSFVENSSENEAVLSTVPDLKSLLPSTGCPRGRGCGLRGGLDQLETSYSFSTSPSPTSSIAYSNSRDLPNIHEGSREPVITNFAPSRVNLVSATQKTESESTATLSAALPTATTLPALLDQDSVVSTVYNQSVQLQKKGAKGKDKMCDPTPVDRRVDQLDLEGACVGSWGGFYDRIVSVTFNARTLESQALRISSFCASPCGPLFDRQVREFRNACQEGLMRMEEQEDEEEEEEEEEMEAGEGEEGTWIPVPSEELLIYRMTGFIGTFGCAQDTVSGRLCAELIVRSLSASASANVGTPTGVAWTKIGNGKHRKADREREAAATAQALAKKEKCAYYTSCCFGEMMKTLRLGEQAELVEGLERVCPGAREAANASCSRSAASG 420
MHLPC+ILLVLSSLHYTTFAVHSFVG+SFVENSSENEAVLSTVP LKSLL STGCPRGRGCGLRGGLDQLETSYSFSTSPSPTSSIAYSNSRDLPNIHEG REPVITN APSRVNLVSATQKTESESTATLSAALPTATTLPALLDQD VVSTV+NQSVQLQKKGAK KDKMCDPTPVDRRVDQLDLEGACVGSWGGFYDRIVSVTFNARTLESQALRISSFC+SPCGPLFDRQVREFRNACQEGLMRMEEQEDEEEEEEEEEMEAGEGEEGTWIPVPSEELLIYRMTGFIGTFGCAQDTVSGRLCAELIVRSLSASASANVGTPTGVAWTKIGNGKHRKADREREAAATAQALAKKEKCAYYTSCCFGEMMKTLRLGEQAELVEGLERVCPGAREAANASCSRSAASG
Sbjct: 1 MHLPCAILLVLSSLHYTTFAVHSFVGASFVENSSENEAVLSTVPALKSLLSSTGCPRGRGCGLRGGLDQLETSYSFSTSPSPTSSIAYSNSRDLPNIHEGRREPVITNSAPSRVNLVSATQKTESESTATLSAALPTATTLPALLDQDLVVSTVFNQSVQLQKKGAKRKDKMCDPTPVDRRVDQLDLEGACVGSWGGFYDRIVSVTFNARTLESQALRISSFCSSPCGPLFDRQVREFRNACQEGLMRMEEQEDEEEEEEEEEMEAGEGEEGTWIPVPSEELLIYRMTGFIGTFGCAQDTVSGRLCAELIVRSLSASASANVGTPTGVAWTKIGNGKHRKADREREAAATAQALAKKEKCAYYTSCCFGEMMKTLRLGEQAELVEGLERVCPGAREAANASCSRSAASG 409
BLAST of EWM26447.1 vs. NCBI_GenBank
Match: gi|585107376|gb|EWM25587.1| (hypothetical protein Naga_100377g3 [Nannochloropsis gaditana] >gi|585107377|gb|EWM25588.1| hypothetical protein Naga_100377g3 [Nannochloropsis gaditana]) HSP 1 Score: 87.8113 bits (216), Expect = 1.891e-16 Identity = 60/235 (25.53%), Postives = 97/235 (41.28%), Query Frame = 0
Query: 187 TPVDRRVDQLDLEGACVGSWGGFYDRIVSVTFNARTLESQALRISSFCASPCGPLFDRQVREFRNACQEGLMRMEEQEDEEEEEEEEEMEAGEGEEGTWIPV-------PSEELLIYRMTGFIGTFGCAQDTVSGRLCAELIVRSLSASASANVGTPTGVAWTKIGNGKHRKADREREAAATAQALAKKEKCAYYTSCCFGEMMKTLRLGEQAELVEGLERVCPGAREAANASCS 414
T +D +D L + C W F D I + FN L Q + +FCA+PCGP FD+ V E+RN C + ++ T+ P+ +E + GF+ FGC++ + G+ CA+L++ ++A + D E KC YY+SCCFGE+ + +++ + L+ CPGAR A + C+
Sbjct: 41 TELDASLDALAEDAKCGAVWTTFSDTISTAEFNLMPLAGQVKALEAFCATPCGPSFDKAVTEWRNWC-------------------------DSKKATFTPMDDVDEDEDEDEDMPVTFDGFVAEFGCSK-SAGGQFCAQLVMAEIAA----------------------KPDDLE-------------TKCDYYSSCCFGELNRIVKVTDLESRASALDAKCPGARAALESKCA 214 The following BLAST results are available for this feature:
BLAST of EWM26447.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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