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Properties
| Property Name | Value |
|---|
| Product | dihydroorotate dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100144g11.5967.mrna |
| Orig protein id | gnl|cribi|Naga_100144g11.5967 |
| Gene | DHOD |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002463.1 | supercontig | CM002463.1:19597..21986 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4228 ID=rna4228|Name=rna4228|organism=Nannochloropsis gaditana|type=mRNA|length=1808bp
TCCCTGGCACTCCTTCGCTAGTACAGCCTCCTCGCATTTCCAAACATTAC
GACATGAAACAGAAGATAATTCATTCCACCTTAGTATACATCGAAAAGGG
ATGTTCTTGCAGCATGATTATCGGAGATGGAAAGTGGTGCTTCTAAAATT
CATCGGTCTAGTGCAATTCGTTAGATCGCGACAACTCCTGCGAACTAATG
ACACTGCTACTCCGCGTATCAACAATAGCTTTATCGTCACTCACAGCAAA
GAACGAAAATTTTCAGATTCCCCACATGTTCTTCATATTTCGAGCGTCGC
TGGACCAGGACCAGAAAACAGGCTTCTTGGCGTACCATTGGGTGGTGAGA
GTATCTCATTCTTCCCTCTCGTACAAATCGTCCTTGATCCACGAAGGGTG
CAAGATCGATCTCCCAGCAGACACAAGCTATTCCCTTCTTGTGGATTCGC
AGAGCCTATTATTGATGCCCCAGGGTATTGCCCTCTGGTGCGCATACTTG
AGAGAGGCGCAGATATGAATTACGACTCTATCCTTCGAGGTTTTACCACC
GTCAAGAATATGTACGAGACAGAGAAGGAACCTGCGCAAGACGATGAAAG
CTCGCTGCCTGTACGCATGGCCGACATCGGGCACCCACTTCCTTTCCAAA
TAGAAGACCAGGCACTTATCGAGAAGGAGCGCCAGACCGCATATTGGTAC
TACCGAAACATCCTGAACCTCTATACATACGTCAAGCGCTGCGTCCAGGC
AGGGACCGCCACAGCCAAGCCCCCACCGTACGTCCCCCGGGGTTATCATT
CGCAACGTTTGATCTTTACATCTAGCAACGGAACAAAAGATCCACCCATT
GGCCAGAGCTTCGTAAAGGGCACGCACATAGTGGTAGTTATGCGAGGTAC
CATTTTTAAGACAAACCTCGTGCAGGACGAGACTTTCGAGTACGCAAATC
CATCCGACCCTGGCGTCACATCCTCCGGTTTGAATGGACGCTTGCATAAA
GGCTTCTTCTCGGAGGCCCTGACGCTGACCCAGCAGATAGAAATGGGACT
CGATGCTCACCCCACTGTCGACTTACTCTCCTTCGCTGGTCACTCCCTCG
GCGCAGCTTACATACAACTCGTAAGCCCCATCCTAGCCCTCCGTCGACCC
GACCTGGCGGTAGAGGTCTGGAACTTTGGCGCACCGCCCGCAGGAGACAC
CGGATTCGTAGAGCAATTCAACGCCTTGCTCAATCTTCGTGCCCGCAGTT
TCATGTACATTGGGAACGGGCTGGTCACGTCTGCCCCCGTCCCCTTTGGC
ATCGGCGACATCATTCCTCAGGCTTTGAGTCTTTGTTGGCCCGTGCGAGG
TTGTCCAGGAACACAGAATCCGGACATGAATGCGGCGATCAAATACGAGG
CGACGGGCGGCATCGTGGCCTTCTACTCGACAGACATGCCCAACACGCAG
GAATGGAATCGAGTGGACCAAGTCGTCACCCTCGACTCCTCCCCCTCCGC
CTGCCACGGCTGCTCCTATCTCTGCTGGTCTGTACAGGGACTAGACGATC
CGGAGGACCGATGTTACTTTGCGGAACATCCCTGGCCTTGTCCCTACACA
GCATGGGACGGCAAATAGAGCCAATAAAGCTCTTGCAAGATCGTAATAAA
AACAAGATATAAAATATGCCGAGGAAATGGAAAAAAGAATCAAATCACTG
CGCTCCACGACTGCACGCTCATAATACGAGGAAAAATGCAAATCATGTAG
CCTTTAAATGCGATGAAACATCAGTACATAAGAGAAAGACTCCCAATCAA
TCTGGTTG back to topprotein sequence of rna4228 >rna4228-protein ID=rna4228-protein|Name=rna4228|organism=Nannochloropsis gaditana|type=polypeptide|length=537bp
MVRFAPAACRAPWHNHNAARHLYNRLLSSSPSLQREAGPRPHLRKRQTTL
SSIQLPRFYLSSRFSSASSIPPPNPHPPPASFPNLFSTAAAVLGTLTAVD
LLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANH
TGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFV
EVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWE
GRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYAD
YLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRG
RRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRH
AGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKI
QAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRR
RQEEPHILTVDLVEKGTERVGKKDTGRGLWWGWWRQS back to topmRNA from alignment at CM002463.1:19597..21986- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4228 ID=rna4228|Name=rna4228|organism=Nannochloropsis gaditana|type=mRNA|length=2390bp|location=Sequence derived from alignment at CM002463.1:19597..21986- (Nannochloropsis gaditana)
GACACAATGAACGATTGAGGAGAAGCGTCCTTTAACAACGGCATTCCATC
TCTGATTCATGTACACCCAACGTAGTACAGGGCCCACGATAGGAAGTTGG
TGGCTCTCGCGCCCTAGGACGTGGCTGCTTTTCGTTGCTTAAACTAAAAT
CACTCTCACAACCAGAGCGTCAACCATGGTCCGCTTCGCTCCTGCAGCGT
GCCGCGCACCCTGGCATAATCACAATGCGGCCCGGCATCTTTATAACCGT
CTTCTGTCGTCCTCTCCATCATTGCAGTACGTTGGCACGTTTTTGGGTCC
CGTCTGCTCTTGCGTATACCCCTTTTGTGCCGGAACGGGGAAGAAACAGA
ACCTTCTCATAATTCCATGTTCAACTGACGCCATCCTACAGGCGCGAGGC
AGGACCTAGGCCGCATCTCCGCAAACGCCAAACAACCCTCTCGTCGATTC
AATTGCCTCGCTTTTACCTCTCTTCCCGCTTCTCGTCCGCCTCCAGTATC
CCTCCACCCAACCCCCACCCTCCTCCTGCCTCATTTCCTAACTTGTTCTC
AACCGCTGCGGCCGTTCTTGGGACTCTGACGGCTGTTGATCTGCTCGGAA
ATGATGGCCGTATTACCATCCCGACGCTCTACTGGCTCATGGACCATCCA
GGCATGGTACTGTTGCGCTCGCTCGATCCTGAGACCGCCCACGACTGGGC
GATATGGGCCCTCAGCAAAGAATTGGTACCTGCCAACCACACCGGCCAGG
AAGATCGAAGCCCACCCTCGCTGGAGGTCTCCCTGTGGGACGATGTGTGC
GTATTTCCGAATCCGGTGGGCGTGGCGGCAGGCTTCGACAAGCACGCGCA
GGCTGTGAAGGGGCTGCTGGGGCTGGGCCTGGGATTTGTCGAGGTAGGAA
GCGTGACCCCAAGGCCTCAAGACGGGAACCCCAAGCCACGGATGTTTCGT
TTGGAAGAGGATCGGGCCGTGATCAACCGGTACGGGTTCAACTCGCACGG
CGTGGCCGCGGTCAAGCGGCGGCTGCAGGACTACTGGGAAGGGCGGCTCC
GGGCCGACGAGGAGGGCAGGGAGAAGACTGACGAGGGGAGGAGGGGCCTG
GTGGGTGTGAACGTGGGCAAGAACAAGACAACCGAAAGGGCGGAGGAGGA
CTACGTTCTTGGAGTGCGAGAGCTGGCTCCGTACGCGGACTACCTGGTGG
TCAACGTCTCGAGCCCCAACACCCCGGGGCTGCGATCCCTGCAACGGAAG
GGCGCCTTCCAGTCTCTGATCCAAGCCGTGCAACGGGAGCTGAAGGGTCC
AAGCGGCCACGCGAGAGGATTCGCGACGAATGTGCGCGGTCGGCGGGTGC
CTCTGCTCATCAAGGTGGCTCCGGATTTGACGGAGGAGGAGAAGAAGGAC
ATCGCTGCCGTGGCCCTCGAGACTGGCATCGACGGCTTGATTGTCAGCAA
CACAACGGTCACTCGGCCACCAACCCTCCGCTCGCGGCACGCGGGAGAAA
CAGGCGGGTTGAGCGGCTCGCCACTCAAGGAGCTGGCGACACAGACCGTC
CACGACTTTTACCGTCTGACGGGATACGGTCAATTGCCGATCATTGGGGT
GGGAGGCATCGGCTCGGGACAGGATGCCTACGATAAAATACAGGCGGGGG
CGTCGCTGGTGCAAGTACGAAAGATCCTGGATAAAGGGGAGGGAGCAGCG
GGCAATGCGCGCGAAGCCTCTGTCTTGCGCCGTGTGATACCAGCTTTCAG
TGTTTGACATCCCTCTCTATCCCTTTCGTTCGCTTCTAATTCATGGCCGC
ACAGGTCTACAGTATGCTTGTCTACGAAGGGCCTGGGGCGGTCAAACGCA
TCAATCGCGAGCTAGCTACCTTGTTAGAGAGGGACGGCTACACAAGGATC
AGTGATGCCGTAGGGGCGGCGCATCGAAGGAGGCAAGAGGAGCCGCATAT
CTTAACCGTTGATCTGGTTGAGAAGGGGACCGAAAGGGTTGGGAAGAAAG
ACACGGGAAGGGGACTTTGGTGGGGTTGGTGGCGACAATCCTAAACAGAA
TGCGAAGCAGTTGCTGGCACAATATGCACTGTGCGATCCCAGCTTACAAG
CGAATTGCAGGGTTGACAAACAACCAGATTGATTGGGAGTCTTTCTCTTA
TGTACTGATGTTTCATCGCATTTAAAGGCTACATGATTTGCATTTTTCCT
CGTATTATGAGCGTGCAGTCGTGGAGCGCAGTGATTTGATTCTTTTTTCC
ATTTCCTCGGCATATTTTATATCTTGTTTTTATTACGATCTTGCAAGAGC
TTTATTGGCTCTATTTGCCGTCCCATGCTGTGTAGGGACAAGGCCAGGGA
TGTTCCGCAAAGTAACATCGGTCCTCCGGATCGTCTAGTC back to topCoding sequence (CDS) from alignment at CM002463.1:19597..21986- >rna4228 ID=rna4228|Name=rna4228|organism=Nannochloropsis gaditana|type=CDS|length=4842bp|location=Sequence derived from alignment at CM002463.1:19597..21986- (Nannochloropsis gaditana)
GTCTACAGTATGCTTGTCTACGAAGGGCCTGGGGCGGTCAAACGCATCAA
TCGCGAGCTAGCTACCTTGTTAGAGAGGGACGGCTACACAAGGATCAGTG
ATGCCGTAGGGGCGGCGCATCGAAGGAGGCAAGAGGAGCCGCATATCTTA
ACCGTTGATCTGGTTGAGAAGGGGACCGAAAGGGTTGGGAAGAAAGACAC
GGGAAGGGGACTTTGGTGGGGTTGGTGGCGACAATCCTAAGCGCGAGGCA
GGACCTAGGCCGCATCTCCGCAAACGCCAAACAACCCTCTCGTCGATTCA
ATTGCCTCGCTTTTACCTCTCTTCCCGCTTCTCGTCCGCCTCCAGTATCC
CTCCACCCAACCCCCACCCTCCTCCTGCCTCATTTCCTAACTTGTTCTCA
ACCGCTGCGGCCGTTCTTGGGACTCTGACGGCTGTTGATCTGCTCGGAAA
TGATGGCCGTATTACCATCCCGACGCTCTACTGGCTCATGGACCATCCAG
GCATGGTACTGTTGCGCTCGCTCGATCCTGAGACCGCCCACGACTGGGCG
ATATGGGCCCTCAGCAAAGAATTGGTACCTGCCAACCACACCGGCCAGGA
AGATCGAAGCCCACCCTCGCTGGAGGTCTCCCTGTGGGACGATGTGTGCG
TATTTCCGAATCCGGTGGGCGTGGCGGCAGGCTTCGACAAGCACGCGCAG
GCTGTGAAGGGGCTGCTGGGGCTGGGCCTGGGATTTGTCGAGGTAGGAAG
CGTGACCCCAAGGCCTCAAGACGGGAACCCCAAGCCACGGATGTTTCGTT
TGGAAGAGGATCGGGCCGTGATCAACCGGTACGGGTTCAACTCGCACGGC
GTGGCCGCGGTCAAGCGGCGGCTGCAGGACTACTGGGAAGGGCGGCTCCG
GGCCGACGAGGAGGGCAGGGAGAAGACTGACGAGGGGAGGAGGGGCCTGG
TGGGTGTGAACGTGGGCAAGAACAAGACAACCGAAAGGGCGGAGGAGGAC
TACGTTCTTGGAGTGCGAGAGCTGGCTCCGTACGCGGACTACCTGGTGGT
CAACGTCTCGAGCCCCAACACCCCGGGGCTGCGATCCCTGCAACGGAAGG
GCGCCTTCCAGTCTCTGATCCAAGCCGTGCAACGGGAGCTGAAGGGTCCA
AGCGGCCACGCGAGAGGATTCGCGACGAATGTGCGCGGTCGGCGGGTGCC
TCTGCTCATCAAGGTGGCTCCGGATTTGACGGAGGAGGAGAAGAAGGACA
TCGCTGCCGTGGCCCTCGAGACTGGCATCGACGGCTTGATTGTCAGCAAC
ACAACGGTCACTCGGCCACCAACCCTCCGCTCGCGGCACGCGGGAGAAAC
AGGCGGGTTGAGCGGCTCGCCACTCAAGGAGCTGGCGACACAGACCGTCC
ACGACTTTTACCGTCTGACGGGATACGGTCAATTGCCGATCATTGGGGTG
GGAGGCATCGGCTCGGGACAGGATGCCTACGATAAAATACAGGCGGGGGC
GTCGCTGGTGCAAATGGTCCGCTTCGCTCCTGCAGCGTGCCGCGCACCCT
GGCATAATCACAATGCGGCCCGGCATCTTTATAACCGTCTTCTGTCGTCC
TCTCCATCATTGCAGTCTACAGTATGCTTGTCTACGAAGGGCCTGGGGCG
GTCAAACGCATCAATCGCGAGCTAGCTACCTTGTTAGAGAGGGACGGCTA
CACAAGGATCAGTGATGCCGTAGGGGCGGCGCATCGAAGGAGGCAAGAGG
AGCCGCATATCTTAACCGTTGATCTGGTTGAGAAGGGGACCGAAAGGGTT
GGGAAGAAAGACACGGGAAGGGGACTTTGGTGGGGTTGGTGGCGACAATC
CTAAGCGCGAGGCAGGACCTAGGCCGCATCTCCGCAAACGCCAAACAACC
CTCTCGTCGATTCAATTGCCTCGCTTTTACCTCTCTTCCCGCTTCTCGTC
CGCCTCCAGTATCCCTCCACCCAACCCCCACCCTCCTCCTGCCTCATTTC
CTAACTTGTTCTCAACCGCTGCGGCCGTTCTTGGGACTCTGACGGCTGTT
GATCTGCTCGGAAATGATGGCCGTATTACCATCCCGACGCTCTACTGGCT
CATGGACCATCCAGGCATGGTACTGTTGCGCTCGCTCGATCCTGAGACCG
CCCACGACTGGGCGATATGGGCCCTCAGCAAAGAATTGGTACCTGCCAAC
CACACCGGCCAGGAAGATCGAAGCCCACCCTCGCTGGAGGTCTCCCTGTG
GGACGATGTGTGCGTATTTCCGAATCCGGTGGGCGTGGCGGCAGGCTTCG
ACAAGCACGCGCAGGCTGTGAAGGGGCTGCTGGGGCTGGGCCTGGGATTT
GTCGAGGTAGGAAGCGTGACCCCAAGGCCTCAAGACGGGAACCCCAAGCC
ACGGATGTTTCGTTTGGAAGAGGATCGGGCCGTGATCAACCGGTACGGGT
TCAACTCGCACGGCGTGGCCGCGGTCAAGCGGCGGCTGCAGGACTACTGG
GAAGGGCGGCTCCGGGCCGACGAGGAGGGCAGGGAGAAGACTGACGAGGG
GAGGAGGGGCCTGGTGGGTGTGAACGTGGGCAAGAACAAGACAACCGAAA
GGGCGGAGGAGGACTACGTTCTTGGAGTGCGAGAGCTGGCTCCGTACGCG
GACTACCTGGTGGTCAACGTCTCGAGCCCCAACACCCCGGGGCTGCGATC
CCTGCAACGGAAGGGCGCCTTCCAGTCTCTGATCCAAGCCGTGCAACGGG
AGCTGAAGGGTCCAAGCGGCCACGCGAGAGGATTCGCGACGAATGTGCGC
GGTCGGCGGGTGCCTCTGCTCATCAAGGTGGCTCCGGATTTGACGGAGGA
GGAGAAGAAGGACATCGCTGCCGTGGCCCTCGAGACTGGCATCGACGGCT
TGATTGTCAGCAACACAACGGTCACTCGGCCACCAACCCTCCGCTCGCGG
CACGCGGGAGAAACAGGCGGGTTGAGCGGCTCGCCACTCAAGGAGCTGGC
GACACAGACCGTCCACGACTTTTACCGTCTGACGGGATACGGTCAATTGC
CGATCATTGGGGTGGGAGGCATCGGCTCGGGACAGGATGCCTACGATAAA
ATACAGGCGGGGGCGTCGCTGGTGCAAATGGTCCGCTTCGCTCCTGCAGC
GTGCCGCGCACCCTGGCATAATCACAATGCGGCCCGGCATCTTTATAACC
GTCTTCTGTCGTCCTCTCCATCATTGCAGTCTACAGTATGCTTGTCTACG
AAGGGCCTGGGGCGGTCAAACGCATCAATCGCGAGCTAGCTACCTTGTTA
GAGAGGGACGGCTACACAAGGATCAGTGATGCCGTAGGGGCGGCGCATCG
AAGGAGGCAAGAGGAGCCGCATATCTTAACCGTTGATCTGGTTGAGAAGG
GGACCGAAAGGGTTGGGAAGAAAGACACGGGAAGGGGACTTTGGTGGGGT
TGGTGGCGACAATCCTAAGCGCGAGGCAGGACCTAGGCCGCATCTCCGCA
AACGCCAAACAACCCTCTCGTCGATTCAATTGCCTCGCTTTTACCTCTCT
TCCCGCTTCTCGTCCGCCTCCAGTATCCCTCCACCCAACCCCCACCCTCC
TCCTGCCTCATTTCCTAACTTGTTCTCAACCGCTGCGGCCGTTCTTGGGA
CTCTGACGGCTGTTGATCTGCTCGGAAATGATGGCCGTATTACCATCCCG
ACGCTCTACTGGCTCATGGACCATCCAGGCATGGTACTGTTGCGCTCGCT
CGATCCTGAGACCGCCCACGACTGGGCGATATGGGCCCTCAGCAAAGAAT
TGGTACCTGCCAACCACACCGGCCAGGAAGATCGAAGCCCACCCTCGCTG
GAGGTCTCCCTGTGGGACGATGTGTGCGTATTTCCGAATCCGGTGGGCGT
GGCGGCAGGCTTCGACAAGCACGCGCAGGCTGTGAAGGGGCTGCTGGGGC
TGGGCCTGGGATTTGTCGAGGTAGGAAGCGTGACCCCAAGGCCTCAAGAC
GGGAACCCCAAGCCACGGATGTTTCGTTTGGAAGAGGATCGGGCCGTGAT
CAACCGGTACGGGTTCAACTCGCACGGCGTGGCCGCGGTCAAGCGGCGGC
TGCAGGACTACTGGGAAGGGCGGCTCCGGGCCGACGAGGAGGGCAGGGAG
AAGACTGACGAGGGGAGGAGGGGCCTGGTGGGTGTGAACGTGGGCAAGAA
CAAGACAACCGAAAGGGCGGAGGAGGACTACGTTCTTGGAGTGCGAGAGC
TGGCTCCGTACGCGGACTACCTGGTGGTCAACGTCTCGAGCCCCAACACC
CCGGGGCTGCGATCCCTGCAACGGAAGGGCGCCTTCCAGTCTCTGATCCA
AGCCGTGCAACGGGAGCTGAAGGGTCCAAGCGGCCACGCGAGAGGATTCG
CGACGAATGTGCGCGGTCGGCGGGTGCCTCTGCTCATCAAGGTGGCTCCG
GATTTGACGGAGGAGGAGAAGAAGGACATCGCTGCCGTGGCCCTCGAGAC
TGGCATCGACGGCTTGATTGTCAGCAACACAACGGTCACTCGGCCACCAA
CCCTCCGCTCGCGGCACGCGGGAGAAACAGGCGGGTTGAGCGGCTCGCCA
CTCAAGGAGCTGGCGACACAGACCGTCCACGACTTTTACCGTCTGACGGG
ATACGGTCAATTGCCGATCATTGGGGTGGGAGGCATCGGCTCGGGACAGG
ATGCCTACGATAAAATACAGGCGGGGGCGTCGCTGGTGCAAATGGTCCGC
TTCGCTCCTGCAGCGTGCCGCGCACCCTGGCATAATCACAATGCGGCCCG
GCATCTTTATAACCGTCTTCTGTCGTCCTCTCCATCATTGCA back to top
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