EWM26446.1, cds4218 (CDS) Nannochloropsis gaditana

Overview
NameEWM26446.1
Unique Namecds4218
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002463.1:21711..21811 -
Alignment locationCM002463.1:20323..21595 -
Alignment locationCM002463.1:19943..20182 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26446.1
Productdihydroorotate dehydrogenase
Orig transcript idgnl|cribi|Naga_100144g11.5967.mrna
GeneDHOD
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002463.1supercontigCM002463.1:21711..21811 -
CM002463.1supercontigCM002463.1:20323..21595 -
CM002463.1supercontigCM002463.1:19943..20182 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006207'de novo' pyrimidine nucleobase biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004152dihydroorotate dehydrogenase activity
GO:0016627oxidoreductase activity, acting on the CH-CH group of donors
Vocabulary: INTERPRO
TermDefinition
IPR001295Dihydroorotate_DH_CS
IPR013785Aldolase_TIM
IPR005719Dihydroorotate_DH_2
IPR005720Dihydroorotate_DH
Homology
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|585108493|gb|EWM26446.1| (dihydroorotate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 1093.18 bits (2826), Expect = 0.000e+0
Identity = 537/537 (100.00%), Postives = 537/537 (100.00%), Query Frame = 0
Query:    1 MVRFAPAACRAPWHNHNAARHLYNRLLSSSPSLQREAGPRPHLRKRQTTLSSIQLPRFYLSSRFSSASSIPPPNPHPPPASFPNLFSTAAAVLGTLTAVDLLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRRRQEEPHILTVDLVEKGTERVGKKDTGRGLWWGWWRQS 537
            MVRFAPAACRAPWHNHNAARHLYNRLLSSSPSLQREAGPRPHLRKRQTTLSSIQLPRFYLSSRFSSASSIPPPNPHPPPASFPNLFSTAAAVLGTLTAVDLLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRRRQEEPHILTVDLVEKGTERVGKKDTGRGLWWGWWRQS
Sbjct:    1 MVRFAPAACRAPWHNHNAARHLYNRLLSSSPSLQREAGPRPHLRKRQTTLSSIQLPRFYLSSRFSSASSIPPPNPHPPPASFPNLFSTAAAVLGTLTAVDLLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRRRQEEPHILTVDLVEKGTERVGKKDTGRGLWWGWWRQS 537          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|553180280|ref|XP_005853378.1| (dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|553191626|ref|XP_005855417.1| dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422293648|gb|EKU20948.1| dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526] >gi|422295683|gb|EKU22982.1| dihydroorotate dehydrogenase [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1077 bits (2784), Expect = 0.000e+0
Identity = 535/560 (95.54%), Postives = 535/560 (95.54%), Query Frame = 0
Query:    1 MVRFAPAACRAPWHNHNAARHLYNRLLSSSPSLQREAGPRPHLRKRQTTLSSIQLPRFYLSSRFSSASSIPPPNPHPPPASFPNLFSTAAAVLGTLTAVDLLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQ-----------------------VYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRRRQEEPHILTVDLVEKGTERVGKKDTGRGLWWGWWRQS 537
            MVRFAPAACRAPWHNHNAARHLYNRLLSSSPSLQREAGPRPHLRKRQTTLSSIQLPRFYLSSRFSSASSIPPPNPHPPPASFPNLFSTAAAVLGTLTAVDLLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDD CVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPP LRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQ                       VYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRRRQEEPHILTVDLVEKGTERVGKKDTGRGLWWGWWRQS
Sbjct:    1 MVRFAPAACRAPWHNHNAARHLYNRLLSSSPSLQREAGPRPHLRKRQTTLSSIQLPRFYLSSRFSSASSIPPPNPHPPPASFPNLFSTAAAVLGTLTAVDLLGNDGRITIPTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDACVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPILRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVRKILDKGEGAAGNAREASVLRRVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHRRRQEEPHILTVDLVEKGTERVGKKDTGRGLWWGWWRQS 560          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|1173957059|gb|OQS03681.1| (dihydroorotate dehydrogenase, mitochondrial precursor [Thraustotheca clavata])

HSP 1 Score: 401.364 bits (1030), Expect = 9.142e-133
Identity = 207/389 (53.21%), Postives = 272/389 (69.92%), Query Frame = 0
Query:  111 PTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHR 499
            P L    D   M  +R  DPETAH  A+ A   +L+P +    +    P L+VS+++    F NP+G+AAGFDKHA+A++GLL +G GFVE+GSVTP PQ GNPKPR+FRL EDR VINRYGFNS G  AV+R L  Y    +      R++    R G +G+N+GKNKT+    +DYV GV +L P+ DYLV+N+SSPNTPGLR+LQ K   ++L+ AV              A N   +R+PLL+K+APDLT E++KDIA VAL   IDGLIVSNTT+TRP +L+S H GETGGLSG+P+KE++T+ +H  Y+LT  GQ+P+IGVGG+ +G+DAY+KI+AGA+LVQ+YS LVY+GP AV RI  ELA  L+RDG+  +  AVGAAH+
Sbjct:   47 PLLKKFCDPTLMPFVRLFDPETAHILAVKAAKYDLIPKDKCYDD----PILKVSVFN--MTFENPLGIAAGFDKHAEAMQGLLDMGFGFVEIGSVTPLPQSGNPKPRVFRLTEDRGVINRYGFNSIGADAVQRHLTKYAYWTVE-----RQQRKNIRSGPLGINLGKNKTSPSTIDDYVSGVEKLGPFGDYLVINISSPNTPGLRALQGKQELETLVSAVLE------------ARNKLWKRLPLLVKIAPDLTAEDQKDIADVALSLKIDGLIVSNTTITRPDSLQSSHKGETGGLSGAPVKEISTKVLHSMYKLTK-GQIPLIGVGGVATGEDAYEKIRAGATLVQMYSCLVYDGPMAVPRIKEELAACLKRDGFDSVKAAVGAAHK 411          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|669154070|ref|XP_008612597.1| (dihydroorotate oxidase [Saprolegnia diclina VS20] >gi|530735560|gb|EQC33802.1| dihydroorotate oxidase [Saprolegnia diclina VS20])

HSP 1 Score: 395.971 bits (1016), Expect = 1.228e-130
Identity = 208/387 (53.75%), Postives = 270/387 (69.77%), Query Frame = 0
Query:  113 LYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHR 499
            L  L D   M  +R  DPETAH  A+ A    L+P +    +    PSL+V+ ++    F NP+G+AAGFDKHA+A++GLL +G GFVE+GSVTP  Q GNPKPR+FRL EDR VINRYGFNS G  AV++RLQ Y    L      R +    R G +G+N+GKNKT+     DYV GV +L PY DYLV+N+SSPNTPGLRSLQ K   ++L+ AV              A N   +R+PLL+K+APDLT E++KDIA VAL   IDGLIVSNTT++RP +L S H GETGGLSG+P+K+++T+ +H  Y LT +G++P+IGVGG+ +GQDAY+KI+AGA+LVQ+YS LVY+GP AV RI  ELA  L+RDG+  + DA+GAAH+
Sbjct:   54 LKALCDPVLMPAVRLFDPETAHILAVKAAKYGLIPKDKRHDD----PSLKVTAFN--LTFDNPLGIAAGFDKHAEAMQGLLDMGFGFVEIGSVTPLAQSGNPKPRVFRLTEDRGVINRYGFNSVGADAVQKRLQRYAYWALE-----RPQYASVRAGPLGINLGKNKTSPSTIADYVAGVEKLGPYGDYLVINISSPNTPGLRSLQGKQELEALVAAVLE------------ARNKLWKRLPLLVKIAPDLTPEDQKDIADVALALQIDGLIVSNTTISRPESLTSEHKGETGGLSGAPVKDISTKVLHSMYALT-HGKIPLIGVGGVATGQDAYEKIRAGATLVQMYSCLVYDGPMAVPRIKEELAACLQRDGFASVHDAIGAAHK 416          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|1173933272|gb|OQR85108.1| (dihydroorotate dehydrogenase, mitochondrial precursor [Achlya hypogyna])

HSP 1 Score: 393.66 bits (1010), Expect = 1.433e-129
Identity = 210/395 (53.16%), Postives = 270/395 (68.35%), Query Frame = 0
Query:  111 PTLYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTL------RSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHR 499
            P L  L D   M  +R  DPETAH  A+ A    L+P +    +    P L+VS ++    F NP+G+AAGFDKHA+A++GLL +G GFVE+GSVTP PQ GNPKPR+FRL EDR VINRYGFNS G  AV+RRLQ Y    L      R +    R G +G+N+GKNKT+     DYV GV +L PY DYLV+N+SSPNTPGLRSLQ K   ++L+ AV              A N   +R+PLL+K+APDLT +++KDIA VAL   IDGLIVSNTT+TRP +L      RS H GETGGLSG+P+K+++T+ +H  + LT  GQ+P+IGVGG+ +G+DAY+KI AGA+LVQ+YS LVY+GP AV RI  ELA  L+RDG+  + +A+GAAH+
Sbjct:   52 PLLKTLCDPVLMPAVRLFDPETAHILAVKAAKYGLIPKDKRHDD----PMLKVSAFN--MTFDNPLGIAAGFDKHAEAMQGLLDMGFGFVEIGSVTPEPQSGNPKPRVFRLTEDRGVINRYGFNSVGADAVQRRLQRYAYWTLE-----RPRYASVRTGPLGINLGKNKTSPSTIADYVAGVEKLGPYGDYLVINISSPNTPGLRSLQGKAELEALVSAVLA------------ARNKLWKRLPLLVKIAPDLTLDDQKDIAEVALALQIDGLIVSNTTITRPESLTRKNDERSEHKGETGGLSGAPVKDISTKVLHSMFELTK-GQIPLIGVGGVATGKDAYEKILAGATLVQMYSCLVYDGPMAVPRIKAELAECLKRDGFASVHEAIGAAHK 422          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|45504114|dbj|BAD12565.1| (dihydroorotate dehydrogenase [Euglena gracilis])

HSP 1 Score: 393.275 bits (1009), Expect = 2.244e-129
Identity = 216/397 (54.41%), Postives = 268/397 (67.51%), Query Frame = 0
Query:  111 PTLYW-----LMDHPGMVLLRSLDPETAHDWAIWALSKELVPAN-HTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQA--VQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHR 499
            P L+W     + D+  M L+R L+ E AHD AI A S  LVP + H       P  LE+ +W     F NP+G+AAGFDKH +AV  LLG G GFVE+G+VTP PQ GNP PRMFRLE+DRA+INRYGFNS G+AAV++RL            E R+     R GLVGVNVGKNK  E A  DY  G+REL PYADYLV+NVSSPNTPGLR+LQ++ A   LI+A  V R+        R  A       +PLLIK+APDLT EEK+DIA V +ET IDGLIVSNTTV+RP +L S H G+TGGLSG+PL+E++TQ + D Y LT  G +PI+GVGG+ +G+D  +K++AGASLVQ+YSMLVY+GPGA  R+ + L   L R+ +     AVGA HR
Sbjct:   47 PELFWGSFAVVADNVAMPLVRLLEAEAAHDCAIRAASWGLVPRDVHP-----DPADLEMEVWG--LKFSNPLGLAAGFDKHGEAVDALLGTGFGFVEIGTVTPLPQPGNPSPRMFRLEQDRAIINRYGFNSQGLAAVRKRL------------EARQHRPAPRGGLVGVNVGKNKLQEDAAADYSKGLRELGPYADYLVINVSSPNTPGLRNLQKRSAMADLIKASMVARDEVVRDADGRRAAAGKSAAPLPLLIKIAPDLTAEEKQDIAEVVMETKIDGLIVSNTTVSRPASLLSPHKGQTGGLSGAPLREMSTQAIRDMYALT-RGTVPIVGVGGVATGEDVLEKLKAGASLVQMYSMLVYDGPGAPPRVKKGLLQALRREHFGSARSAVGADHR 423          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|698811176|ref|XP_009838617.1| (dihydroorotate dehydrogenase (fumarate) [Aphanomyces astaci] >gi|574106250|gb|ETV71768.1| dihydroorotate dehydrogenase (fumarate) [Aphanomyces astaci])

HSP 1 Score: 392.889 bits (1008), Expect = 3.306e-129
Identity = 213/391 (54.48%), Postives = 267/391 (68.29%), Query Frame = 0
Query:  113 LYWLMDHPGMVLLRSLDPETAHDWAIWALS-----KELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAH 498
            L   MD   M LLR L PET+H  A+ A       K+ VP +         PSL VSL      F NP+G+AAGFDKHA A++GLL +G GFVE+GSVTP PQDGNPKPR+FRL EDR VINRYGFNS G A V+ RL+ Y    L         + + RRG +GVN+GKNK+++   EDYV GV  L P+ DYLV+N+SSPNTPGLRSLQ K    +L+ AV              A N   +R+PLL+K+APDLT ++ +DIA VAL   IDGLIVSNTT++RP +L S HA ETGGLSG+P+KEL+T  +H  Y+LT  G++P+IGVGG+ +GQDAYDKI+AGASLVQ+YS LV+ GP AV RI  EL   +++DGYT +++AVGAAH
Sbjct:   58 LTTFMDPVLMPLLRLLGPETSHVLAVQAAKYGWSVKDTVPDD---------PSLHVSLLG--LSFDNPIGIAAGFDKHADAMQGLLDMGFGFVEIGSVTPLPQDGNPKPRVFRLVEDRGVINRYGFNSQGHAKVRERLEKYKYWTLST-----TTSKQYRRGPLGVNLGKNKSSDSPIEDYVRGVETLGPFGDYLVINISSPNTPGLRSLQGKKELHALVSAVLD------------ARNKLWKRLPLLVKIAPDLTSDDMRDIAEVALALQIDGLIVSNTTISRPESLLSPHAAETGGLSGAPVKELSTTVLHSMYKLT-EGKIPLIGVGGVATGQDAYDKIRAGASLVQLYSSLVFNGPLAVARIKHELTACIKQDGYTSVAEAVGAAH 419          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|813192686|ref|XP_012208225.1| (dihydroorotate oxidase [Saprolegnia parasitica CBS 223.65] >gi|641526701|gb|KDO21044.1| dihydroorotate oxidase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 391.734 bits (1005), Expect = 6.027e-129
Identity = 206/386 (53.37%), Postives = 267/386 (69.17%), Query Frame = 0
Query:  113 LYWLMDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAH 498
            L  L D   M  +R  DPETAH  A+ A    L+P +    +    PSL+V+ ++    F NP+G+AAGFDKHA+A++GLL +G GFVE+GSVTP  Q GNPKPR+FRL EDR VINRYGFNS G   V++RLQ Y    L      R +    R G +G+N+GKNKT+     DYV GV +L PY DYLV+N+SSPNTPGLRSLQ K   ++L+ AV              A N   +R+PLL+K+APDLT E++KDIA VAL   IDGLIVSNTT++RP +L S H GETGGLSG+P+K+++T+ +H  Y LT  G++P+IGVGG+ +GQDAY+KI+AGA+LVQ+YS LV++GP AV RI  ELA  L+RDG+  + DA+GAAH
Sbjct:   53 LKSLCDPVLMPAVRLFDPETAHILAVKAAKYGLIPKDKRHDD----PSLQVTAFN--LTFDNPLGIAAGFDKHAEAMQGLLDMGFGFVEIGSVTPLAQSGNPKPRVFRLTEDRGVINRYGFNSVGADVVQKRLQRYAYWALE-----RPQYASVRAGPLGINLGKNKTSPSTIADYVAGVEKLGPYGDYLVINISSPNTPGLRSLQGKQELEALVAAVLE------------ARNKLWKRLPLLVKIAPDLTLEDQKDIADVALALQIDGLIVSNTTISRPESLHSEHKGETGGLSGAPVKDISTKVLHSMYALT-QGKIPLIGVGGVATGQDAYEKIRAGATLVQMYSCLVFDGPMAVPRIKEELAACLQRDGFASVHDAIGAAH 414          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|695405780|ref|XP_009523918.1| (hypothetical protein PHYSODRAFT_557375 [Phytophthora sojae] >gi|348681385|gb|EGZ21201.1| hypothetical protein PHYSODRAFT_557375 [Phytophthora sojae])

HSP 1 Score: 387.882 bits (995), Expect = 2.909e-127
Identity = 206/383 (53.79%), Postives = 262/383 (68.41%), Query Frame = 0
Query:  117 MDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHR 499
            +  P M ++R  DPETAH  A+      L P +     +  P  L V        FPNP+G+AAGFDKH +A++G+L +G G VE+GSVTP+PQ GNP+PR+FRL EDR VINRYGFNS G+  V  RL+ Y   R +    G       R G++GVN+GKNK TE A  DYV GV  L  YADYLVVNVSSPNTPGLR+LQ K   Q+L+  V +        AR        RR+PLL+K+APDLTE++K+DIA VALE  +DGL+VSNTT++RP TL+    GETGGLSG P+++L+T+ + D Y+LT  GQ+P+IGVGG+ +GQDAYDKI+AGASLVQ+YS L+YE P AV R  +EL  LL RDGY  ++DAVGAAH+
Sbjct:   67 LAEPMMPVVRLFDPETAHQVAVQCARFGLTPKD----PEADPELLRVQALG--LEFPNPLGIAAGFDKHGEAMEGMLDMGFGCVEIGSVTPKPQPGNPQPRVFRLPEDRGVINRYGFNSKGLEYVGDRLERYVGSRAKRQGNGH------RAGVLGVNLGKNKLTEDAASDYVRGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQNLLVRVLK--------ARDEVAAKEERRIPLLVKIAPDLTEDDKQDIADVALELKLDGLVVSNTTLSRPDTLKGEAKGETGGLSGLPVRDLSTKVLGDMYKLT-KGQIPLIGVGGVSTGQDAYDKIRAGASLVQMYSCLIYESPLAVPRAKKELVALLRRDGYESVADAVGAAHK 428          
BLAST of EWM26446.1 vs. NCBI_GenBank
Match: gi|568059047|gb|ETM55635.1| (dihydroorotate dehydrogenase (fumarate) [Phytophthora parasitica])

HSP 1 Score: 387.111 bits (993), Expect = 5.102e-127
Identity = 204/383 (53.26%), Postives = 261/383 (68.15%), Query Frame = 0
Query:  117 MDHPGMVLLRSLDPETAHDWAIWALSKELVPANHTGQEDRSPPSLEVSLWDDVCVFPNPVGVAAGFDKHAQAVKGLLGLGLGFVEVGSVTPRPQDGNPKPRMFRLEEDRAVINRYGFNSHGVAAVKRRLQDYWEGRLRADEEGREKTDEGRRGLVGVNVGKNKTTERAEEDYVLGVRELAPYADYLVVNVSSPNTPGLRSLQRKGAFQSLIQAVQRELKGPSGHARGFATNVRGRRVPLLIKVAPDLTEEEKKDIAAVALETGIDGLIVSNTTVTRPPTLRSRHAGETGGLSGSPLKELATQTVHDFYRLTGYGQLPIIGVGGIGSGQDAYDKIQAGASLVQVYSMLVYEGPGAVKRINRELATLLERDGYTRISDAVGAAHR 499
            +  P M ++R  +PETAH  A+      L P +     +  P  L V        F NP+G+AAGFDKH +A++G+L +G G VE+GSVTP+PQ GNP PR+FRL EDR VINRYGFNS G+  V  RL+ Y   R +  E G       R G++GVN+GKNK TE A  DYV GV  L  YADYLVVNVSSPNTPGLR+LQ K   Q L++ V +        AR        R +PLL+K+APDLTE++K+DIA VALE  +DGL+VSNTT++RP TL+    GETGGLSG P+++L+T+ + D Y+LT  GQ+P+IGVGG+ +GQDAYDKI+AGASLVQ+YS L+YE P AV R  +ELA LL RDGYT +++AVG AH+
Sbjct:   63 LAEPMMPVVRLFEPETAHKIAVQCARFGLTPKD----PETDPELLHVKALG--LEFTNPLGIAAGFDKHGEAMEGMLDMGFGCVEIGSVTPKPQPGNPTPRVFRLAEDRGVINRYGFNSKGLEYVGARLERYVGSRAKRQENGH------RAGVLGVNLGKNKLTEDAAADYVQGVHALGKYADYLVVNVSSPNTPGLRTLQGKIQLQKLLERVLK--------ARDEVAATEKRNIPLLVKIAPDLTEDDKQDIADVALELKVDGLVVSNTTLSRPDTLKGAAKGETGGLSGLPVRDLSTKVLGDMYKLT-KGQIPLIGVGGVSTGQDAYDKIRAGASLVQMYSCLIYESPLAVPRAKKELAALLSRDGYTSVTEAVGTAHK 424          
The following BLAST results are available for this feature:
BLAST of EWM26446.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108493|gb|EWM26446.1|0.000e+0100.00dihydroorotate dehydrogenase [Nannochloropsis gadi... [more]
gi|553180280|ref|XP_005853378.1|0.000e+095.54dihydroorotate dehydrogenase [Nannochloropsis gadi... [more]
gi|1173957059|gb|OQS03681.1|9.142e-13353.21dihydroorotate dehydrogenase, mitochondrial precur... [more]
gi|669154070|ref|XP_008612597.1|1.228e-13053.75dihydroorotate oxidase [Saprolegnia diclina VS20] ... [more]
gi|1173933272|gb|OQR85108.1|1.433e-12953.16dihydroorotate dehydrogenase, mitochondrial precur... [more]
gi|45504114|dbj|BAD12565.1|2.244e-12954.41dihydroorotate dehydrogenase [Euglena gracilis][more]
gi|698811176|ref|XP_009838617.1|3.306e-12954.48dihydroorotate dehydrogenase (fumarate) [Aphanomyc... [more]
gi|813192686|ref|XP_012208225.1|6.027e-12953.37dihydroorotate oxidase [Saprolegnia parasitica CBS... [more]
gi|695405780|ref|XP_009523918.1|2.909e-12753.79hypothetical protein PHYSODRAFT_557375 [Phytophtho... [more]
gi|568059047|gb|ETM55635.1|5.102e-12753.26dihydroorotate dehydrogenase (fumarate) [Phytophth... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4228rna4228Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications