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Properties
| Property Name | Value |
|---|
| Product | atp-dependent -nad h-hydrate dehydratase |
| Orig transcript id | gnl|cribi|Naga_100045g11.1668.mrna |
| Orig protein id | gnl|cribi|Naga_100045g11.1668 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:1139327..1141450 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4208 ID=rna4208|Name=rna4208|organism=Nannochloropsis gaditana|type=mRNA|length=1978bp
TGTTTGTCGATGAGTAAGCCATGATGTCACTGGTGTCACAGCAGCGTTTC
TTTTTGTACGTCTTCCACACGATTTTGGGTGACGCTGTATCAACTCGACA
TCATGATGTCTTTTTAATGCATTGATATATCTATATGTGCATAAGCATGC
TATGTGTATCTGCAAGATATTTTTACCTTAATAGGAGCACCCCACATCTC
GAAACTAGACCACGGTCATCAAGAAACTTAGAAATATGCTCTTTCATCGC
TCCATGGACGCAATAAGCTCAGTCATCGTCACGTTTCTTCTGTTGACGGC
CAGTCCGTCTTTTTCAAATGCGGATGACACCATGGGAGGGCTTGTCAATA
TGAACCCTCGCCTCCGCGCTACTCGCCAGCTTGCAAAGGCTTCTGGGTCC
TCGAAGGTCTCTACGCCTGCAGACCTGTGTGTTGCATCTCTGGATTGGAC
CTCAGAAGGAGGAGAAATATTGTTGAATGGACAACCTTTTCACCTCAAGG
GCGTGTCCTACTTTGGTTTTGAGACCCCTAATGAAGTGCCTCACGGCCTG
TGGTCTGTGACACGCGATCAGATCTTTGGATTTCTGCGAAATGAGAGCTT
CAACGCCGTGCGACTTCCCTTTTCGACTGCATTGGCCTTGGAACCCAATA
AAAAGGTGAATGCTAATACAATTGAGAAGGAGTTGCATGATTTGACAGCC
CTGGAGTTGATTGGAAACATCATCGATAAAGCAGCCGAATATGGCATTCT
CATCATGCTGGACATGCATCGGTTGAACGAGGATTTCATCCCTGAGCTCT
GGTATGACGACAAATACTCTATGGACGATGTGAAGGAGGCGTGGGACAAT
CTGTTAACAGCTTTTGGGGACCGCTGGAATTTGTTTGCCATTGATTTGAA
GAATGAGCCCCACGGAGTCGCCACATGGGGCAGTGGAAAAGCCACGACGG
ATTGGAACACAGCGGCTGAGGAGTTGGCAACTTACCTCTACAAGAAGCAT
CCGCAGTATAAGGGCCTAGTCTTCGTTGAGGGGACACAACTGGCATCAGC
CAAGCATCATAAGCTCGATAAGAACAACAAGTGGTGGGGAGGAGACCTGG
AGGGGGTGCAGGAGTTTCCTATCGATTTGGGCTCCGACGCGTTGAACAAG
AGGCTTGTCTACTCTCCTCATGTCTACGGCCCTGATGCCTTTGTGCAACC
TTACTTTGAAGCGAAAAATTTTCCTGACAACATGCCTGATATTTGGAAGA
AACAGTGGGCTTTCGTAGAGGAGCAAACCGACCGTGCTGTTGTTGTGGGT
GAATGGGGGGGACGATATGAGAATCAGGATAAAATCTGGCAGGACAGCTT
TGCCAAATTTCTAGTCGATGAGTGCCTCGAGGATACCTTCTATTGGTGTT
TGAACCCTAACAGTGGCGACACAGGTGGCCTCTTAGATTACGACTTTCTG
ACTCCTATGCCCAAGAAATTGGCTTTGCTTGCCAAGGTTCAGCCCCACCC
CACGTTTATTACAGTAAAAGGATCAGACCAGTATTGCATCAGCCCTGGCG
CTTATGCCAATCCCAAATGTGACAAGGGACGGAGGCTTGCAACCAGTAAT
ACAGTGTGAAAAATGTATCATTTTGGGTTTTTAAATAGCAGAGCGACTGA
ACGTTCCTCTGCATTCACACGCGGGAGCACGTGTCCTGAAGTTCCCCCTT
TTTCCCGCGGGATGCGAGTTGAGGAAGAATACTTGATTTTTGGCATAGCC
TAGCTTAGACGACGTGTGCGCCCATACGGCAGTTTGATAGGCTGCCTCTA
TGTGTATGTAGCCTGTTTTGAGTTAGAACGGATTAAAGCGGAGCTCAAAT
TAAAAAAATCTATGAAACTCTGAGTAGAGCGGACACAAGAATGGAGCTGA
TTTTGCGCTTGTTTCTTTAATTCACGGCGCTTGTAGGCTTCTCGATCGCC
AAAGAAAGAATAATTTAGACATGACTCA back to topprotein sequence of rna4208 >rna4208-protein ID=rna4208-protein|Name=rna4208|organism=Nannochloropsis gaditana|type=polypeptide|length=520bp
MRSFLGRFSNIFPHPIRLHHPTASDTHLEPPSKATGVPWLMPPPPFLRPP
TFLPALSHSTKRGVSLRFLPLAITAFTTFFGSMSCKSGSSGRGAALSDGR
GQGVAAASIHNAASYSQSDAGGSSSPIAPGRALCLNHSAGSDIGTIKRLI
PALTHTARKGQMGRVGLLGGSADFTGAPFYAGMAGLKVGGDLCYIFTAEE
ASGPLKAYSPELMVTPVYSAKSLGVGFAGDLEGEEDGSSDAARSAEHKAK
EKQVARMVQRVTPFFPKLHVLVVGPGLGRDPWIMEATRRILVEAKTHALP
LVIDADGLWLVAHSPEILQDYPEGDDGGGVVVTPNLIEFARLQAGLTGAS
VAEATPPAVPFQHTDVIAVAKALGGKAGRVTVCLKGREDIVADRERWLVV
TEEGARRRSGGLGDILAGTTGVLLHWSHLAMQEQAHGGAVKAERSERGSE
GKGAQSGEESTCQIDPRDRVLWACAGASLIARRASRRAFEEHRRSMTAPD
VLAHLGPVLEELSPTDIKEP back to topmRNA from alignment at CM002462.1:1139327..1141450- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4208 ID=rna4208|Name=rna4208|organism=Nannochloropsis gaditana|type=mRNA|length=2124bp|location=Sequence derived from alignment at CM002462.1:1139327..1141450- (Nannochloropsis gaditana)
ATGCGCTCTTTTTTGGGACGCTTTTCTAATATCTTTCCGCACCCTATCCG
ACTCCACCATCCCACAGCGTCTGACACCCACCTGGAACCACCAAGCAAAG
CGACCGGGGTTCCCTGGTTGATGCCACCTCCTCCTTTTCTTCGACCTCCT
ACCTTTTTACCGGCGCTGTCTCATTCCACAAAACGGGGGGTTTCCCTTCG
ATTCTTGCCTCTCGCTATTACAGCCTTTACGACGTTTTTTGGTTCTATGT
CGTGTAAAAGCGGTAGCAGCGGACGTGGCGCTGCATTATCTGATGGGCGG
GGCCAAGGTGTCGCGGCCGCTAGCATTCATAACGCAGCCAGTTATTCTCA
GTCGGATGCCGGTGGAAGCTCCTCTCCTATCGCGCCCGGTAGAGCTTTGT
GCCTCAATCACTCTGCCGGATCTGACATAGGCACTATCAAGCGTTTGATT
CCCGCGCTTACGCACACAGCTCGGAAAGGACAGATGGGGAGGGTTGGGCT
TCTAGGCGGCTCCGCAGACTTTACGGGGGCCCCCTTTTACGCAGGAATGG
CCGGCTTGAAAGTCGGGGGCGATCTCTGCTACATCTTCACGGCGGAAGAA
GCCTCGGGTCCTCTCAAGGCGTACAGTCCAGAGCTCATGGTCACGCCGGT
GTACTCGGCCAAGAGCTTAGGTGTGGGATTCGCAGGGGACCTGGAGGGCG
AGGAGGACGGGTCCTCGGACGCGGCACGCTCAGCCGAACACAAAGCGAAG
GAGAAGCAGGTGGCCCGGATGGTCCAGCGCGTCACCCCCTTTTTCCCCAA
GCTCCACGTGCTGGTGGTGGGGCCGGGGCTGGGACGGGACCCTTGGATCA
TGGAGGCGACGCGGCGCATCCTTGTGGAGGCCAAGACACACGCGCTCCCG
CTGGTGATCGACGCCGACGGGCTCTGGCTGGTGGCGCACTCCCCTGAGAT
CCTGCAAGACTACCCGGAAGGTGATGATGGAGGCGGCGTGGTGGTCACCC
CCAACCTGATCGAGTTCGCGCGCCTCCAGGCCGGACTGACAGGAGCCTCC
GTAGCAGAGGCGACTCCTCCTGCCGTCCCTTTCCAGCATACTGACGTGAT
TGCCGTGGCCAAGGCGTTGGGCGGAAAGGCAGGCAGAGTGACTGTATGTC
TGAAGGGGAGGGAGGACATCGTGGCTGATCGAGAGCGGTGGCTGGTGGTG
ACAGAGGAAGGGGCGCGGAGGCGGTCAGGTGGTTTGGGAGATATCTTAGC
GGGCACGACGGGGGTCCTGCTCCATTGGTCACACCTAGCCATGCAAGAAC
AGGCACATGGAGGAGCTGTGAAAGCAGAGAGGAGCGAGCGGGGAAGCGAG
GGAAAGGGGGCTCAATCAGGGGAAGAGAGCACGTGTCAAATCGACCCACG
GGACAGGGTCCTCTGGGCATGTGCCGGTGCTTCGCTTATTGCGCGGCGGG
CCAGTCGAAGGGCTTTTGAGGAACATCGTCGATCGATGACAGCGCCCGAC
GTCCTAGGTACGTCGATTGGGTGAAAATAGGCTAGAGGGGATTCTCGACA
GTGTTTCCTTTTCTTTCTAACAGACAAAAATACCCCACTTGGAAAACAGC
ACACCTGGGCCCGGTCCTCGAAGAACTCAGTCCAACTGACATCAAGGAGC
CATGAAAGTCCATTTTGAAGACAAAAATAGAAGATAAAAATGAGTATCAC
TAAAGAAAATGGAGCTTTTCAACGGCTATTTGCTCGGATTTAAGGATTCT
CACCACGGTCAACCCATTCACCATTTATGATTTCTTGCAAGTAGCCTTCG
ACGATTGACTCATTCTCAAGCATAGCACATGAAGCATGCCCTGTATTGTT
CGACTTATTGAGGGATAAAACATAGATACTAAACCCTTTTTCTTTTTGTG
ATTTTTTTATGGGGCACGCTGTTGGCGCGCCAACATAGGGAAAACATGAC
ATTTAGGTATATAAGCTCCACTTAAGAGCTTCGATTGAGTCGGTGGTAAT
ACTTAATGGAAGTTCTTAATGGGGAGAGCACAGATAATGCAACATGTGAA
TTTTAAAGTTTCGTAATCGCAGATAAGGTGTGACCTCATAGGTTCATGCC
TCAGCAATCTGATGACTTTCTTTA back to topCoding sequence (CDS) from alignment at CM002462.1:1139327..1141450- >rna4208 ID=rna4208|Name=rna4208|organism=Nannochloropsis gaditana|type=CDS|length=3126bp|location=Sequence derived from alignment at CM002462.1:1139327..1141450- (Nannochloropsis gaditana)
CACACCTGGGCCCGGTCCTCGAAGAACTCAGTCCAACTGACATCAAGGAG
CCATGAATGCGCTCTTTTTTGGGACGCTTTTCTAATATCTTTCCGCACCC
TATCCGACTCCACCATCCCACAGCGTCTGACACCCACCTGGAACCACCAA
GCAAAGCGACCGGGGTTCCCTGGTTGATGCCACCTCCTCCTTTTCTTCGA
CCTCCTACCTTTTTACCGGCGCTGTCTCATTCCACAAAACGGGGGGTTTC
CCTTCGATTCTTGCCTCTCGCTATTACAGCCTTTACGACGTTTTTTGGTT
CTATGTCGTGTAAAAGCGGTAGCAGCGGACGTGGCGCTGCATTATCTGAT
GGGCGGGGCCAAGGTGTCGCGGCCGCTAGCATTCATAACGCAGCCAGTTA
TTCTCAGTCGGATGCCGGTGGAAGCTCCTCTCCTATCGCGCCCGGTAGAG
CTTTGTGCCTCAATCACTCTGCCGGATCTGACATAGGCACTATCAAGCGT
TTGATTCCCGCGCTTACGCACACAGCTCGGAAAGGACAGATGGGGAGGGT
TGGGCTTCTAGGCGGCTCCGCAGACTTTACGGGGGCCCCCTTTTACGCAG
GAATGGCCGGCTTGAAAGTCGGGGGCGATCTCTGCTACATCTTCACGGCG
GAAGAAGCCTCGGGTCCTCTCAAGGCGTACAGTCCAGAGCTCATGGTCAC
GCCGGTGTACTCGGCCAAGAGCTTAGGTGTGGGATTCGCAGGGGACCTGG
AGGGCGAGGAGGACGGGTCCTCGGACGCGGCACGCTCAGCCGAACACAAA
GCGAAGGAGAAGCAGGTGGCCCGGATGGTCCAGCGCGTCACCCCCTTTTT
CCCCAAGCTCCACGTGCTGGTGGTGGGGCCGGGGCTGGGACGGGACCCTT
GGATCATGGAGGCGACGCGGCGCATCCTTGTGGAGGCCAAGACACACGCG
CTCCCGCTGGTGATCGACGCCGACGGGCTCTGGCTGGTGGCGCACTCCCC
TGAGATCCTGCAAGACTACCCGGAAGGTGATGATGGAGGCGGCGTGGTGG
TCACCCCCAACCTGATCGAGTTCGCGCGCCTCCAGGCCGGACTGACAGGA
GCCTCCGTAGCAGAGGCGACTCCTCCTGCCGTCCCTTTCCAGCATACTGA
CGTGATTGCCGTGGCCAAGGCGTTGGGCGGAAAGGCAGGCAGAGTGACTG
TATGTCTGAAGGGGAGGGAGGACATCGTGGCTGATCGAGAGCGGTGGCTG
GTGGTGACAGAGGAAGGGGCGCGGAGGCGGTCAGGTGGTTTGGGAGATAT
CTTAGCGGGCACGACGGGGGTCCTGCTCCATTGGTCACACCTAGCCATGC
AAGAACAGGCACATGGAGGAGCTGTGAAAGCAGAGAGGAGCGAGCGGGGA
AGCGAGGGAAAGGGGGCTCAATCAGGGGAAGAGAGCACGTGTCAAATCGA
CCCACGGGACAGGGTCCTCTGGGCATGTGCCGGTGCTTCGCTTATTGCGC
GGCGGGCCAGTCGAAGGGCTTTTGAGGAACATCGTCGATCGATGACAGCG
CCCGACGTCCTAGCACACCTGGGCCCGGTCCTCGAAGAACTCAGTCCAAC
TGACATCAAGGAGCCATGAATGCGCTCTTTTTTGGGACGCTTTTCTAATA
TCTTTCCGCACCCTATCCGACTCCACCATCCCACAGCGTCTGACACCCAC
CTGGAACCACCAAGCAAAGCGACCGGGGTTCCCTGGTTGATGCCACCTCC
TCCTTTTCTTCGACCTCCTACCTTTTTACCGGCGCTGTCTCATTCCACAA
AACGGGGGGTTTCCCTTCGATTCTTGCCTCTCGCTATTACAGCCTTTACG
ACGTTTTTTGGTTCTATGTCGTGTAAAAGCGGTAGCAGCGGACGTGGCGC
TGCATTATCTGATGGGCGGGGCCAAGGTGTCGCGGCCGCTAGCATTCATA
ACGCAGCCAGTTATTCTCAGTCGGATGCCGGTGGAAGCTCCTCTCCTATC
GCGCCCGGTAGAGCTTTGTGCCTCAATCACTCTGCCGGATCTGACATAGG
CACTATCAAGCGTTTGATTCCCGCGCTTACGCACACAGCTCGGAAAGGAC
AGATGGGGAGGGTTGGGCTTCTAGGCGGCTCCGCAGACTTTACGGGGGCC
CCCTTTTACGCAGGAATGGCCGGCTTGAAAGTCGGGGGCGATCTCTGCTA
CATCTTCACGGCGGAAGAAGCCTCGGGTCCTCTCAAGGCGTACAGTCCAG
AGCTCATGGTCACGCCGGTGTACTCGGCCAAGAGCTTAGGTGTGGGATTC
GCAGGGGACCTGGAGGGCGAGGAGGACGGGTCCTCGGACGCGGCACGCTC
AGCCGAACACAAAGCGAAGGAGAAGCAGGTGGCCCGGATGGTCCAGCGCG
TCACCCCCTTTTTCCCCAAGCTCCACGTGCTGGTGGTGGGGCCGGGGCTG
GGACGGGACCCTTGGATCATGGAGGCGACGCGGCGCATCCTTGTGGAGGC
CAAGACACACGCGCTCCCGCTGGTGATCGACGCCGACGGGCTCTGGCTGG
TGGCGCACTCCCCTGAGATCCTGCAAGACTACCCGGAAGGTGATGATGGA
GGCGGCGTGGTGGTCACCCCCAACCTGATCGAGTTCGCGCGCCTCCAGGC
CGGACTGACAGGAGCCTCCGTAGCAGAGGCGACTCCTCCTGCCGTCCCTT
TCCAGCATACTGACGTGATTGCCGTGGCCAAGGCGTTGGGCGGAAAGGCA
GGCAGAGTGACTGTATGTCTGAAGGGGAGGGAGGACATCGTGGCTGATCG
AGAGCGGTGGCTGGTGGTGACAGAGGAAGGGGCGCGGAGGCGGTCAGGTG
GTTTGGGAGATATCTTAGCGGGCACGACGGGGGTCCTGCTCCATTGGTCA
CACCTAGCCATGCAAGAACAGGCACATGGAGGAGCTGTGAAAGCAGAGAG
GAGCGAGCGGGGAAGCGAGGGAAAGGGGGCTCAATCAGGGGAAGAGAGCA
CGTGTCAAATCGACCCACGGGACAGGGTCCTCTGGGCATGTGCCGGTGCT
TCGCTTATTGCGCGGCGGGCCAGTCGAAGGGCTTTTGAGGAACATCGTCG
ATCGATGACAGCGCCCGACGTCCTAG back to top
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