Naga_100045g11, gene4052 (gene) Nannochloropsis gaditana

Overview
NameNaga_100045g11
Unique Namegene4052
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1139327..1141450 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100045g11
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1139327..1141450 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL142ngnoL142Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G00030NO08G00030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna4208rna4208-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna4208rna4208Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna4208

>rna4208-protein ID=rna4208-protein|Name=rna4208|organism=Nannochloropsis gaditana|type=polypeptide|length=520bp
MRSFLGRFSNIFPHPIRLHHPTASDTHLEPPSKATGVPWLMPPPPFLRPP
TFLPALSHSTKRGVSLRFLPLAITAFTTFFGSMSCKSGSSGRGAALSDGR
GQGVAAASIHNAASYSQSDAGGSSSPIAPGRALCLNHSAGSDIGTIKRLI
PALTHTARKGQMGRVGLLGGSADFTGAPFYAGMAGLKVGGDLCYIFTAEE
ASGPLKAYSPELMVTPVYSAKSLGVGFAGDLEGEEDGSSDAARSAEHKAK
EKQVARMVQRVTPFFPKLHVLVVGPGLGRDPWIMEATRRILVEAKTHALP
LVIDADGLWLVAHSPEILQDYPEGDDGGGVVVTPNLIEFARLQAGLTGAS
VAEATPPAVPFQHTDVIAVAKALGGKAGRVTVCLKGREDIVADRERWLVV
TEEGARRRSGGLGDILAGTTGVLLHWSHLAMQEQAHGGAVKAERSERGSE
GKGAQSGEESTCQIDPRDRVLWACAGASLIARRASRRAFEEHRRSMTAPD
VLAHLGPVLEELSPTDIKEP
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Synonyms
Publications