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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100045g25.1665.mrna |
| Orig protein id | gnl|cribi|Naga_100045g25.1665 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:1086655..1087188 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4196 ID=rna4196|Name=rna4196|organism=Nannochloropsis gaditana|type=mRNA|length=2519bp
CACACACTCGTTCAGCACAACCATCGATGTAATTACATTGCTTACCACAG
GCGCACAGTGAGTCCTTACCCGTGGAATTTTTGGAATTGATCGACGGTTC
CCACATCGAACCTTTTCTCCCCGCAGTCATGGTACTTGACCATCCTATTC
ACCTCGAGGAGGGGGATGACGAAGAAGACATCTTCGTCAGTCCTCAAACG
CTCTCTACCATCAGGCTGGAACTTCGGGCGGCTGTGGCAGATTTAAGTGC
CCGGGGTTTAAAGTTAGCTGCGAAGTGGGCAGCCGAGCAGCTTGCTGGTC
TGCGGCAACCATCCACCAATATGGAACGCCCTGCAGGGATTTTCTCGGGG
CCCCGAGCCTGGGAGGGATGGGTGGAGGAGGAGGCGGGCGAGGACGAAGG
CACTGCCCCTGCGGAGTTTAGCGACGCTTTTCTGGTGGCCAAGGCGTGCT
TTGACACCGGTGAATACAGACGAGCCGCGCATGTTTTGCAAGTGGAGAAG
GAGGAGGCAGGGATAGAAGGAGGGATGGAGGGGGGCGGCGAGGGAGAGGC
CTCGCTCCCTGCTCGGACGATCAATCAGGAGGAATTGTTTCTACGGTCTT
ACGCCTCCTATTTGGCAGGAGAGAAGGCGAAAGAAGAACGCATGATGGAA
ATCACGGACCAGCTTGATCGTTGTCAAGTCCTCAACACCGACCTTCAGCC
GCTGATCGATGAGCTCGCGCCCCTCCACGCTACCAAGTCTCTGGATGGTT
TCAACCTATATATGTACGCGGTCGCCTTGAAAGAGATGGAGCCGTACCTA
GTCCCTCGGAGGAACACAACACCATCCTCGGCCGCTGCAGCCGAGGTGGC
TGAACAGGAGGGGGGAGGGGGCGTGGGAAGCGGAGGGGGCGGGGGAGGGG
AGAGGGAAACGGTCGCCTCGGGGGCCGCAGCACTTAATCGAGAGGGGGTT
TGCGGGGAGGAAGGGCAGATGCGTCGGCCGAGCGCCAAGAGCGTCTTGGT
GGAAGCCGTGCTCGCCTACCCCTACAACTGGAGCGCTTGGTTGGATCTTG
CCGAGGTCCTCTGCGACGAGAAACAGCACCAGCAACGTCCGGAGGAGGGG
GCGGGCAGGGGCAAGTCGGAGGCGCCCCTGCTGGAGGGGAGGAGAGGAGG
GGGGATGGGGGTGCAGGGGGGGCAAAGAGGGGAAAGAGGGGAGGGCTTCT
TCTCGGAGCAAGTACAAGGACGCTTGTCCGCCTTGTGGATGTACGATTTC
TTCCAGGCCCACCTGCTGCTCGAGCAACACCAGAGCGAGCACGCCCTCTT
TCTCCTTCGCCGTCTTCTCCACGTGTTTCCGACCTCCTCTTACCTCAAGG
CCCAATGTGCCATCGCCCGCTACAATCTTCGAGATTTCGAGGAAGCCCAG
GAAGGCTTCCGGGCGCTTCAAGAGCAAGACCCTTACCGACTGGAAAACTT
AGAAAGGTATTCCGACGTCCTCTACGTGAAGGAAAGCCGGGCGGAACTCT
CTCAACTGGCCCATATAGCTGCGCGCAACGACAAATATCGACCTGAGACC
TGTTGCATCATCGGCAACTACTACTCTTTAAAGGGTCAACATGAGCGTGC
TGTCTTATACTTCCAAAGAGCCCTTAGACTGAACCGAAAGTTCCTGTTTG
CCTGGACACTCATGGGCCACGGTTTCCTTGAGATGAAGAACACGGGGGCG
GCTATTGAGGCGTATCGCCGGGCCGTGGACATCAACCCCCGCGATTATCG
GGCGTGGTACGGGCTAGGTCAAACGTACGAGCTCCTGCAAATGTACCTTT
ATGCCATATATTACTACCGAAAAGCGGCGACCCTCCGTCCTTTCGATGCG
CGCATGTGGTGTGCTCTCGGTGTCTGCTACGAACAATTGGACCGACGCAA
CGAAGCCATCAAGTGCTACGAGAGGGCTGTGTGCAACAACGACAGGGAGG
GAATCGCCACAGCCAAGCTCGCCCGCCTCTACCGCGATGATCAAGACGAA
TGGAAGGCCGCTCGCTGCTACCAGCGCCACTTAGAAGCACGCCAAGGGTA
TCAGACGGACGGAAGCACCGATACGGTTGACGCTCTCCTATTCCTCGCGC
ATTATCACAAAAGGAGGCACGACCTCCACACTGCCACGCTTTACTGCAAC
CGCCTGTTGGATATGGGAGGGCGGGAGCAAGAAGAAGCGAAAGCTTTGCT
TCGAGAAATCCGCAGTATGGAAGGTCAAGAGGAGGAAGAAGAAGAGGAAC
GGCGACGGAGCTTCAGTGCATTTCCAGTCTTCGATCATGACGAGAGCGCT
AGTCTTCCTTCCTTCTCCTCGGATTTATCACCAGCAGCCGTTACCTCGCC
GTCTCATAACAGCAGTGGTACTCGGAGAATGACAAGGCAACAAGCAGCAG
CGGCTGCAGCGGCTGCAGCGGAGGCCATGCGTAGTGGAGAAAGAAGACGG
GCGGACGCTTTCGTAGGTGATGCTTATGAAAGAGAAACGAGGCTGAAGGG
GAAAAGGACGATGGTCTGA back to topprotein sequence of rna4196 >rna4196-protein ID=rna4196-protein|Name=rna4196|organism=Nannochloropsis gaditana|type=polypeptide|length=158bp
MDREGWVEGGIAQRANVEGWVNTRRESQHIWKMGEVSHEIDSAKGDGRGN
RKEESERGQCVVVGYRRLNGGSKKVCNARMSSAISQVGKGGNLNILYLRE
SVDRDSARSLKLNPRASTARQDYGKVFPRWKPTRKSSPIGRKQAGRRGFK
RQDSNSSE back to topmRNA from alignment at CM002462.1:1086655..1087188- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4196 ID=rna4196|Name=rna4196|organism=Nannochloropsis gaditana|type=mRNA|length=534bp|location=Sequence derived from alignment at CM002462.1:1086655..1087188- (Nannochloropsis gaditana)
ATGGATAGAGAAGGATGGGTTGAGGGGGGCATTGCGCAAAGGGCTAACGT
AGAGGGCTGGGTGAATACAAGACGAGAGTCGCAGCACATATGGTAGAAAG
TTAAAGACACATCCCCCCCTCCCCCGGTAGAATGGGGACGTGAAGTTAGG
AAAATGGGGGAGGTGAGCCACGAAATCGATTCGGCGAAAGGCGACGGAAG
GGGGAACAGGAAGGAGGAAAGCGAAAGGGGCCAGTGCGTCGTGGTAGGGT
ACAGAAGGTTGAACGGAGGGAGTAAGAAGGTGTGTAATGCCCGCATGTCG
TCAGCGATCTCTCAGGTTGGTAAGGGAGGGAACCTCAATATCCTGTATTT
GCGAGAAAGCGTAGACAGAGATTCCGCTAGGTCGCTTAAGCTCAATCCTC
GAGCAAGCACAGCCAGGCAAGACTACGGGAAGGTTTTCCCACGATGGAAG
CCGACACGGAAGTCAAGCCCTATCGGAAGGAAGCAAGCAGGAAGACGAGG
ATTCAAAAGACAAGATAGCAATTCATCTGAATGA back to topCoding sequence (CDS) from alignment at CM002462.1:1086655..1087188- >rna4196 ID=rna4196|Name=rna4196|organism=Nannochloropsis gaditana|type=CDS|length=954bp|location=Sequence derived from alignment at CM002462.1:1086655..1087188- (Nannochloropsis gaditana)
GAAAATGGGGGAGGTGAGCCACGAAATCGATTCGGCGAAAGGCGACGGAA
GGGGGAACAGGAAGGAGGAAAGCGAAAGGGGCCAGTGCGTCGTGGTAGGG
TACAGAAGGTTGAACGGAGGGAGTAAGAAGGTGTGTAATGCCCGCATGTC
GTCAGCGATCTCTCAGGTTGGTAAGGGAGGGAACCTCAATATCCTGTATT
TGCGAGAAAGCGTAGACAGAGATTCCGCTAGGTCGCTTAAGCTCAATCCT
CGAGCAAGCACAGCCAGGCAAGACTACGGGAAGGTTTTCCCACGATGGAA
GCCGACACGGAAGTCAAGCCCTATCGGAAGGAAGCAAGCAGGAAGACGAG
GATTCAAAAGACAAGATAGCAATTCATCTGAATGAATGGATAGAGAAGGA
TGGGTTGAGGGGGGCATTGCGCAAAGGGCTAACGTAGAGGGCTGGGTGAA
TACAAGACGAGAGTCGCAGCACATATGGAAAATGGGGGAGGTGAGCCACG
AAATCGATTCGGCGAAAGGCGACGGAAGGGGGAACAGGAAGGAGGAAAGC
GAAAGGGGCCAGTGCGTCGTGGTAGGGTACAGAAGGTTGAACGGAGGGAG
TAAGAAGGTGTGTAATGCCCGCATGTCGTCAGCGATCTCTCAGGTTGGTA
AGGGAGGGAACCTCAATATCCTGTATTTGCGAGAAAGCGTAGACAGAGAT
TCCGCTAGGTCGCTTAAGCTCAATCCTCGAGCAAGCACAGCCAGGCAAGA
CTACGGGAAGGTTTTCCCACGATGGAAGCCGACACGGAAGTCAAGCCCTA
TCGGAAGGAAGCAAGCAGGAAGACGAGGATTCAAAAGACAAGATAGCAAT
TCATCTGAATGAATGGATAGAGAAGGATGGGTTGAGGGGGGCATTGCGCA
AAGGGCTAACGTAGAGGGCTGGGTGAATACAAGACGAGAGTCGCAGCACA
TATG back to top
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