EWM26473.1, cds4186 (CDS) Nannochloropsis gaditana

Overview
NameEWM26473.1
Unique Namecds4186
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1087097..1087188 -
Alignment locationCM002462.1:1086655..1087039 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26473.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100045g25.1665.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1087097..1087188 -
CM002462.1supercontigCM002462.1:1086655..1087039 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26473.1 vs. NCBI_GenBank
Match: gi|585108526|gb|EWM26473.1| (hypothetical protein Naga_100045g25 [Nannochloropsis gaditana])

HSP 1 Score: 320.087 bits (819), Expect = 1.159e-110
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 
Query:    1 MDREGWVEGGIAQRANVEGWVNTRRESQHIWKMGEVSHEIDSAKGDGRGNRKEESERGQCVVVGYRRLNGGSKKVCNARMSSAISQVGKGGNLNILYLRESVDRDSARSLKLNPRASTARQDYGKVFPRWKPTRKSSPIGRKQAGRRGFKRQDSNSSE 158
            MDREGWVEGGIAQRANVEGWVNTRRESQHIWKMGEVSHEIDSAKGDGRGNRKEESERGQCVVVGYRRLNGGSKKVCNARMSSAISQVGKGGNLNILYLRESVDRDSARSLKLNPRASTARQDYGKVFPRWKPTRKSSPIGRKQAGRRGFKRQDSNSSE
Sbjct:    1 MDREGWVEGGIAQRANVEGWVNTRRESQHIWKMGEVSHEIDSAKGDGRGNRKEESERGQCVVVGYRRLNGGSKKVCNARMSSAISQVGKGGNLNILYLRESVDRDSARSLKLNPRASTARQDYGKVFPRWKPTRKSSPIGRKQAGRRGFKRQDSNSSE 158
The following BLAST results are available for this feature:
BLAST of EWM26473.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108526|gb|EWM26473.1|1.159e-110100.00hypothetical protein Naga_100045g25 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4196rna4196Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications