rna4184, rna4184 (mRNA) Nannochloropsis gaditana

Overview
Namerna4184
Unique Namerna4184
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1003
Alignment locationCM002462.1:1054502..1055184 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101201g1.3344.mrna
Orig protein idgnl|cribi|Naga_101201g1.3344
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1054502..1055184 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101201g1gene4027Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26498.1cds4174Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4184rna4184-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4184 ID=rna4184|Name=rna4184|organism=Nannochloropsis gaditana|type=mRNA|length=1003bp
TCCTCCAGGCGTGCTCCTCGCCTACCTGGCCTCCCCAACCCTGATCCGCC
TGACGTCCTGGGAGGACCTCTTCCGCATCTACGGTGGCCTGGGTTTGCTC
TGGCTGGCGCTGTGGATCCCTTTCGCAGCTGAGAAGCCTCCCTCCTCCCC
GGCGCCGCTGGTTGGCTTCCCCCCCTCCCTTTCTCCCTCCCCCCCTCCTT
CCCCACTCCTCGATGCCTCCCTCTGTGCTCCGTTCCTGGAGGTTGTCATT
AAACACACGGCATACGCGGCATCGCTAAGATAATGCATGCGACCCTCCCC
CCTCCCTCCCTTCCTCCGGCTTTCCCTCCCTCCCTTTCTCCCCCTTCCCC
CCTCCGGCCCTCAGGAGGGTGTGGAGGAGGTGCCTGGAGCCCTCCGTCAA
GTGTGGGAGAGCCTGGTCAGCGTCCCCTGGAAAGACTTCGTGAGCAGCCC
CGCCCTCTGGGCCGTCACGTTCGCGCACATGGTAGAAAGGAAGGAAGGGA
AGGAGGGAGGGAGGGAGGGAGGGAAGGAATGAGGGAGGGAAGGAGGATAA
GGATACGGAGGTCGAGGTTGGGGGGGGAAGGGCTGGACCGACGGGTCTCG
ATTTCCGCTCACTATCTCGCCATCGTTCCTCTTCCCCTCCCCTTCGTCCT
CCCATTCCACCCCTCACATCCGGACGCTTCCCTACCCATCCTCCAGGCGC
ACAATTACGGCCTGTACGTGCTCCTGGCCTGGCTCCCTACCTATTTTTCT
CAGACCTACGGGCTGGATTTGAAGCAGAGCAGCGTTCTTTCCGTCGCTCC
TTGGATCGCGGCGGCGATCGTCTCGAACTTGGCAGGTTGGGGCGCAGATA
CCTTAATAAACAGCGAGGTGGTGACCAAGACCACAGTCCGGAAGCTCTTC
CAGTGCAGCGCTCTTCTCATCCCTGCCGCCTGCATGACCGCGCTGGTACG
TGGCTCCCCCAACCTCTCCCAGGGCCAACCCCCGTCCCCGAAACGGGACG
GTC
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protein sequence of rna4184

>rna4184-protein ID=rna4184-protein|Name=rna4184|organism=Nannochloropsis gaditana|type=polypeptide|length=215bp
MATMRCKRRRISTICPAAAGATAAAFLIATTRAFVYQPQRLHVTQHVPVR
GSSPDWTAMGRTCVGKNLPSCQSREFPECSLRTRGSTGLTCSSRSGGAAG
IPLRNRAPRCPSPTFASSFSCHDAICKPLLSLSPASFSIVPSSRLYASSL
PSPKTDEEEEPVPPDAWRLLALSFLCMIICSLDRVAMSVAILPMSLEFGF
SGESSEGRRGGREGG
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mRNA from alignment at CM002462.1:1054502..1055184-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4184 ID=rna4184|Name=rna4184|organism=Nannochloropsis gaditana|type=mRNA|length=683bp|location=Sequence derived from alignment at CM002462.1:1054502..1055184- (Nannochloropsis gaditana)
TTTTCACAGAGGGATAGAGCACTTACAAAATAGAAAGGATGGCTACGATG
CGGTGTAAAAGGAGAAGAATATCAACTATCTGTCCTGCAGCAGCAGGAGC
AACAGCAGCTGCATTCCTTATCGCGACAACACGGGCTTTTGTATATCAAC
CCCAGCGGCTTCATGTAACCCAGCATGTTCCTGTAAGAGGCAGCAGCCCC
GACTGGACCGCAATGGGCAGGACATGTGTTGGTAAAAATCTACCCTCTTG
TCAAAGTCGAGAATTTCCCGAATGTAGCTTGCGGACCCGTGGCAGCACGG
GCCTGACATGTTCCAGTCGGTCTGGGGGCGCTGCCGGAATCCCTTTGCGG
AACAGAGCACCTCGATGCCCATCACCGACCTTTGCCAGCTCTTTCTCTTG
CCATGACGCTATCTGCAAGCCCCTCCTTTCACTTTCTCCGGCGTCTTTCT
CCATCGTGCCATCCTCCCGGCTGTACGCCTCGTCTTTGCCTTCCCCCAAG
ACGGACGAGGAGGAGGAGCCCGTTCCCCCCGATGCGTGGAGGCTCTTGGC
GCTTTCCTTCCTGTGCATGATCATCTGTTCTTTGGATCGAGTCGCCATGT
CTGTGGCCATCTTGCCCATGTCCCTAGAATTTGGCTTCAGTGGTGAGAGC
AGCGAGGGGAGGAGGGGAGGGAGAGAGGGAGGA
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Coding sequence (CDS) from alignment at CM002462.1:1054502..1055184-

>rna4184 ID=rna4184|Name=rna4184|organism=Nannochloropsis gaditana|type=CDS|length=645bp|location=Sequence derived from alignment at CM002462.1:1054502..1055184- (Nannochloropsis gaditana)
ATGGCTACGATGCGGTGTAAAAGGAGAAGAATATCAACTATCTGTCCTGC
AGCAGCAGGAGCAACAGCAGCTGCATTCCTTATCGCGACAACACGGGCTT
TTGTATATCAACCCCAGCGGCTTCATGTAACCCAGCATGTTCCTGTAAGA
GGCAGCAGCCCCGACTGGACCGCAATGGGCAGGACATGTGTTGGTAAAAA
TCTACCCTCTTGTCAAAGTCGAGAATTTCCCGAATGTAGCTTGCGGACCC
GTGGCAGCACGGGCCTGACATGTTCCAGTCGGTCTGGGGGCGCTGCCGGA
ATCCCTTTGCGGAACAGAGCACCTCGATGCCCATCACCGACCTTTGCCAG
CTCTTTCTCTTGCCATGACGCTATCTGCAAGCCCCTCCTTTCACTTTCTC
CGGCGTCTTTCTCCATCGTGCCATCCTCCCGGCTGTACGCCTCGTCTTTG
CCTTCCCCCAAGACGGACGAGGAGGAGGAGCCCGTTCCCCCCGATGCGTG
GAGGCTCTTGGCGCTTTCCTTCCTGTGCATGATCATCTGTTCTTTGGATC
GAGTCGCCATGTCTGTGGCCATCTTGCCCATGTCCCTAGAATTTGGCTTC
AGTGGTGAGAGCAGCGAGGGGAGGAGGGGAGGGAGAGAGGGAGGA
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Synonyms
Publications