EWM26498.1, cds4174 (CDS) Nannochloropsis gaditana

Overview
NameEWM26498.1
Unique Namecds4174
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:1054502..1055146 -

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Properties
Property NameValue
Start range1054502
Start range.
Protein idEWM26498.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101201g1.3344.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:1054502..1055146 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
Homology
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BLAST of EWM26498.1 vs. NCBI_GenBank
Match: gi|585108556|gb|EWM26498.1| (hypothetical protein Naga_101201g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 430.254 bits (1105), Expect = 1.915e-152
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 
Query:    1 MATMRCKRRRISTICPAAAGATAAAFLIATTRAFVYQPQRLHVTQHVPVRGSSPDWTAMGRTCVGKNLPSCQSREFPECSLRTRGSTGLTCSSRSGGAAGIPLRNRAPRCPSPTFASSFSCHDAICKPLLSLSPASFSIVPSSRLYASSLPSPKTDEEEEPVPPDAWRLLALSFLCMIICSLDRVAMSVAILPMSLEFGFSGESSEGRRGGREGG 215
            MATMRCKRRRISTICPAAAGATAAAFLIATTRAFVYQPQRLHVTQHVPVRGSSPDWTAMGRTCVGKNLPSCQSREFPECSLRTRGSTGLTCSSRSGGAAGIPLRNRAPRCPSPTFASSFSCHDAICKPLLSLSPASFSIVPSSRLYASSLPSPKTDEEEEPVPPDAWRLLALSFLCMIICSLDRVAMSVAILPMSLEFGFSGESSEGRRGGREGG
Sbjct:    1 MATMRCKRRRISTICPAAAGATAAAFLIATTRAFVYQPQRLHVTQHVPVRGSSPDWTAMGRTCVGKNLPSCQSREFPECSLRTRGSTGLTCSSRSGGAAGIPLRNRAPRCPSPTFASSFSCHDAICKPLLSLSPASFSIVPSSRLYASSLPSPKTDEEEEPVPPDAWRLLALSFLCMIICSLDRVAMSVAILPMSLEFGFSGESSEGRRGGREGG 215
The following BLAST results are available for this feature:
BLAST of EWM26498.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108556|gb|EWM26498.1|1.915e-152100.00hypothetical protein Naga_101201g1, partial [Nanno... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4184rna4184Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications