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Properties
| Property Name | Value |
|---|
| Product | Pre-mRNA processing factor 4 |
| Orig transcript id | gnl|cribi|Naga_101678g1.6012.mrna |
| Orig protein id | gnl|cribi|Naga_101678g1.6012 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:1031344..1032529 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4168 ID=rna4168|Name=rna4168|organism=Nannochloropsis gaditana|type=mRNA|length=1081bp
TTGCAATTCGACCCCGCGCCGCGACGAGGGGAGCCGGAGGTGACCAGACG
GACTCCGGACTACTTCCTGTAGCCAGCCCACGCCCGTCAACCGTAAAAGG
GAGGGCGCGCAGACTGTAATAGCGAGGGACGGGAGGGGAGGGAACCGGCG
CGGGGAAGGGGAGGAAGGATGGAGGCAGGAGAGGCACTCCCCGGCAGCGG
GGATGGGCGGAGAAGGAGGAGAAAGGATAAACTTCGACGCGGAGATGGAA
AAGAAAAATGACAAGGACGAGAGCGTATCCATGCGACCACCGCGCCTATG
CCCTGGCGGGGGATCCTTGAAGTCTGCTCTTCTACCCCCTTTGCCAAGGG
AATGTTCCTGTGCGGTAGGCGGGTGAGTCAACTGCCGGCGTTGGCCTTGT
TCAAACACGGTTCTTCTCCCCATGACCGCACCCCAGGGGGGTATCTATTT
CCATGCATCGTGCGGTATTTGGGCACGGGCCTGGCACAGCGAGCCGTGTA
CCGCCTGGAGGGGGAGGGGAGGAGGTAGTGTGGACGCCGGAGGGAGGCTT
GTATCCGCGTGGTTCCAAAGGGAAACGAGGCGCGTGCCCACGGCCCATGC
CGCCCGGGTACCTGTTCCATCACAAAGCAACTCGAGTAAGGAAACGTCAC
CGTTAGCAAATGGCGAACTCCTTCCGTTCGTAACCATCCTCGATGATTCT
TTCCACATGGCCGTGAGTCAGGGTTACTCGAGTCTTGCCCCCTGAGTCTG
GTTATCTTCATTGAGTACCTAAGTGACGCTTCGTATATTTCACTCCATTG
GCCCCCCCCAGCGTCTTTAATATGGAATTGAAACCATCGTATGGTACCAC
CCTCTTTCCCCTTTATCGTTACACCACCAAGCGGTTGTTTCCTCGCTGTA
TCTAACGTATGGTACCGTAAAGTAACATGCATCCTTCGAGGCTAAACGCA
CCCACATCGACCCTTGGCCCTCCCCGTCCATATTTAGAGCCAAACCACCT
ACCTCCAACCATTTATGAAATTATGACCCCTCTTTCTTAACACAGCCGCC
CCAACATTTTCGCAGTGGACACGCTCGCCCA back to topprotein sequence of rna4168 >rna4168-protein ID=rna4168-protein|Name=rna4168|organism=Nannochloropsis gaditana|type=polypeptide|length=204bp
MEALKAELARKKQEKMAMVASSGSNGNGEEGGKKGATQAKYIRQGDVMKA
EAQRRALEQAKRDKEREDARRQRIEDESAAQGSLQARLGQKAADWALNKE
RRKVSGEGAGGMATEGRKEEGKEGEGGNNAGGQGEGIKALRELPLQEVQK
RLRALGKPITLYAEDMEERLERLMAAEAEEREKGVGTEDDFGLAGGFETV
RRGG back to topmRNA from alignment at CM002462.1:1031344..1032529+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4168 ID=rna4168|Name=rna4168|organism=Nannochloropsis gaditana|type=mRNA|length=1186bp|location=Sequence derived from alignment at CM002462.1:1031344..1032529+ (Nannochloropsis gaditana)
AATCCACTCCAACATCGCTTCCTTGCGGCGCCTCGCATGGTGCATGACTG
AGTGACACAGGTGGCAAACGTTGATAGGCAGCTTTGGGTTCAATGTAGGC
GGTATTGCTAACTTGAGTCTAGCCACGTCCCCTGTGtgcgcttctccttc
cctcttacTTAGCTCAGCTTCTCCACGAAAACAGTTTTCACAACCGCGTA
GCCACAGCCGACAATTTTGCTGACTTTGTAACATGGAGGCTTTAAAGGCA
GAGTTGGCCCGGAAAAAACAAGAAAAAATGGCCATGGTGGCGTCTTCAGG
TGCGTGCCCGCTATCCTACCTGTGCTCATGTTTGGGTCGAGAAGGACCGT
TTGGGAAGGGGATCACCGGGACTATGATTGCTGGCATTCGGTCCCATGGC
ATCAGCATACACCTCACAGGCAGCAATGGcaacggagaggagggaggcaa
gaagggagcGACCCAGGCGAAGTACATTAGGCAAGGCGACGtgatgaagg
cggaggcccaAAGACGCGCCCTGGAACAGGCAAAGCGGgacaaagagagg
gaggacgcccGAAGACAACGAATAGAGGTGAGATGAGAGAAAAGTGTGAT
CACGCGTCGCGTCTTGAAGGCACGGATCTAACGCCTGCCTCTTTTGTGTT
CAACGTGCAGGACGAAAGCGCGGCCCAGGGCTCCCTTCAGGCCCGTCTCG
GACAAAAAGCAGCCGATTGGGCGTTGAACAAAGAGCGGAGAAAAGTGTCG
GGcgaaggagcggggggaaTGGCgacagaagggaggaaggaggaaggaaa
ggagggggagggagggaacaatgCCggtgggcagggagagggtaTCAAGG
CGCTGCGTGAACTGCCGCTCCAAGAAGTCCAGAAACGACTGAGGGCCCTT
GGAAAACCGATCACGTACgtacgtgggagggagggagggagggagggagg
gagggatggaaggaaggaggaagggagggggtcaTGAGGGTAGCATCCGG
GTATGATGTACTCAAGCGTGCAATATGATGATGATAATGATTTGGACCGC
AGGTTGTACGCTGAGGATATGGAAGAGCGCCTGGAGCGGTTgatggcggc
ggaggcggaggagcgggagaaaggcgtgGGCACGGAGGATGACTTCGGTC
TGGCCGGCGGTTTTGAGACGgtgaggagaggcggga back to topCoding sequence (CDS) from alignment at CM002462.1:1031344..1032529+ >rna4168 ID=rna4168|Name=rna4168|organism=Nannochloropsis gaditana|type=CDS|length=2452bp|location=Sequence derived from alignment at CM002462.1:1031344..1032529+ (Nannochloropsis gaditana)
ATGGAGGCTTTAAAGGCAGAGTTGGCCCGGAAAAAACAAGAAAAAATGGC
CATGGTGGCGTCTTCAGGCAGCAATGGcaacggagaggagggaggcaaga
agggagcGACCCAGGCGAAGTACATTAGGCAAGGCGACGtgatgaaggcg
gaggcccaAAGACGCGCCCTGGAACAGGCAAAGCGGgacaaagagaggga
ggacgcccGAAGACAACGAATAGAGGACGAAAGCGCGGCCCAGGGCTCCC
TTCAGGCCCGTCTCGGACAAAAAGCAGCCGATTGGGCGTTGAACAAAGAG
CGGAGAAAAGTGTCGGGcgaaggagcggggggaaTGGCgacagaagggag
gaaggaggaaggaaaggagggggagggagggaacaatgCCggtgggcagg
gagagggtaTCAAGGCGCTGCGTGAACTGCCGCTCCAAGAAGTCCAGAAA
CGACTGAGGGCCCTTGGAAAACCGATCACGTTGTACGCTGAGGATATGGA
AGAGCGCCTGGAGCGGTTgatggcggcggaggcggaggagcgggagaaag
gcgtgGGCACGGAGGATGACTTCGGTCTGGCCGGCGGTTTTGAGACGgtg
aggagaggcgggaATGGAGGCTTTAAAGGCAGAGTTGGCCCGGAAAAAAC
AAGAAAAAATGGCCATGGTGGCGTCTTCAGGCAGCAATGGcaacggagag
gagggaggcaagaagggagcGACCCAGGCGAAGTACATTAGGCAAGGCGA
CGtgatgaaggcggaggcccaAAGACGCGCCCTGGAACAGGCAAAGCGGg
acaaagagagggaggacgcccGAAGACAACGAATAGAGGACGAAAGCGCG
GCCCAGGGCTCCCTTCAGGCCCGTCTCGGACAAAAAGCAGCCGATTGGGC
GTTGAACAAAGAGCGGAGAAAAGTGTCGGGcgaaggagcggggggaaTGG
Cgacagaagggaggaaggaggaaggaaaggagggggagggagggaacaat
gCCggtgggcagggagagggtaTCAAGGCGCTGCGTGAACTGCCGCTCCA
AGAAGTCCAGAAACGACTGAGGGCCCTTGGAAAACCGATCACGTTGTACG
CTGAGGATATGGAAGAGCGCCTGGAGCGGTTgatggcggcggaggcggag
gagcgggagaaaggcgtgGGCACGGAGGATGACTTCGGTCTGGCCGGCGG
TTTTGAGACGgtgaggagaggcgggaATGGAGGCTTTAAAGGCAGAGTTG
GCCCGGAAAAAACAAGAAAAAATGGCCATGGTGGCGTCTTCAGGCAGCAA
TGGcaacggagaggagggaggcaagaagggagcGACCCAGGCGAAGTACA
TTAGGCAAGGCGACGtgatgaaggcggaggcccaAAGACGCGCCCTGGAA
CAGGCAAAGCGGgacaaagagagggaggacgcccGAAGACAACGAATAGA
GGACGAAAGCGCGGCCCAGGGCTCCCTTCAGGCCCGTCTCGGACAAAAAG
CAGCCGATTGGGCGTTGAACAAAGAGCGGAGAAAAGTGTCGGGcgaagga
gcggggggaaTGGCgacagaagggaggaaggaggaaggaaaggaggggga
gggagggaacaatgCCggtgggcagggagagggtaTCAAGGCGCTGCGTG
AACTGCCGCTCCAAGAAGTCCAGAAACGACTGAGGGCCCTTGGAAAACCG
ATCACGTTGTACGCTGAGGATATGGAAGAGCGCCTGGAGCGGTTgatggc
ggcggaggcggaggagcgggagaaaggcgtgGGCACGGAGGATGACTTCG
GTCTGGCCGGCGGTTTTGAGACGgtgaggagaggcgggaATGGAGGCTTT
AAAGGCAGAGTTGGCCCGGAAAAAACAAGAAAAAATGGCCATGGTGGCGT
CTTCAGGCAGCAATGGcaacggagaggagggaggcaagaagggagcGACC
CAGGCGAAGTACATTAGGCAAGGCGACGtgatgaaggcggaggcccaAAG
ACGCGCCCTGGAACAGGCAAAGCGGgacaaagagagggaggacgcccGAA
GACAACGAATAGAGGACGAAAGCGCGGCCCAGGGCTCCCTTCAGGCCCGT
CTCGGACAAAAAGCAGCCGATTGGGCGTTGAACAAAGAGCGGAGAAAAGT
GTCGGGcgaaggagcggggggaaTGGCgacagaagggaggaaggaggaag
gaaaggagggggagggagggaacaatgCCggtgggcagggagagggtaTC
AAGGCGCTGCGTGAACTGCCGCTCCAAGAAGTCCAGAAACGACTGAGGGC
CCTTGGAAAACCGATCACGTTGTACGCTGAGGATATGGAAGAGCGCCTGG
AGCGGTTgatggcggcggaggcggaggagcgggagaaaggcgtgGGCACG
GAGGATGACTTCGGTCTGGCCGGCGGTTTTGAGACGgtgaggagaggcgg
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