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Properties
| Property Name | Value |
|---|
| Product | eukaryotic translation initiation factor |
| Orig transcript id | gnl|cribi|Naga_100141g11.8375.mrna |
| Orig protein id | gnl|cribi|Naga_100141g11.8375 |
| Gene | EIF2beta |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:987816..989437 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4151 ID=rna4151|Name=rna4151|organism=Nannochloropsis gaditana|type=mRNA|length=821bp
CATCGCTTGGGGGCCAAGGTGTATGAAGGGGATTGTTTGTCCCTTTTTTG
GTGGTTGTGTGTGTTGTGGACGGAAGATTGCGTCTGGGACATGATCCTTT
TTCCTGACCTTGCCTCCTCCCAATGCTGCCATTTATTCACAGAAGGAGGG
GTTGATACACCGGGAGGGCAGCAAGTCTTTCTGCACCTGCCACTCGTGTA
CAGGATGATCATTCCTGTCCGCTGCTTCACTTGTGGCAAGGTTATTGGAA
ACAAATACGAAGTCTACGTCGAGTACCTCAAAAACGATTTCAAGGAGGGT
GTGGCGCTCGATAAAGTAGGCCTGAAGCGGTATTGCTGTCGACGGATGTT
GCTGACTCACGTAGACCTGATCAGCAAGCTCCTCAATTACAACACTTTGG
CCAAGGCAGGCTACGTCAAGGAGGGGGAATAGAAATTCGCCAAGGAATTA
GAGGCGTGCTGATTGTCCCATGTACACAAGATTCATGATGGAGGACCTCC
CGGAAAAAGAAAAAAGAAAGTTGCTGAAAGTTAGGCACCGGACGTGGAGA
CGGCTCTCATCCACCCGTATGTTCACTGGCTACCGAAGTATTACGTGTCA
AGAAAGCCGCCAGATTCTATGCACATTTAATCATTATTTTCTTCTTGGAC
AGCCTGTTAATTTGACAGCGCGCTTCACGTAAAACTCATGTTGCATTTTT
TGTTTAGTGTCGCCTTTCGACTCCTCCCTCGCATTCGCTGCTGTGGAGAA
GTGCACAACAGGAGTCGGGCATCTTGCCGAGGACACCTTCACGCTTCTCC
TCACAGGGTTTGCTTGGAAAA back to topprotein sequence of rna4151 >rna4151-protein ID=rna4151-protein|Name=rna4151|organism=Nannochloropsis gaditana|type=polypeptide|length=313bp
MADVTEEENPTATEPTEGDDDVDAGLFDGKKKKKKKTKEGGEESGASADL
DAVFAVKKKKSSKKEKKETEDGEDNGGDDLLDEMFASKKKKSSKKEKKEK
EDDGGGEDAGGAGGDEVDLDAAFAGSKKKKRSKRKDEGAEAGNAVYDSNE
ANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWD
NFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESL
LRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGF
HAQTRADRRALRK back to topmRNA from alignment at CM002462.1:987816..989437+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4151 ID=rna4151|Name=rna4151|organism=Nannochloropsis gaditana|type=mRNA|length=1622bp|location=Sequence derived from alignment at CM002462.1:987816..989437+ (Nannochloropsis gaditana)
CCAGCTATTCAGCACTCGGACGCCACTGATTTTTATTCCACCACTCTTAC
TCCTAGATTGCCACGAAATTACTTACAAGGACTGGGTGGGGTATAGCCTT
TGAGCCAGGTGATACGATGGCGGACgtaacggaggaagagaacccCACAG
CCACGGAGGTACGTGTCATCGGACGGGTGACAAAAGCCGTCatcatcttt
tcccctttaCTTTCCATCTTCCACCGCTCCTGCGCATCGAATGGGGTTGA
GAGTGATGGACGGGCTCTcgacgtggagggcgagagtATTGTGGTACCGC
CCTGGTATAGAAAGTCGTGGATTTATATATTATATTTATTCGTGTGTTCT
CACGAGCACACGCTGCCACAATCACGGTCCACGACGCTTTGAGTTGTACT
CATTCGTGCGCCATACCGTACACACACATATATACATTATTATCTTTTGC
CATACTCCACCAGCCGACCGAGGGCGATGACGACGTAGATGCGGGCCTTT
TCGAcggcaaaaagaagaagaagaagaagaccaaagaaggaggagaggag
tcgGGGGCAAGCGCCGATTTGGACGCTGTGTTTGCGgtcaaaaagaagaa
gagcagcaagaaggagaagaaggaaacagaggatggggaggataACGGAG
GGGATGATTTGTTGGACGAGATGTTTGCAAgtaaaaaaaagaagagcagc
aagaaagagaagaaggagaaggaggatgacggggggggggaggacgcagg
gggggccgggggcgacgAGGTGGATTTGGACGCGGCGTTTGCCGgaagca
agaagaagaagcggagcaAGCGGAAAGACGAAGGGGCTGAGGCGGGGAAT
GCCGTTTACGACTCGAACGAGGCGAACTACAGCTACGACGAATTGTTGGA
ACGGATGCAAACGTTGCTGCAAGACGGCGACCCGACCAAATCCGTCACGT
CCGGGCGCGTGCCCATCAAAATGCCGCCCATCACTCTGGTCCGCATTGGC
ACGAAGAAAACCCGGTGGGACAATTTCCACGACATTTGCAAGTGCATGAA
CCGGACCTTGGAGCACGTCTTTCAGTTCTTGGTGGCCGAGTTGGGCACGG
AGGGCTCCATCGACGGGAACAATCGGCTGGTTTTGCGGGGAAAGTACATC
CCTAAGGGCATCGAGTCCTTGCTAAGGAAATACATTGGCGAGTACGTGGC
GTGCAGCACCTGCAAGAGCCCcaacacctccctctcccgggaCAGCgttt
cgcgcctttttttcgtCCACTGCCAATCCTGCGgttcctcccgctccgtc
GCCCCGATTCGAACCGGTTTCCATGCACAGACACGGGCAGATCGACGGGC
ATTGCGAAAGTAAAAATGGGCGGGGAGCATACCGCGGGGGGTAtcatgga
ggtggggggaagggagagggaaagggtcaGGGGGAAAGCATAAGCAAGAC
TCAGGTGTAATACAGGCATGTGTGGGGGAATGGCAAAGGACGAAGGCcgt
gagggaaaggtggaggtcagggggggggggggctccaGGACCCTCGGGGC
TCGTCAATGGCGTggccaagggaaggagaagagaggttTTGAAAACAGCG
TGGTACGGCTGGCGCGAAGCTC back to topCoding sequence (CDS) from alignment at CM002462.1:987816..989437+ >rna4151 ID=rna4151|Name=rna4151|organism=Nannochloropsis gaditana|type=CDS|length=1884bp|location=Sequence derived from alignment at CM002462.1:987816..989437+ (Nannochloropsis gaditana)
ATGGCGGACgtaacggaggaagagaacccCACAGCCACGGAGCCGACCGA
GGGCGATGACGACGTAGATGCGGGCCTTTTCGAcggcaaaaagaagaaga
agaagaagaccaaagaaggaggagaggagtcgGGGGCAAGCGCCGATTTG
GACGCTGTGTTTGCGgtcaaaaagaagaagagcagcaagaaggagaagaa
ggaaacagaggatggggaggataACGGAGGGGATGATTTGTTGGACGAGA
TGTTTGCAAgtaaaaaaaagaagagcagcaagaaagagaagaaggagaag
gaggatgacggggggggggaggacgcagggggggccgggggcgacgAGGT
GGATTTGGACGCGGCGTTTGCCGgaagcaagaagaagaagcggagcaAGC
GGAAAGACGAAGGGGCTGAGGCGGGGAATGCCGTTTACGACTCGAACGAG
GCGAACTACAGCTACGACGAATTGTTGGAACGGATGCAAACGTTGCTGCA
AGACGGCGACCCGACCAAATCCGTCACGTCCGGGCGCGTGCCCATCAAAA
TGCCGCCCATCACTCTGGTCCGCATTGGCACGAAGAAAACCCGGTGGGAC
AATTTCCACGACATTTGCAAGTGCATGAACCGGACCTTGGAGCACGTCTT
TCAGTTCTTGGTGGCCGAGTTGGGCACGGAGGGCTCCATCGACGGGAACA
ATCGGCTGGTTTTGCGGGGAAAGTACATCCCTAAGGGCATCGAGTCCTTG
CTAAGGAAATACATTGGCGAGTACGTGGCGTGCAGCACCTGCAAGAGCCC
caacacctccctctcccgggaCAGCgtttcgcgcctttttttcgtCCACT
GCCAATCCTGCGgttcctcccgctccgtcGCCCCGATTCGAACCGGTTTC
CATGCACAGACACGGGCAGATCGACGGGCATTGCGAAAGTAAATGGCGGA
CgtaacggaggaagagaacccCACAGCCACGGAGCCGACCGAGGGCGATG
ACGACGTAGATGCGGGCCTTTTCGAcggcaaaaagaagaagaagaagaag
accaaagaaggaggagaggagtcgGGGGCAAGCGCCGATTTGGACGCTGT
GTTTGCGgtcaaaaagaagaagagcagcaagaaggagaagaaggaaacag
aggatggggaggataACGGAGGGGATGATTTGTTGGACGAGATGTTTGCA
Agtaaaaaaaagaagagcagcaagaaagagaagaaggagaaggaggatga
cggggggggggaggacgcagggggggccgggggcgacgAGGTGGATTTGG
ACGCGGCGTTTGCCGgaagcaagaagaagaagcggagcaAGCGGAAAGAC
GAAGGGGCTGAGGCGGGGAATGCCGTTTACGACTCGAACGAGGCGAACTA
CAGCTACGACGAATTGTTGGAACGGATGCAAACGTTGCTGCAAGACGGCG
ACCCGACCAAATCCGTCACGTCCGGGCGCGTGCCCATCAAAATGCCGCCC
ATCACTCTGGTCCGCATTGGCACGAAGAAAACCCGGTGGGACAATTTCCA
CGACATTTGCAAGTGCATGAACCGGACCTTGGAGCACGTCTTTCAGTTCT
TGGTGGCCGAGTTGGGCACGGAGGGCTCCATCGACGGGAACAATCGGCTG
GTTTTGCGGGGAAAGTACATCCCTAAGGGCATCGAGTCCTTGCTAAGGAA
ATACATTGGCGAGTACGTGGCGTGCAGCACCTGCAAGAGCCCcaacacct
ccctctcccgggaCAGCgtttcgcgcctttttttcgtCCACTGCCAATCC
TGCGgttcctcccgctccgtcGCCCCGATTCGAACCGGTTTCCATGCACA
GACACGGGCAGATCGACGGGCATTGCGAAAGTAA back to top
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