EWM26528.1, cds4141 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|585108606|gb|EWM26528.1| (eukaryotic translation initiation factor [Nannochloropsis gaditana]) HSP 1 Score: 635.95 bits (1639), Expect = 0.000e+0 Identity = 313/313 (100.00%), Postives = 313/313 (100.00%), Query Frame = 0
Query: 1 MADVTEEENPTATEPTEGDDDVDAGLFDGKKKKKKKTKEGGEESGASADLDAVFAVKKKKSSKKEKKETEDGEDNGGDDLLDEMFASKKKKSSKKEKKEKEDDGGGEDAGGAGGDEVDLDAAFAGSKKKKRSKRKDEGAEAGNAVYDSNEANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 313
MADVTEEENPTATEPTEGDDDVDAGLFDGKKKKKKKTKEGGEESGASADLDAVFAVKKKKSSKKEKKETEDGEDNGGDDLLDEMFASKKKKSSKKEKKEKEDDGGGEDAGGAGGDEVDLDAAFAGSKKKKRSKRKDEGAEAGNAVYDSNEANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK
Sbjct: 1 MADVTEEENPTATEPTEGDDDVDAGLFDGKKKKKKKTKEGGEESGASADLDAVFAVKKKKSSKKEKKETEDGEDNGGDDLLDEMFASKKKKSSKKEKKEKEDDGGGEDAGGAGGDEVDLDAAFAGSKKKKRSKRKDEGAEAGNAVYDSNEANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 313
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|298712737|emb|CBJ33336.1| (eukaryotic initiation factor 2 beta subunit [Ectocarpus siliculosus]) HSP 1 Score: 242.276 bits (617), Expect = 2.407e-76 Identity = 112/163 (68.71%), Postives = 128/163 (78.53%), Query Frame = 0
Query: 150 EANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADRRALR 312
E Y+Y+ LLER+Q LL +P + R I + P L+R+GT+KT W NF DIC+ M R EHVF F+VAELGTEGSIDGN RLVLRGKY+PK IESLLRKYI EYV C C+SPNT+L+RD VSRLFFVHCQ CGSSRSVAPIR+GFHAQTRADRRALR
Sbjct: 69 EGRYNYETLLERIQNLLHVNNPE---LAERSRITLKPPQLMRMGTRKTLWANFQDICQLMKRQPEHVFSFVVAELGTEGSIDGNQRLVLRGKYVPKYIESLLRKYIVEYVTCQMCRSPNTTLTRDPVSRLFFVHCQDCGSSRSVAPIRSGFHAQTRADRRALR 228
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|676381369|ref|XP_009033963.1| (hypothetical protein AURANDRAFT_14493, partial [Aureococcus anophagefferens] >gi|323455747|gb|EGB11615.1| hypothetical protein AURANDRAFT_14493, partial [Aureococcus anophagefferens]) HSP 1 Score: 227.254 bits (578), Expect = 1.524e-71 Identity = 107/157 (68.15%), Postives = 123/157 (78.34%), Query Frame = 0
Query: 153 YSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADRR 309
YSY ELL+R+ +LQ +P S M P L+R+GTKKT W NF +ICK M+R+ EHVFQF +AELGTEGSIDG RLV+RGKY+PK IESLLRKYI EYV C C+SP+TSL+RDSVSRLFF+HCQ CGSSRSVAPIR GFHAQTRADRR
Sbjct: 1 YSYKELLDRVVGILQANNPELSEKRRHT---MKPPQLMRVGTKKTLWVNFQEICKMMHRSPEHVFQFFMAELGTEGSIDGTQRLVIRGKYVPKYIESLLRKYIVEYVTCQMCRSPSTSLTRDSVSRLFFLHCQDCGSSRSVAPIRAGFHAQTRADRR 154
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|695431130|ref|XP_009530606.1| (hypothetical protein PHYSODRAFT_259181, partial [Phytophthora sojae] >gi|348673358|gb|EGZ13177.1| hypothetical protein PHYSODRAFT_259181, partial [Phytophthora sojae]) HSP 1 Score: 219.55 bits (558), Expect = 1.550e-68 Identity = 104/159 (65.41%), Postives = 124/159 (77.99%), Query Frame = 0
Query: 153 YSY-DELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADRRA 310
YSY DELL R+ L + +P + R M P L+R+GTKKT W NF +IC+ M+R+ EHV QF +AELGTEGSIDGN RLV+RG+Y+PK IESLLRKYI EYV+C C+SPNT+L+RDSVSRL+FVHCQ CGSSRSVA IR+GFHA TRADRRA
Sbjct: 1 YSYKDELLARIMAKLHENNPE---LTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFHAATRADRRA 156
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|1214691625|gb|OWZ06483.1| (Eukaryotic translation initiation factor 2 subunit beta [Phytophthora megakarya]) HSP 1 Score: 213.001 bits (541), Expect = 8.428e-65 Identity = 100/161 (62.11%), Postives = 122/161 (75.78%), Query Frame = 0
Query: 142 GNAVYDSNEANYSY-DELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFH 301
GN+V + A YSY DELL R+ L + +P + R M P L+R+GTKKT W NF +IC+ M+R+ EHV QF +AELGTEGSIDGN RLV+RG+Y+PK IESLLRKYI EYV+C C+SPNT+L+RDSVSRL+FVHCQ CGSSRSVA IR+GFH
Sbjct: 62 GNSVLVQDPATYSYKDELLARIMAKLHENNPE---LTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFH 219
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|695431125|ref|XP_009530605.1| (hypothetical protein PHYSODRAFT_346938 [Phytophthora sojae] >gi|348673357|gb|EGZ13176.1| hypothetical protein PHYSODRAFT_346938 [Phytophthora sojae]) HSP 1 Score: 211.46 bits (537), Expect = 3.798e-64 Identity = 99/160 (61.88%), Postives = 121/160 (75.62%), Query Frame = 0
Query: 143 NAVYDSNEANYSY-DELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFH 301
N+V + A YSY DELL R+ L + +P + R M P L+R+GTKKT W NF +IC+ M+R+ EHV QF +AELGTEGSIDGN RLV+RG+Y+PK IESLLRKYI EYV+C C+SPNT+L+RDSVSRL+FVHCQ CGSSRSVA IR+GFH
Sbjct: 65 NSVLVQDPATYSYKDELLARIMAKLHENNPE---LTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFH 221
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|669157888|ref|XP_008614506.1| (translation initiation factor 2 subunit 2 [Saprolegnia diclina VS20] >gi|530733862|gb|EQC32104.1| translation initiation factor 2 subunit 2 [Saprolegnia diclina VS20]) HSP 1 Score: 210.305 bits (534), Expect = 7.471e-64 Identity = 98/167 (58.68%), Postives = 123/167 (73.65%), Query Frame = 0
Query: 138 GAEAGNAVYDSN---EANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFH 301
EA AV D++ A+Y+Y+E+L+R+ L + +P S R M P L+R+GTKKT W NF +ICK M+R EHV QF ++ELGTEGSIDG+ RLV+RG+Y+PK IESLLRKYI EYV C C+SPNT+L+RD+VSRL FVHCQ CGSSRSVA IR+GFH
Sbjct: 53 STEAAPAVVDASIEDPASYTYEEMLDRVMNKLHELNPE---LSNRTKHTMKPPQLMRVGTKKTLWVNFQEICKMMHRNPEHVLQFTLSELGTEGSIDGSQRLVIRGRYVPKYIESLLRKYITEYVTCQMCRSPNTTLTRDNVSRLHFVHCQECGSSRSVAAIRSGFH 216
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|301098840|ref|XP_002898512.1| (eukaryotic translation initiation factor 2 subunit beta [Phytophthora infestans T30-4] >gi|262104937|gb|EEY62989.1| eukaryotic translation initiation factor 2 subunit beta [Phytophthora infestans T30-4]) HSP 1 Score: 208.764 bits (530), Expect = 3.283e-63 Identity = 98/160 (61.25%), Postives = 121/160 (75.62%), Query Frame = 0
Query: 143 NAVYDSNEANYSY-DELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFH 301
++V + A YSY DELL R+ L + +P + R M P L+R+GTKKT W NF +IC+ M+R+ EHV QF +AELGTEGSIDGN RLV+RG+Y+PK IESLLRKYI EYV+C C+SPNT+L+RDSVSRL+FVHCQ CGSSRSVA IR+GFH
Sbjct: 65 SSVLVQDPATYSYKDELLARIMAKLHENNPE---LTDRKRHTMKPPQLMRVGTKKTLWVNFQEICQMMHRSPEHVLQFTLAELGTEGSIDGNQRLVIRGRYVPKYIESLLRKYITEYVSCQMCRSPNTTLTRDSVSRLYFVHCQDCGSSRSVAAIRSGFH 221
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|870764480|gb|KMS65186.1| (hypothetical protein BVRB_038540, partial [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 204.527 bits (519), Expect = 1.682e-62 Identity = 91/163 (55.83%), Postives = 124/163 (76.07%), Query Frame = 0
Query: 146 YDSNEANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADR 308
+D + +Y Y E+L+R+ +LL++ +P S R MPP +VRIG++KT W N IC +NR +EH+ F++AELGTEGS+DGN RLV++G+Y+PK IESLL+KYI EYV CS CK+P T+LSRDS++RL+F+ C+ CGSSRSVAPI++GFHA RADR
Sbjct: 5 WDGTDRDYGYIEMLDRIFSLLREKNPN---LSERKRHTMPPPQMVRIGSRKTMWANIAQICDLLNRNMEHMISFIMAELGTEGSVDGNQRLVIKGRYLPKQIESLLKKYIKEYVECSMCKNPETTLSRDSLTRLYFIKCEMCGSSRSVAPIKSGFHATLRADR 164
BLAST of EWM26528.1 vs. NCBI_GenBank
Match: gi|698801622|ref|XP_009833840.1| (hypothetical protein H257_09344 [Aphanomyces astaci] >gi|574111432|gb|ETV76928.1| hypothetical protein H257_09344 [Aphanomyces astaci]) HSP 1 Score: 205.297 bits (521), Expect = 1.186e-61 Identity = 94/166 (56.63%), Postives = 124/166 (74.70%), Query Frame = 0
Query: 148 SNEANYSYDELLERMQTLLQDGDPTKSVTSGRVPIKMPPITLVRIGTKKTRWDNFHDICKCMNRTLEHVFQFLVAELGTEGSIDGNNRLVLRGKYIPKGIESLLRKYIGEYVACSTCKSPNTSLSRDSVSRLFFVHCQSCGSSRSVAPIRTGFHAQTRADRRALRK 313
S Y+Y+++L+R+ L + +P + + I PP L+R+GTKKT W NF +ICK M+R EHV QF ++ELGTEG++DG RL++RG+Y+PK IESLLRKYI EYV C C+SPNT+L+RD+V+RL FV+CQ C SSRSVA IR+GFHA TRADRRA +K
Sbjct: 79 STTCAYTYEDMLDRIMNKLHENNP--DLADRKKAIIKPP-QLMRVGTKKTLWVNFQEICKMMHRNPEHVLQFTLSELGTEGNLDGTQRLIIRGRYVPKYIESLLRKYITEYVTCQMCRSPNTTLTRDNVTRLHFVNCQECESSRSVAVIRSGFHATTRADRRAAKK 241 The following BLAST results are available for this feature:
BLAST of EWM26528.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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