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Properties
| Property Name | Value |
|---|
| Product | dna-directed rna polymerases and iii subunit rpabc5 |
| Orig transcript id | gnl|cribi|Naga_100141g12.8383.mrna |
| Orig protein id | gnl|cribi|Naga_100141g12.8383 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:985863..987215 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4150 ID=rna4150|Name=rna4150|organism=Nannochloropsis gaditana|type=mRNA|length=1573bp
ACAGAATGATTGGTCCAGGGTATCTGAAAGATAATTTAGAGCATGGGGCG
CCACTACCGGAAAGGCTGAAAGAAACGTTCCACCTCCTTCGTGAGCTAGA
CGTGGCCACAAGGCTCCTGACAACACGGGCCGACCGCCTCATCGGCGCCT
CTGACGGCCTCCCTGAGGAGAACGGAGTGCATGAAGAGGAGGACGCCGAG
GATGATGATGAGGACTATGGGGTAGAGAGGGAGGAAGAGGATGAAGAAGA
AGAAGATGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAAG
GGGAGGAAGAAGAGGAAGAAGAGGACATTGGACGCGGGAATAGTAGAGGG
GGAAATCGATGTACAAGGAATGGAGGGCAAAACTCGGGTCGAAAAGTCGC
AGCTTGGAAGGAGGAAGAACGGAGAGGAGGGAGAGGGAGGGAAAAAAGGG
AGCGAGAAGTCTCCCATGGCCGTCTACGGGGCAGGAGAGTACCGGAGGAG
GAGGAGGAGGAAGAGGTAGAGGAGGAGGAAGAAGAAGAAGAAGAGGAGCA
GGAGGAGGAAGAAGAGGTAGAGGAGGAGGAGGAAGAAGAAGAGGAGGAAA
TAGACGGTTCAGGGACCTGTCTGGCCTCTTTGCGCGAACTCCAACATGCG
GCCTTGCGTTGCGCCGACGAGAAGATTGCCCTCGCCATCCACGCCTACGA
CCTGCTGGACACCCAGATTCGGCATTTGGACTCCGACATTCGGCGTTTCG
AGCGGCATTACGGCTACGTCCCTCCCATGGTGGAGGAGGCCGCTCGGCGG
GCGGAGGAGCAGCAGCAACAGGCGCCAGGGGGGAACGGTCACGTGGAAGA
ATGGTACAGGGGCCGCCGCAAGAGGAGGACGGGGGCGAGGGGCGCGAAGA
GAAGGAGGGGAAGTATGAACGGTGAAGCCACCACGGGCGGGGCCGGAAAC
CCAGTGTCGCTGGTTGGCCCAGGCGGGGGGCAAGGAGGGGGAGGGGGAGG
GGGAGGGGGAGGGGGGGAGGGAGGGGCACTGATGGTTGGGGGCGGTCCTG
GCGTGGACGTGGACCCGAACGAGCCCATCTACTGCTTCTGTCGGAACATT
GCCTACGGGGAGATGATTGGCTGCGACAACCCCAACTGCCAGTACGAATG
GTTCCACTACAAGTGCGTGGGCCTGACGCGTCAACCCACCGCCCGGAACC
GATGGTTGTGCCCCAAGTGTAAGAGGGACGCGGGCTGGAAGGGTAGGGGC
TCCCTGGGGTCGTCGACCGCGGCGGCGGTGTTGGGTCTGCTGGAGGAGAA
GAAGAAAGGGTATTGAGGGCGAGGGAGGGAGGGAAGGAGGGAGGGAGGGA
AGGAGGGCTGTACAGCGGAGCGAGGACGCGGAGCATTTTACGGGCAAGGC
TGGCTTGAACGCGAACATTTTTGGGAGGAATGGGGAGCTACCGTATGTGA
ATCTTGAACAGAAGGGCGGCTACATATACATATACATACGACATGCATTG
GGTGACACAAAACGCGGAAGTCATGGAACAGAAAAGCCATTGACCTCCAC
CCACGGAGGGAGTTGGCAGGGAC back to topprotein sequence of rna4150 >rna4150-protein ID=rna4150-protein|Name=rna4150|organism=Nannochloropsis gaditana|type=polypeptide|length=113bp
MILFPDLASSQCCHLFTEGGVDTPGGQQVFLHLPLVYRMIIPVRCFTCGK
VIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNY
NTLAKAGYVKEGE back to topmRNA from alignment at CM002462.1:985863..987215+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4150 ID=rna4150|Name=rna4150|organism=Nannochloropsis gaditana|type=mRNA|length=1353bp|location=Sequence derived from alignment at CM002462.1:985863..987215+ (Nannochloropsis gaditana)
CATCGCTTGGGGGCCAAGGTGTATGAAGGGGATTGTTTGTCCCTTTTTTG
GTGGTTGTGTGTGTTGTGGACGGAAGATTGCGTCTGGGACATGATCCTTT
TTCCTgaccttgcctcctcccaatGCTGCCATTTATTCacagaaggaggg
gttgaTACACCGGGAGGGCAGCAAGTCTTTCTGCACCTGCCACTCGTGTA
CAGGATGATCATTCCTGTCCGCTGCTTCACTTGTGGCAAGGTAAAAGTGA
TAACTAGGTTGGAGCAAGGTTGGAGCAGGGGAGGTCGGATGGAAAGAATC
CGTCCAGgcagcagggaaggggcaggcaAACACAGGCAAAAGAGAGGCAT
ACTATGTATACGAGCGTAAGGGCATGCAGGCCGGCTTGTCGTCGTACCGA
TTACAAAGATGAGGAACCCATTTGAATCGGTTTGCATCTATTTGATGTCC
TCTTTATCCTTCGATGCGCAGGTTATTGGAAACAAATACGAAGTCTACGT
CGAGTACCTCAAAAACGATTTCAAGGAGGGGTAAGTGACATGACAGTGGT
AACCACCACCTGATGAGAAGATAActgcagcagcaaaagcaccTGCGTAG
GACATAATATTGACTCCCAATACTCTCACACGGCCTTTTCATGATTTTGT
ATTGAAGGCACtcactttccccctcccttcccgcctctctctccctaaAT
ATTGGCATATCCCCCAATGAACCCTGCAAATGTTGCCTACCCATGTAGTG
TGGCGCTCGATAAAGTAGGCCTGAAGCGGTATTGCTGTCGACGGATGTTG
CTGACTCACGTAGACCTGATCAGCAAGCTCCTCAATTACAACACTTTGGC
CAAGGCAGGCTacgtcaaggagggggaatagAAATTCGCCAAGGAATTAG
AGGCGTGCTGATTGTCCCATGTACACAAGATTCATGATGGAGGACCTccc
ggaaaaagaaaaaagaaagttGCTGAAAGTTAGGCACCGGACGTGGAGAC
GGCTCTCATCCACCCGTATGTTCACTGGCTACCGAAGTATTACGTGTCAA
GAAAGCCGCCAGATTCTATGCACATTTAATCATTATTTTCTTCTTGGACA
GCCTGTTAATTTGACAGCGCGCTTCACGTAAAACTCATGTTGCATTTTTT
GTTTAGTGTCGCCTTtcgactcctccctcgcattcGCTGCTGTGGAGAAG
TGCACAACAGGAGTCGGGCATCTGTACGTAGTTTTCACATTTTCTGTTTT
ACTCTTGCATATTAACGAGCCCGGATCATTTGATATTTAATTGGCCTTTC
CCATAGTGCCGAGGACACCTTCACGCTTCTCCTCACAGGGTTTGCTTGGA
AAA back to topCoding sequence (CDS) from alignment at CM002462.1:985863..987215+ >rna4150 ID=rna4150|Name=rna4150|organism=Nannochloropsis gaditana|type=CDS|length=1026bp|location=Sequence derived from alignment at CM002462.1:985863..987215+ (Nannochloropsis gaditana)
ATGATCCTTTTTCCTgaccttgcctcctcccaatGCTGCCATTTATTCac
agaaggaggggttgaTACACCGGGAGGGCAGCAAGTCTTTCTGCACCTGC
CACTCGTGTACAGGATGATCATTCCTGTCCGCTGCTTCACTTGTGGCAAG
GTTATTGGAAACAAATACGAAGTCTACGTCGAGTACCTCAAAAACGATTT
CAAGGAGGGTGTGGCGCTCGATAAAGTAGGCCTGAAGCGGTATTGCTGTC
GACGGATGTTGCTGACTCACGTAGACCTGATCAGCAAGCTCCTCAATTAC
AACACTTTGGCCAAGGCAGGCTacgtcaaggagggggaatagATGATCCT
TTTTCCTgaccttgcctcctcccaatGCTGCCATTTATTCacagaaggag
gggttgaTACACCGGGAGGGCAGCAAGTCTTTCTGCACCTGCCACTCGTG
TACAGGATGATCATTCCTGTCCGCTGCTTCACTTGTGGCAAGGTTATTGG
AAACAAATACGAAGTCTACGTCGAGTACCTCAAAAACGATTTCAAGGAGG
GTGTGGCGCTCGATAAAGTAGGCCTGAAGCGGTATTGCTGTCGACGGATG
TTGCTGACTCACGTAGACCTGATCAGCAAGCTCCTCAATTACAACACTTT
GGCCAAGGCAGGCTacgtcaaggagggggaatagATGATCCTTTTTCCTg
accttgcctcctcccaatGCTGCCATTTATTCacagaaggaggggttgaT
ACACCGGGAGGGCAGCAAGTCTTTCTGCACCTGCCACTCGTGTACAGGAT
GATCATTCCTGTCCGCTGCTTCACTTGTGGCAAGGTTATTGGAAACAAAT
ACGAAGTCTACGTCGAGTACCTCAAAAACGATTTCAAGGAGGGTGTGGCG
CTCGATAAAGTAGGCCTGAAGCGGTATTGCTGTCGACGGATGTTGCTGAC
TCACGTAGACCTGATCAGCAAGCTCCTCAATTACAACACTTTGGCCAAGG
CAGGCTacgtcaaggagggggaatag back to top
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