EWM26536.1, cds4140 (CDS) Nannochloropsis gaditana

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|585108614|gb|EWM26536.1| (dna-directed rna polymerases and iii subunit rpabc5 [Nannochloropsis gaditana])

HSP 1 Score: 233.417 bits (594), Expect = 7.716e-78
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0

Query:    1 MILFPDLASSQCCHLFTEGGVDTPGGQQVFLHLPLVYRMIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAKAGYVKEGE 113
            MILFPDLASSQCCHLFTEGGVDTPGGQQVFLHLPLVYRMIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAKAGYVKEGE
Sbjct:    1 MILFPDLASSQCCHLFTEGGVDTPGGQQVFLHLPLVYRMIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAKAGYVKEGE 113          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|676396265|ref|XP_009041410.1| (hypothetical protein AURANDRAFT_33434 [Aureococcus anophagefferens] >gi|323447953|gb|EGB03858.1| hypothetical protein AURANDRAFT_33434 [Aureococcus anophagefferens])

HSP 1 Score: 115.161 bits (287), Expect = 1.684e-31
Identity = 53/67 (79.10%), Postives = 60/67 (89.55%), Query Frame = 0

Query:   39 MIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAK 105
            MIIPVRCFTCGKVIGNK+E Y+E LK D+ EG ALD++GLKRYCCRRM+LTHVDLI KLLNYNTL +
Sbjct:    1 MIIPVRCFTCGKVIGNKWESYLELLKADYSEGDALDELGLKRYCCRRMVLTHVDLIEKLLNYNTLER 67          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|1210514475|dbj|GAX26584.1| (DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Fistulifera solaris] >gi|1210517865|dbj|GAX23266.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Fistulifera solaris])

HSP 1 Score: 114.005 bits (284), Expect = 4.380e-31
Identity = 52/64 (81.25%), Postives = 57/64 (89.06%), Query Frame = 0

Query:   39 MIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNT 102
            MIIPVRCFTCGKVIGNK+E Y+  L+ DF EG ALD++GLKRYCCRRMLLTHVDLI KLLNYNT
Sbjct:    1 MIIPVRCFTCGKVIGNKWETYLSLLQADFSEGDALDELGLKRYCCRRMLLTHVDLIEKLLNYNT 64          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|1011604411|gb|KYO41509.1| (DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Alligator mississippiensis])

HSP 1 Score: 114.39 bits (285), Expect = 7.159e-31
Identity = 54/91 (59.34%), Postives = 65/91 (71.43%), Query Frame = 0

Query:   17 TEGGVDTPGGQQVFLHLPLVY--RMIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAK 105
            T  G D P  ++V   +P     RMIIPVRCFTCGK++GNK+E Y+  L+ ++ EG ALD +GLKRYCCRRMLL HVDLI KLLNY  L K
Sbjct:   14 TTNGADPPSARRVAARVPPSSCRRMIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLLNYAPLEK 104          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|210075220|ref|XP_002143005.1| (YALI0B04851p [Yarrowia lipolytica CLIB122] >gi|199425138|emb|CAR64282.1| YALI0B04851p [Yarrowia lipolytica CLIB122] >gi|1078654130|gb|AOW01245.1| hypothetical protein YALI1_B06735g [Yarrowia lipolytica] >gi|1093601673|emb|SEI34179.1| YALIA101S04e12486g1_1 [Yarrowia lipolytica])

HSP 1 Score: 114.39 bits (285), Expect = 7.786e-31
Identity = 52/79 (65.82%), Postives = 62/79 (78.48%), Query Frame = 0

Query:   31 LHLPLVYRMIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAKAGYV 109
            LH    + MIIPVRCF+CGKV+G+K+E Y+ YL++D  EG ALDK+ LKRYCCRRM+LTHVDLI K L YNTL K G V
Sbjct:   27 LHTDQTHTMIIPVRCFSCGKVVGDKWETYLTYLQDDMSEGDALDKLELKRYCCRRMILTHVDLIEKFLRYNTLEKKGDV 105          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|508708631|gb|EOY00528.1| (RNA polymerases N / 8 kDa subunit [Theobroma cacao])

HSP 1 Score: 114.39 bits (285), Expect = 8.820e-31
Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = 0

Query:   38 RMIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAKA 106
            RMIIPVRCFTCGKVIGNK++ Y++ L+ D+ EG ALD +GL RYCCRRML+THVDLI KLLNYNTL K+
Sbjct:   42 RMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKS 110          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|1063466975|ref|XP_017970016.1| (PREDICTED: DNA-directed RNA polymerases I, II, and III subunit RPABC5 isoform X1 [Theobroma cacao])

HSP 1 Score: 114.39 bits (285), Expect = 9.214e-31
Identity = 51/69 (73.91%), Postives = 60/69 (86.96%), Query Frame = 0

Query:   38 RMIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAKA 106
            RMIIPVRCFTCGKVIGNK++ Y++ L+ D+ EG ALD +GL RYCCRRML+THVDLI KLLNYNTL K+
Sbjct:   42 RMIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGDALDALGLVRYCCRRMLMTHVDLIEKLLNYNTLEKS 110          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|1162448316|ref|XP_020400636.1| (DNA-directed RNA polymerase II 8.2 kDa polypeptide isoform X1 [Zea mays] >gi|1142644631|gb|AQK39617.1| DNA-directed RNA polymerases II IV and V subunit 10 [Zea mays])

HSP 1 Score: 114.775 bits (286), Expect = 9.525e-31
Identity = 60/101 (59.41%), Postives = 70/101 (69.31%), Query Frame = 0

Query:   19 GGVDTPGGQ----QVFLHLPLVY----------RMIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAK 105
            G V  P GQ       LHLPL Y          +MIIPVRCFTCGKVIGNK+++Y++ L+ D+ EG ALD + L RYCCRRML+THVDLI KLLNYNTL K
Sbjct:   24 GFVRPPAGQPSKLDERLHLPLRYSSNDTAAAAAKMIIPVRCFTCGKVIGNKWDLYLDLLQADYSEGDALDALELFRYCCRRMLMTHVDLIEKLLNYNTLEK 124          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|1072225956|gb|OEU10700.1| (DNA-directed RNA polymerases I, II, and III subunit rpabc5 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 112.849 bits (281), Expect = 1.494e-30
Identity = 51/66 (77.27%), Postives = 57/66 (86.36%), Query Frame = 0

Query:   39 MIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLA 104
            MIIPVRCFTCGKVI NK+E Y+  L+ DF EG ALD++GLKRYCCRRM+LTHVDLI KLLNYNT A
Sbjct:    1 MIIPVRCFTCGKVIANKWETYLSLLQADFSEGDALDELGLKRYCCRRMMLTHVDLIEKLLNYNTEA 66          

BLAST of EWM26536.1 vs. NCBI_GenBank
Match: gi|926798463|ref|XP_013906655.1| (DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Monoraphidium neglectum] >gi|761977948|gb|KIZ07636.1| DNA-directed RNA polymerases I, II, and III subunit RPABC5 [Monoraphidium neglectum])

HSP 1 Score: 112.849 bits (281), Expect = 1.503e-30
Identity = 50/69 (72.46%), Postives = 59/69 (85.51%), Query Frame = 0

Query:   39 MIIPVRCFTCGKVIGNKYEVYVEYLKNDFKEGVALDKVGLKRYCCRRMLLTHVDLISKLLNYNTLAKAG 107
            MIIPVRCFTCGKVIGNK++ Y++ L+ D+ EG ALD + L RYCCRRML+THVDLI KLLNYNTL +AG
Sbjct:    1 MIIPVRCFTCGKVIGNKWDTYLDLLQADYTEGEALDALNLNRYCCRRMLMTHVDLIEKLLNYNTLERAG 69