rna4149, rna4149 (mRNA) Nannochloropsis gaditana

Overview
Namerna4149
Unique Namerna4149
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1124
Alignment locationCM002462.1:983576..985486 -

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Properties
Property NameValue
Productinhibitor of growth ing4
Orig transcript idgnl|cribi|Naga_100141g13.8370.mrna
Orig protein idgnl|cribi|Naga_100141g13.8370
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:983576..985486 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100141g13gene3993Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna4149rna4149-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM26523.1cds4139Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna4149 ID=rna4149|Name=rna4149|organism=Nannochloropsis gaditana|type=mRNA|length=1124bp
CGTACTCATCGACCACGAACGCCTCCAAACTATGCACAAAAAAGGTTGAC
GATGCGTCACTTTCTGGCAATTACGGCGCCAATCGTACTTCTTGTCCAGA
TGACCATGGCTTTCCGACCGACTGCACGGTCTCGCGTGCAAATGCTGTGG
GGGAGTCAAACCAAGAAGCCTGTTACCATCGGGGGTCCCATCAACGAACC
AAAGCCTTTTTCTGTCCGCCCAGACAAATTCTTGGACGTCGCCACGGCAA
GCGCAGTCAGCTTATTGCGTGGTGGATCCGGTGCTTTTGTGCAAGGCTAC
AAAGTCGAGCTGGTGGGGACAGAGGAGGTGGACGCGGGGGACTACACTTT
TGTCTCAGTGGGCGGCAAGCGGAGCAAGGAGACCTGTGCGGCTTTTGTGG
GCCGACCCAAGCAACCCATCATTCTTTACGAATTTCAGGGATGCCCCTTT
TGTGCCAAAGTTCGGGAGGCTGTCAGCATTCTAGATCTGGACGTATTGTT
CTATCCTTGCCCGAAAGATGGGAAGAAGTTCCGCCCCGCTGCCGTCGCCC
GCGGAGGGAAAAGCCAGTTTCCTTACATGGTGGATCCAAACACCAAAGTG
GAAATGTACGAGTCGGGTGACATAATCCAGTATTTGGTCGATAACTATGG
CACGGGAGAGACGCCCGCCGGCCTAGGCGCCGGGTATGCAAACGTGGTGA
AGATTGGACTCGCCCTGGCCCCGCGCATTGGGAAGGGGAGCAAGGTCGTG
GCAGGTGGGAGCAACATTCCGCAGAAACCCTTGATTTATTGGGGGTACGA
GGCCTCTCCTTTCTGCCGACTGGTCAAGGAGAAATTGAACGAGCTGGAGC
TGCCCCACGTGCAAAAGTCCTGCGCGAGGGGGAGCAGCAAGCGCAGGGAG
CTGCAAGCGCGTGCTGGGAAATTTTTGGTGCCCTTCATCGAGGACCCCAA
CACGGGTGTGAGCATGTTTGAGAGCGCGGAGATCATGGAATACCTGACCA
AGACCTACGCTGTTTGAGGGGAAAAGGGAAAGGGGGGAGAGGAAAGGTAT
AGGCGTAGAGAGAATGTTTTTGACTGGCGGGATGGGGACTGGCATCGAGA
AAGCAACAAGTGCTGTGCAAGAGG
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protein sequence of rna4149

>rna4149-protein ID=rna4149-protein|Name=rna4149|organism=Nannochloropsis gaditana|type=polypeptide|length=436bp
MIGPGYLKDNLEHGAPLPERLKETFHLLRELDVATRLLTTRADRLIGASD
GLPEENGVHEEEDAEDDDEDYGVEREEEDEEEEDEEEEEEEEEEGEEEGE
EEEEEEDIGRGNSRGGNRCTRNGGQNSGRKVAAWKEEERRGGRGREKRER
EVSHGRLRGRRVPEEEEEEEVEEEEEEEEEEQEEEEEVEEEEEEEEEEID
GSGTCLASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFER
HYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRR
RGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGALMVGGGPGV
DVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRW
LCPKCKRDAGWKGRGSLGSSTAAAVLGLLEEKKKGY
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mRNA from alignment at CM002462.1:983576..985486-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna4149 ID=rna4149|Name=rna4149|organism=Nannochloropsis gaditana|type=mRNA|length=1911bp|location=Sequence derived from alignment at CM002462.1:983576..985486- (Nannochloropsis gaditana)
ACAGAATGATTGGTCCAGGGTATCTGAAAGATAATTTAGAGCATGGGGCG CCACTACCGGAAAGGTAAGTGTCACACAAATATTCTTTTTGCCCATTCAC CTTCAGAGCGTGCTAGCAAAGCGAGCTGCTCACTTAAGCCTCCAGTGCCC TGGAGTGTATTCATGATCTTGGGCTGAGGAAGGTTATGTTCGTTTTTTGC TCCATAAAAGAGGTAGATTTTATTGTAACAAGATGATGCGGACGAGTGCG TGGATTCCTCTCTCTTCCCGTGATCTTACACCCTATCCTATCTACGCGTG CCCTTCCCTCACGTTACACACGCTCGGAGGCCAAAGGATAACATGCACGA TTAATCGTCACTTCTCCTCCCTAATTTCAAAAAAATGTCACTCACTGCAC AGGCTGAAAGAAACGTTCCACCTCCTTCGTGAGCTAGACGTGGCCACAAG GCTCCTGACAACACGGGCCGACCGCCTCATCGGCGCCTCTGACGGCCTCC CTGAGGAGAACGGAGTGCATGAAGAGGAGGACGCCGAGGATGATGATGAG GACTATGGGGTAGAGAGGGAGGAAGAGGATGAAGAAGAAGAAGATGAGGA GGAAGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAAGGGGAGGAAGAAG AGGAAGAAGAGGACATTGGACGCGGGAATAGTAGAGGGGGAAATCGATGT ACAAGGAATGGAGGGCAAAACTCGGGTCGAAAAGTCGCAGCTTGGAAGGA GGAAGAACGGAGAGGAGGGAGAGGGAGGGAAAAAAGGGAGCGAGAAGTCT CCCATGGCCGTCTACGGGGCAGGAGAGTACCGGAGGAGGAGGAGGAGGAA GAGGTAGAGGAGGAGGAAGAAGAAGAAGAAGAGGAGCAGGAGGAGGAAGA AGAGGTAGAGGAGGAGGAGGAAGAAGAAGAGGAGGAAATAGACGGTTCAG GGACCTGTCTGGCCTCTTTGCGCGAACTCCAACATGCGGCCTTGCGTTGC GCCGACGAGAAGATTGCCCTCGCCATCCACGCCTACGACCTGCTGGACAC CCAGATTCGGCATTTGGACTCCGACATTCGGCGTTTCGAGCGGCATTACG GCTACGTCCCTCCCATGGTGGAGGAGGCCGCTCGGCGGGCGGAGGAGCAG CAGCAACAGGCGCCAGGGGGGAACGGTCACGTGGAAGAATGGTACAGGGG CCGCCGCAAGAGGAGGACGGGGGCGAGGGGCGCGAAGAGAAGGAGGGGAA GTATGAACGGTGAAGCCACCACGGGCGGGGCCGGAAACCCAGTGTCGCTG GTTGGCCCAGGCGGGGGGCAAGGAGGGGGAGGGGGAGGGGGAGGGGGAGG GGGGGAGGGAGGGGCACTGATGGTTGGGGGCGGTCCTGGCGTGGACGTGG ACCCGAACGAGCCCATCTACTGCTTCTGTCGGAACATTGCCTACGGGGAG ATGATTGGCTGCGACAACCCCAACTGCCAGTACGAATGGTTCCACTACAA GTGCGTGGGCCTGACGCGTCAACCCACCGCCCGGAACCGATGGTTGTGCC CCAAGTGTAAGAGGGACGCGGGCTGGAAGGGTAGGGGCTCCCTGGGGTCG TCGACCGCGGCGGCGGTGTTGGGTCTGCTGGAGGAGAAGAAGAAAGGGTA TTGAGGGCGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAAGGAGGGCTGTA CAGCGGAGCGAGGACGCGGAGCATTTTACGGGCAAGGCTGGCTTGAACGC GAACATTTTTGGGAGGAATGGGGAGCTACCGTATGTGAATCTTGAACAGA AGGGCGGCTACATATACATATACATACGACATGCATTGGGTGACACAAAA CGCGGAAGTCATGGAACAGAAAAGCCATTGACCTCCACCCACGGAGGGAG TTGGCAGGGAC
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Coding sequence (CDS) from alignment at CM002462.1:983576..985486-

>rna4149 ID=rna4149|Name=rna4149|organism=Nannochloropsis gaditana|type=CDS|length=2622bp|location=Sequence derived from alignment at CM002462.1:983576..985486- (Nannochloropsis gaditana)
GCTGAAAGAAACGTTCCACCTCCTTCGTGAGCTAGACGTGGCCACAAGGC
TCCTGACAACACGGGCCGACCGCCTCATCGGCGCCTCTGACGGCCTCCCT
GAGGAGAACGGAGTGCATGAAGAGGAGGACGCCGAGGATGATGATGAGGA
CTATGGGGTAGAGAGGGAGGAAGAGGATGAAGAAGAAGAAGATGAGGAGG
AAGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAAGGGGAGGAAGAAGAG
GAAGAAGAGGACATTGGACGCGGGAATAGTAGAGGGGGAAATCGATGTAC
AAGGAATGGAGGGCAAAACTCGGGTCGAAAAGTCGCAGCTTGGAAGGAGG
AAGAACGGAGAGGAGGGAGAGGGAGGGAAAAAAGGGAGCGAGAAGTCTCC
CATGGCCGTCTACGGGGCAGGAGAGTACCGGAGGAGGAGGAGGAGGAAGA
GGTAGAGGAGGAGGAAGAAGAAGAAGAAGAGGAGCAGGAGGAGGAAGAAG
AGGTAGAGGAGGAGGAGGAAGAAGAAGAGGAGGAAATAGACGGTTCAGGG
ACCTGTCTGGCCTCTTTGCGCGAACTCCAACATGCGGCCTTGCGTTGCGC
CGACGAGAAGATTGCCCTCGCCATCCACGCCTACGACCTGCTGGACACCC
AGATTCGGCATTTGGACTCCGACATTCGGCGTTTCGAGCGGCATTACGGC
TACGTCCCTCCCATGGTGGAGGAGGCCGCTCGGCGGGCGGAGGAGCAGCA
GCAACAGGCGCCAGGGGGGAACGGTCACGTGGAAGAATGGTACAGGGGCC
GCCGCAAGAGGAGGACGGGGGCGAGGGGCGCGAAGAGAAGGAGGGGAAGT
ATGAACGGTGAAGCCACCACGGGCGGGGCCGGAAACCCAGTGTCGCTGGT
TGGCCCAGGCGGGGGGCAAGGAGGGGGAGGGGGAGGGGGAGGGGGAGGGG
GGGAGGGAGGGGCACTGATGGTTGGGGGCGGTCCTGGCGTGGACGTGGAC
CCGAACGAGCCCATCTACTGCTTCTGTCGGAACATTGCCTACGGGGAGAT
GATTGGCTGCGACAACCCCAACTGCCAGTACGAATGGTTCCACTACAAGT
GCGTGGGCCTGACGCGTCAACCCACCGCCCGGAACCGATGGTTGTGCCCC
AAGTGTAAGAGGGACGCGGGCTGGAAGGGTAGGGGCTCCCTGGGGTCGTC
GACCGCGGCGGCGGTGTTGGGTCTGCTGGAGGAGAAGAAGAAAGGGTATT
GAATGATTGGTCCAGGGTATCTGAAAGATAATTTAGAGCATGGGGCGCCA
CTACCGGAAAGGCTGAAAGAAACGTTCCACCTCCTTCGTGAGCTAGACGT
GGCCACAAGGCTCCTGACAACACGGGCCGACCGCCTCATCGGCGCCTCTG
ACGGCCTCCCTGAGGAGAACGGAGTGCATGAAGAGGAGGACGCCGAGGAT
GATGATGAGGACTATGGGGTAGAGAGGGAGGAAGAGGATGAAGAAGAAGA
AGATGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAAGGGG
AGGAAGAAGAGGAAGAAGAGGACATTGGACGCGGGAATAGTAGAGGGGGA
AATCGATGTACAAGGAATGGAGGGCAAAACTCGGGTCGAAAAGTCGCAGC
TTGGAAGGAGGAAGAACGGAGAGGAGGGAGAGGGAGGGAAAAAAGGGAGC
GAGAAGTCTCCCATGGCCGTCTACGGGGCAGGAGAGTACCGGAGGAGGAG
GAGGAGGAAGAGGTAGAGGAGGAGGAAGAAGAAGAAGAAGAGGAGCAGGA
GGAGGAAGAAGAGGTAGAGGAGGAGGAGGAAGAAGAAGAGGAGGAAATAG
ACGGTTCAGGGACCTGTCTGGCCTCTTTGCGCGAACTCCAACATGCGGCC
TTGCGTTGCGCCGACGAGAAGATTGCCCTCGCCATCCACGCCTACGACCT
GCTGGACACCCAGATTCGGCATTTGGACTCCGACATTCGGCGTTTCGAGC
GGCATTACGGCTACGTCCCTCCCATGGTGGAGGAGGCCGCTCGGCGGGCG
GAGGAGCAGCAGCAACAGGCGCCAGGGGGGAACGGTCACGTGGAAGAATG
GTACAGGGGCCGCCGCAAGAGGAGGACGGGGGCGAGGGGCGCGAAGAGAA
GGAGGGGAAGTATGAACGGTGAAGCCACCACGGGCGGGGCCGGAAACCCA
GTGTCGCTGGTTGGCCCAGGCGGGGGGCAAGGAGGGGGAGGGGGAGGGGG
AGGGGGAGGGGGGGAGGGAGGGGCACTGATGGTTGGGGGCGGTCCTGGCG
TGGACGTGGACCCGAACGAGCCCATCTACTGCTTCTGTCGGAACATTGCC
TACGGGGAGATGATTGGCTGCGACAACCCCAACTGCCAGTACGAATGGTT
CCACTACAAGTGCGTGGGCCTGACGCGTCAACCCACCGCCCGGAACCGAT
GGTTGTGCCCCAAGTGTAAGAGGGACGCGGGCTGGAAGGGTAGGGGCTCC
CTGGGGTCGTCGACCGCGGCGGCGGTGTTGGGTCTGCTGGAGGAGAAGAA
GAAAGGGTATTGAATGATTGGTCCAGGGTATCTGAAAGATAATTTAGAGC
ATGGGGCGCCACTACCGGAAAG
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Synonyms
Publications