EWM26523.1, cds4139 (CDS) Nannochloropsis gaditana

Overview
NameEWM26523.1
Unique Namecds4139
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:985423..985481 -
Alignment locationCM002462.1:983833..985084 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM26523.1
Productinhibitor of growth ing4
Orig transcript idgnl|cribi|Naga_100141g13.8370.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:985423..985481 -
CM002462.1supercontigCM002462.1:983833..985084 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
IPR019786Zinc_finger_PHD-type_CS
IPR028651ING_fam
IPR013083Znf_RING/FYVE/PHD
IPR024610ING_N
IPR019787Znf_PHD-finger
IPR001965Znf_PHD
Homology
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|585108601|gb|EWM26523.1| (inhibitor of growth ing4 [Nannochloropsis gaditana])

HSP 1 Score: 847.425 bits (2188), Expect = 0.000e+0
Identity = 436/436 (100.00%), Postives = 436/436 (100.00%), Query Frame = 0
Query:    1 MIGPGYLKDNLEHGAPLPERLKETFHLLRELDVATRLLTTRADRLIGASDGLPEENGVHEEEDAEDDDEDYGVEREEEDEEEEDEEEEEEEEEEGEEEGEEEEEEEDIGRGNSRGGNRCTRNGGQNSGRKVAAWKEEERRGGRGREKREREVSHGRLRGRRVPEEEEEEEVEEEEEEEEEEQEEEEEVEEEEEEEEEEIDGSGTCLASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGALMVGGGPGVDVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRDAGWKGRGSLGSSTAAAVLGLLEEKKKGY 436
            MIGPGYLKDNLEHGAPLPERLKETFHLLRELDVATRLLTTRADRLIGASDGLPEENGVHEEEDAEDDDEDYGVEREEEDEEEEDEEEEEEEEEEGEEEGEEEEEEEDIGRGNSRGGNRCTRNGGQNSGRKVAAWKEEERRGGRGREKREREVSHGRLRGRRVPEEEEEEEVEEEEEEEEEEQEEEEEVEEEEEEEEEEIDGSGTCLASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGALMVGGGPGVDVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRDAGWKGRGSLGSSTAAAVLGLLEEKKKGY
Sbjct:    1 MIGPGYLKDNLEHGAPLPERLKETFHLLRELDVATRLLTTRADRLIGASDGLPEENGVHEEEDAEDDDEDYGVEREEEDEEEEDEEEEEEEEEEGEEEGEEEEEEEDIGRGNSRGGNRCTRNGGQNSGRKVAAWKEEERRGGRGREKREREVSHGRLRGRRVPEEEEEEEVEEEEEEEEEEQEEEEEVEEEEEEEEEEIDGSGTCLASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGALMVGGGPGVDVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRDAGWKGRGSLGSSTAAAVLGLLEEKKKGY 436          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|189237225|ref|XP_001810464.1| (PREDICTED: inhibitor of growth protein 5 isoform X3 [Tribolium castaneum] >gi|1004400121|gb|KYB27625.1| Inhibitor of growth protein 4-like Protein [Tribolium castaneum])

HSP 1 Score: 143.665 bits (361), Expect = 3.102e-36
Identity = 79/218 (36.24%), Postives = 110/218 (50.46%), Query Frame = 0
Query:  206 LASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGALM---VGGGPGV------------DVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            L  ++ L + A    D+K+ LAI  Y+L+D  IR LD+D+ RFE         +++ A  +  Q + + G         +GR+K + G    K+R G+ + E +TG           G G  G  G   G G   AL    V   PG+             VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   65 LFKIQSLFNKAKEYGDDKVQLAIQTYELVDKHIRRLDNDLARFESE-------IQDKALNSRNQDEPSVGK--------KGRKKTKDGKTEKKKRPGNSSEEDSTGTVRGTKKKKQKGAGSTGNSGSTTGSGAKAALATDSVSVLPGLAGIAHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKP--KGKWYCPKCTQD 265          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|642922562|ref|XP_008193227.1| (PREDICTED: inhibitor of growth protein 5 isoform X1 [Tribolium castaneum] >gi|1004400122|gb|EFA03615.2| Inhibitor of growth protein 4-like Protein [Tribolium castaneum])

HSP 1 Score: 142.895 bits (359), Expect = 5.965e-36
Identity = 79/220 (35.91%), Postives = 110/220 (50.00%), Query Frame = 0
Query:  206 LASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGAL-----MVGGGPGV------------DVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            L  ++ L + A    D+K+ LAI  Y+L+D  IR LD+D+ RFE         +++ A  +  Q + + G         +GR+K + G    K+R G+ + E +TG           G G  G  G   G G   AL      V   PG+             VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   65 LFKIQSLFNKAKEYGDDKVQLAIQTYELVDKHIRRLDNDLARFESE-------IQDKALNSRNQDEPSVGK--------KGRKKTKDGKTEKKKRPGNSSEEDSTGTVRGTKKKKQKGAGSTGNSGSTTGSGAKAALGEATDSVSVLPGLAGIAHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKP--KGKWYCPKCTQD 267          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|642922564|ref|XP_008193228.1| (PREDICTED: inhibitor of growth protein 5 isoform X2 [Tribolium castaneum])

HSP 1 Score: 141.354 bits (355), Expect = 2.362e-35
Identity = 78/220 (35.45%), Postives = 109/220 (49.55%), Query Frame = 0
Query:  206 LASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGAL-----MVGGGPGV------------DVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            L  ++ L + A    D+K+ LAI  Y+L+D  IR LD+D+ RFE         +++ A  +  Q + + G         + R+K + G    K+R G+ + E +TG           G G  G  G   G G   AL      V   PG+             VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   65 LFKIQSLFNKAKEYGDDKVQLAIQTYELVDKHIRRLDNDLARFESE-------IQDKALNSRNQDEPSVG---------KSRKKTKDGKTEKKKRPGNSSEEDSTGTVRGTKKKKQKGAGSTGNSGSTTGSGAKAALGEATDSVSVLPGLAGIAHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKP--KGKWYCPKCTQD 266          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|1059424211|ref|XP_017784796.1| (PREDICTED: inhibitor of growth protein 5 isoform X2 [Nicrophorus vespilloides])

HSP 1 Score: 140.198 bits (352), Expect = 5.770e-35
Identity = 75/202 (37.13%), Postives = 105/202 (51.98%), Query Frame = 0
Query:  221 DEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGAL----------MVGGGPG----VDVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            D+K+ LAI  Y+L+D  IR LDSD+ RFE         +++ A  +  Q++ + G         +GR+K + G    K+R G+ + E +TG             G GG G  G   G   A+          +    PG    + VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   80 DDKVQLAIQTYELVDKHIRRLDSDLARFEAE-------IQDKALSSRNQEEASVGK--------KGRKKTKDGKGEKKKRSGNSSEEDSTGTIRGSKKKKQKNTGSGGNGANGLSNGAAAAIGEVVDTALQGIEFAHPGDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKP--KGKWYCPKCTQD 264          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|1059424209|ref|XP_017784794.1| (PREDICTED: inhibitor of growth protein 5 isoform X1 [Nicrophorus vespilloides])

HSP 1 Score: 140.198 bits (352), Expect = 6.573e-35
Identity = 75/202 (37.13%), Postives = 105/202 (51.98%), Query Frame = 0
Query:  221 DEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGAL----------MVGGGPG----VDVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            D+K+ LAI  Y+L+D  IR LDSD+ RFE         +++ A  +  Q++ + G         +GR+K + G    K+R G+ + E +TG             G GG G  G   G   A+          +    PG    + VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   86 DDKVQLAIQTYELVDKHIRRLDSDLARFEAE-------IQDKALSSRNQEEASVGK--------KGRKKTKDGKGEKKKRSGNSSEEDSTGTIRGSKKKKQKNTGSGGNGANGLSNGAAAAIGEVVDTALQGIEFAHPGDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKP--KGKWYCPKCTQD 270          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|668452016|gb|KFB41009.1| (AGAP009992-PA-like protein [Anopheles sinensis])

HSP 1 Score: 135.576 bits (340), Expect = 5.270e-33
Identity = 79/231 (34.20%), Postives = 109/231 (47.19%), Query Frame = 0
Query:  206 LASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRG-SMNGEATTGGAGNPVSLVGPGGGQGGGGGGGG-------------------------GGGEGGALMVGGGPGVD--VDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            L ++++L + A    D+K+ LAI  Y+L+D  IR LDSD+ RFE   G +      A  ++EE   +            +GR+K + G   AK++R  S   EA   G G P +     G     G G                              +GG         +D  VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   69 LQAIQDLFNKAKEYGDDKVQLAIQTYELVDKHIRRLDSDLARFE---GEIQDKTLNAREKSEENVTK------------KGRKKVKDGKNAAKKKRTHSSEDEARPAGNGGPSTSGTTSGATNSNGKGKNTKKQKVNQEKEGRKGQNKKNAENDDNAQDGGHSTPHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTIKP--KGKWFCPKCSQD 282          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|119114226|ref|XP_319132.3| (AGAP009992-PA [Anopheles gambiae str. PEST] >gi|116118315|gb|EAA14095.3| AGAP009992-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 132.109 bits (331), Expect = 6.481e-32
Identity = 76/208 (36.54%), Postives = 107/208 (51.44%), Query Frame = 0
Query:  206 LASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRR---RGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGALMVGGGPGVD--VDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            L  ++EL + A    D+K+ LAI  Y+L+D  IR LDSD+ RFE   G +      A  ++EE   +   G   V++     +K+RT +   + +    G +    T+ GA N          Q  G        +GG         +D  VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   69 LQGIQELFNKAKEYGDDKVQLAIQTYELVDKHIRRLDSDLARFE---GEIQDKTVNAREKSEENVTKK--GRKKVKDSKSTVKKKRTHSSEDEAKPAGNGGVANSGTSSGAANSNGKGKNTKKQKKGVENDDAAQDGGHSTPHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKP--KGKWFCPKCSQD 269          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|1000739411|ref|XP_015592278.1| (PREDICTED: inhibitor of growth protein 5 [Cephus cinctus])

HSP 1 Score: 130.183 bits (326), Expect = 2.361e-31
Identity = 75/207 (36.23%), Postives = 106/207 (51.21%), Query Frame = 0
Query:  206 LASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGALMVGGGPG----VDVDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            L+ ++ L + A    D+K+ LAI  Y+L+D  IR LDSD+ RFE         ++E A  +   Q+++   +    +  + + KR+ G  GA     S N        G+  S          G  G G   +  AL   G P     + VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   65 LSHIQSLFNKAKEYGDDKVQLAIQTYELVDKHIRRLDSDLARFEAE-------IQEKASNSNRAQEES-NASKKGRKKLKEKEKRKKGTTGASSEDESKNARKKQKKGGSVTS------AAATGAVGSGAQADTSAL---GHPADVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKP--KGKWYCPKCTQD 252          
BLAST of EWM26523.1 vs. NCBI_GenBank
Match: gi|1133440138|ref|XP_019876444.1| (PREDICTED: LOW QUALITY PROTEIN: inhibitor of growth protein 5-like [Aethina tumida])

HSP 1 Score: 130.183 bits (326), Expect = 2.613e-31
Identity = 73/229 (31.88%), Postives = 116/229 (50.66%), Query Frame = 0
Query:  192 EEEEEEEIDGSGTCLASLRELQHAALRCADEKIALAIHAYDLLDTQIRHLDSDIRRFERHYGYVPPMVEEAARRAEEQQQQAPGGNGHVEEWYRGRRKRRTGARGAKRRRGSMNGEATTGGAGNPVSLVGPGGGQGGGGGGGGGGGEGGAL---MVGGGPGVD---------VDPNEPIYCFCRNIAYGEMIGCDNPNCQYEWFHYKCVGLTRQPTARNRWLCPKCKRD 408
            +E+++E++D        +++L + A    D+K+ LAI  Y+L+D  IR LD+D+ RFE         +++ A+ +  Q + +           +GR+K + G    K+R G+ + E +TG            G           G +  ++   +    PG+          VDPNEP YC C  ++YGEMIGCDNP+C  EWFH+ CVGLT +P  + +W CPKC +D
Sbjct:   58 DEQKKEQLD-------KIQKLFNKAKEYGDDKVQLAIQTYELVDKHIRRLDNDLARFESE-------IQDKAQNSRNQDEASLIK--------KGRKKPKDGKTEKKKRSGNSSEEDSTGATKGGKKKKQKSGPGNAITNSVASGAKTASVADVVASVLPGLTHPSDVLDMPVDPNEPTYCLCHQVSYGEMIGCDNPDCPIEWFHFACVGLTTKP--KGKWYCPKCVQD 262          
The following BLAST results are available for this feature:
BLAST of EWM26523.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585108601|gb|EWM26523.1|0.000e+0100.00inhibitor of growth ing4 [Nannochloropsis gaditana... [more]
gi|189237225|ref|XP_001810464.1|3.102e-3636.24PREDICTED: inhibitor of growth protein 5 isoform X... [more]
gi|642922562|ref|XP_008193227.1|5.965e-3635.91PREDICTED: inhibitor of growth protein 5 isoform X... [more]
gi|642922564|ref|XP_008193228.1|2.362e-3535.45PREDICTED: inhibitor of growth protein 5 isoform X... [more]
gi|1059424211|ref|XP_017784796.1|5.770e-3537.13PREDICTED: inhibitor of growth protein 5 isoform X... [more]
gi|1059424209|ref|XP_017784794.1|6.573e-3537.13PREDICTED: inhibitor of growth protein 5 isoform X... [more]
gi|668452016|gb|KFB41009.1|5.270e-3334.20AGAP009992-PA-like protein [Anopheles sinensis][more]
gi|119114226|ref|XP_319132.3|6.481e-3236.54AGAP009992-PA [Anopheles gambiae str. PEST] >gi|11... [more]
gi|1000739411|ref|XP_015592278.1|2.361e-3136.23PREDICTED: inhibitor of growth protein 5 [Cephus c... [more]
gi|1133440138|ref|XP_019876444.1|2.613e-3131.88PREDICTED: LOW QUALITY PROTEIN: inhibitor of growt... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4149rna4149Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications