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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100409g7.8439.mrna |
| Orig protein id | gnl|cribi|Naga_100409g7.8439 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:969902..971079 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4140 ID=rna4140|Name=rna4140|organism=Nannochloropsis gaditana|type=mRNA|length=684bp
ATGTCGTGTTCGTTTCAAAGAATGGAACCTGAAGAAAGCGACAGTGCACA
ACTTGAAGGGGGGAGGACGGGCATTGGCCCGGTGCCATGCGAGTGCAGCC
CTTCCTCAAACCCATCCGTCACCGCCCCTCCGCACGACTTGCACCGCCAA
AACACCGAACCAGACAAAGTGACGCAGGCGGCCATTCTGGACAAGTGCGA
CTCGACAGGCCGTCAACTTACTGCCCTCCCTCAACCTGACGCGGTGCCTG
ACCCTACTACCCCGTTGCCCTCCTTCCCCCCCCACCCGAAATCCCCTCCC
ACCTTCCCTCCGTCCGCTGGTCCCGACGCTTCTCCAGCCGCTTCCAGTCC
TGTTGCCCTCGAAATTCAACGCTGCCGCGGCCCTTCCTTGAGTGTGGCGC
AGATGAAAGAGCGCTGGCGAGGCTCCCGCCAAAAAATCGAAACCAGAGCC
CAGGCAATGGCCCGGTGGTCCGAGGAGGAAGAGAAGTACCGGCAAGCCTG
CTCTGAGGCGAAGGAGATGCTCACCCACCCCCACTTGGAAGCAGCGGCCC
TGGAACTGTACCATCAGCGCCTGCAAGGAACCTACCGGGGGGGCCTGTCC
GGGCCCCGCCTCCCGACGTCTTCTCCGGCGAGTCGCACGGGGATTTCCTG
GCCCGCTACCGGTCTCCTCGAGCCACGACGGTAA back to topprotein sequence of rna4140 >rna4140-protein ID=rna4140-protein|Name=rna4140|organism=Nannochloropsis gaditana|type=polypeptide|length=209bp
MEHGGMVHTGDAMSPPPPCRHCFWGHVMPGSYLLFRAFLLLLEALSIQQP
GRFRPRTQARLRAYSSLLAGPLLALGEGLTHKAWHGANVQHFSIYSLIFL
DGLVSWYCLLSHPERGRKGRGWPVALLGVWEGGVSACVGYQMVSHFHGGI
LITSMHALMSPLLTLVGTLLLVDRVLMGREGGQRREGVKLAAAVGMAWVG
CWAGWRGTR back to topmRNA from alignment at CM002462.1:969902..971079+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4140 ID=rna4140|Name=rna4140|organism=Nannochloropsis gaditana|type=mRNA|length=1178bp|location=Sequence derived from alignment at CM002462.1:969902..971079+ (Nannochloropsis gaditana)
ATGGAACATGGCGGCATGGTGGTAAGTAAGACGTCAgcgagggcagagga
gggacgtGCCACACATGTGGCTAATGTGCTCCATGtccagggaggaaagt
gacggTTCACGCGTGGTGAGAGTGGCATGATGTGCTGTAGCATGCGATGG
TGGTCGCCTTGGTGGTTTTGGTATTGTGCCTGTGTGCGTCAGAGTGGATG
GATCGTGCTGTGACATTCGATATATCGAGCCCAGAGGGGATGTTCCGATT
TCAGAAAAGGTGGCGGGCCTTGCGCAGGCGTGGCACTCTGAAAACATCGT
CATGTTTTTTGACACCCTTGAGAGTTTATGGCCGTCACGCAGTCGGTGCG
CCACATCagacctttccccccgccttaGAATCCTGActctcgtccccccc
ctgcccatGGGGACAGagctacctccccctcctcagtccttcctccccct
ccatccctctcccctaTGTACTCCGCACAAACAGCACACTGGCGATGCCA
TGAgccccccgccaccctgcCGGCACTGCTTCTGGGGCCACGTCATGCCG
GGGAgctacctcctcttccgcgctttcctcctcctcctggaagCCCTCTC
CATCCAACAACCGGGACGCTTCCGGCCCCGCACCCAAGCTCGCCTTCGTG
CCTACAGCAGCCTCCTTGCGGGCCCCTTGCTCGCCTTGGGGGAAGGGCTG
ACTCACAAAGCCTGGCATGGAGCCAATGTACAGCATTTTAGCATTTATTC
GTTGATTTTTTTGGACGGGCTGGTATCTTGGTATTGCCTCCTGTCCCACc
cagagagggggaggaaaggcagaggCTGGCCGGTTGCCCTGCTGGGCgtg
tgggaaggcggggttTCAGCTTGTGTTGGGTACCAGATGGTCTCGCATTT
TCACGGCGGCATCCTCATCACCTCCATGCACGCGCTCATGTCACCCTTGC
TGACCCTGGTGGGCACCCTCCTGCTCGTGGATCGGGTcctgatggggagg
gagggcgggcagagaCGGGAAGGGGTGaagctggcggcggcggtggggaT
GGCGTGGGTGGGCTGTTGGTTTGGCCTCATTGGGCCGGGTTTTTGGAtgt
atggagggagggaggggtggttgGGGACTGCcagggacgagggcgggggg
cagggcgggatggaggggcacgAGGTGA back to topCoding sequence (CDS) from alignment at CM002462.1:969902..971079+ >rna4140 ID=rna4140|Name=rna4140|organism=Nannochloropsis gaditana|type=CDS|length=1890bp|location=Sequence derived from alignment at CM002462.1:969902..971079+ (Nannochloropsis gaditana)
ATGGAACATGGCGGCATGGTGCACACTGGCGATGCCATGAgccccccgcc
accctgcCGGCACTGCTTCTGGGGCCACGTCATGCCGGGGAgctacctcc
tcttccgcgctttcctcctcctcctggaagCCCTCTCCATCCAACAACCG
GGACGCTTCCGGCCCCGCACCCAAGCTCGCCTTCGTGCCTACAGCAGCCT
CCTTGCGGGCCCCTTGCTCGCCTTGGGGGAAGGGCTGACTCACAAAGCCT
GGCATGGAGCCAATGTACAGCATTTTAGCATTTATTCGTTGATTTTTTTG
GACGGGCTGGTATCTTGGTATTGCCTCCTGTCCCACccagagagggggag
gaaaggcagaggCTGGCCGGTTGCCCTGCTGGGCgtgtgggaaggcgggg
ttTCAGCTTGTGTTGGGTACCAGATGGTCTCGCATTTTCACGGCGGCATC
CTCATCACCTCCATGCACGCGCTCATGTCACCCTTGCTGACCCTGGTGGG
CACCCTCCTGCTCGTGGATCGGGTcctgatggggagggagggcgggcaga
gaCGGGAAGGGGTGaagctggcggcggcggtggggaTGGCGTGGGTGGGC
TGTTGggcgggatggaggggcacgAGGTGAATGGAACATGGCGGCATGGT
GCACACTGGCGATGCCATGAgccccccgccaccctgcCGGCACTGCTTCT
GGGGCCACGTCATGCCGGGGAgctacctcctcttccgcgctttcctcctc
ctcctggaagCCCTCTCCATCCAACAACCGGGACGCTTCCGGCCCCGCAC
CCAAGCTCGCCTTCGTGCCTACAGCAGCCTCCTTGCGGGCCCCTTGCTCG
CCTTGGGGGAAGGGCTGACTCACAAAGCCTGGCATGGAGCCAATGTACAG
CATTTTAGCATTTATTCGTTGATTTTTTTGGACGGGCTGGTATCTTGGTA
TTGCCTCCTGTCCCACccagagagggggaggaaaggcagaggCTGGCCGG
TTGCCCTGCTGGGCgtgtgggaaggcggggttTCAGCTTGTGTTGGGTAC
CAGATGGTCTCGCATTTTCACGGCGGCATCCTCATCACCTCCATGCACGC
GCTCATGTCACCCTTGCTGACCCTGGTGGGCACCCTCCTGCTCGTGGATC
GGGTcctgatggggagggagggcgggcagagaCGGGAAGGGGTGaagctg
gcggcggcggtggggaTGGCGTGGGTGGGCTGTTGggcgggatggagggg
cacgAGGTGAATGGAACATGGCGGCATGGTGCACACTGGCGATGCCATGA
gccccccgccaccctgcCGGCACTGCTTCTGGGGCCACGTCATGCCGGGG
AgctacctcctcttccgcgctttcctcctcctcctggaagCCCTCTCCAT
CCAACAACCGGGACGCTTCCGGCCCCGCACCCAAGCTCGCCTTCGTGCCT
ACAGCAGCCTCCTTGCGGGCCCCTTGCTCGCCTTGGGGGAAGGGCTGACT
CACAAAGCCTGGCATGGAGCCAATGTACAGCATTTTAGCATTTATTCGTT
GATTTTTTTGGACGGGCTGGTATCTTGGTATTGCCTCCTGTCCCACccag
agagggggaggaaaggcagaggCTGGCCGGTTGCCCTGCTGGGCgtgtgg
gaaggcggggttTCAGCTTGTGTTGGGTACCAGATGGTCTCGCATTTTCA
CGGCGGCATCCTCATCACCTCCATGCACGCGCTCATGTCACCCTTGCTGA
CCCTGGTGGGCACCCTCCTGCTCGTGGATCGGGTcctgatggggagggag
ggcgggcagagaCGGGAAGGGGTGaagctggcggcggcggtggggaTGGC
GTGGGTGGGCTGTTGggcgggatggaggggcacgAGGTGA back to top
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