EWM26543.1, cds4130 (CDS) Nannochloropsis gaditana

Overview
NameEWM26543.1
Unique Namecds4130
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:969902..969922 +
Alignment locationCM002462.1:970386..970969 +
Alignment locationCM002462.1:971055..971079 +

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Properties
Property NameValue
Protein idEWM26543.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100409g7.8439.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:969902..969922 +
CM002462.1supercontigCM002462.1:970386..970969 +
CM002462.1supercontigCM002462.1:971055..971079 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
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BLAST of EWM26543.1 vs. NCBI_GenBank
Match: gi|585108626|gb|EWM26543.1| (hypothetical protein Naga_100409g7 [Nannochloropsis gaditana])

HSP 1 Score: 417.542 bits (1072), Expect = 1.300e-147
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0 
Query:    1 MEHGGMVHTGDAMSPPPPCRHCFWGHVMPGSYLLFRAFLLLLEALSIQQPGRFRPRTQARLRAYSSLLAGPLLALGEGLTHKAWHGANVQHFSIYSLIFLDGLVSWYCLLSHPERGRKGRGWPVALLGVWEGGVSACVGYQMVSHFHGGILITSMHALMSPLLTLVGTLLLVDRVLMGREGGQRREGVKLAAAVGMAWVGCWAGWRGTR 209
            MEHGGMVHTGDAMSPPPPCRHCFWGHVMPGSYLLFRAFLLLLEALSIQQPGRFRPRTQARLRAYSSLLAGPLLALGEGLTHKAWHGANVQHFSIYSLIFLDGLVSWYCLLSHPERGRKGRGWPVALLGVWEGGVSACVGYQMVSHFHGGILITSMHALMSPLLTLVGTLLLVDRVLMGREGGQRREGVKLAAAVGMAWVGCWAGWRGTR
Sbjct:    1 MEHGGMVHTGDAMSPPPPCRHCFWGHVMPGSYLLFRAFLLLLEALSIQQPGRFRPRTQARLRAYSSLLAGPLLALGEGLTHKAWHGANVQHFSIYSLIFLDGLVSWYCLLSHPERGRKGRGWPVALLGVWEGGVSACVGYQMVSHFHGGILITSMHALMSPLLTLVGTLLLVDRVLMGREGGQRREGVKLAAAVGMAWVGCWAGWRGTR 209
The following BLAST results are available for this feature:
BLAST of EWM26543.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108626|gb|EWM26543.1|1.300e-147100.00hypothetical protein Naga_100409g7 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4140rna4140Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications