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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100409g6.8442.mrna |
| Orig protein id | gnl|cribi|Naga_100409g6.8442 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:968481..969389 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4139 ID=rna4139|Name=rna4139|organism=Nannochloropsis gaditana|type=mRNA|length=1013bp
AAACGACGCTCAAGCAGCTCACATTCCGCCTCTATCATATCCATTCAAGC
TATAGGATACAGGGACAGTCATGTCGGGGGATTCTGCGTACAGCTTTTCA
TTGACGACCTTTTCCCGAACTGGAAAGCTCCTCCAAATCGAGTATGCGCT
AAGCGCTGCGCAACAGGGAAAAACTTCCTTAGGCATCCGCGCAACCAACG
GCGTCGTCATCGCCACTGAAAAAAAACTTCCTTCCGTCTTGATCGATGAA
GCGCACGTGCAGAAGATAGAACTCATCAACCCTTCCACGGGCTTCGTATT
TTCGGGCCTGGGACCCGACTACCGCGTCCTAGTTCGCAAAAGCCGCAAGC
GAGCACAATCTTATTTTTTGCAGTACCGGGAGCATCAGCCCGTAGGACAA
CTTGTGCGAGATACTGCCGGGGTCATGCAGGAATTTACGCAGTCGGGAGG
GGTGCGTCCCTTCGGACTTTCCCTATTGGTGGCCGGCTACGACGACAATG
GACCGCAGCTCTTTCAGGTCGACCCCTCGGGGGCGTACTTTGGCTGGCAA
GCCACAGCGATAGGGAAGAACCACGTGAACGCGAAGAACTTCTTGGAAAA
GCGTTACAACGAGGAGATGGAGCTGGACGACGCGGTCCACACGGCCCTCT
TGACTTTGAGAGAGGGCTTCGAAGGGGAGATGAATGAAAGCAACATCGAG
ATCGGTATCATTGGGGCGGACAGAAAGTTCCGCATCCTGACGCCAGCGGA
GGTGAAGGACTACTTGGACGAGGCGAACTAGAGGGAGAAGGAGGAGGGAA
AGGCAGGGGGGGGAGACCGGGTGGAGGGGATCGTGTGGAAAGGAAGGCTT
GGCAAGCTAAAGAACGAAGAACCGGGACAGAATCGAAGCCATTAAAAGCG
CCAATGCGTCCCGTATGCCCCGTCCACTCGAGACTCAAGGCTCTTGTGCC
CCCAGTCGACAGGATTATCTTTTTGGCCAAGTGTAGACAAGTACTTTACT
TGCTCCCCCCCTC back to topprotein sequence of rna4139 >rna4139-protein ID=rna4139-protein|Name=rna4139|organism=Nannochloropsis gaditana|type=polypeptide|length=227bp
MSCSFQRMEPEESDSAQLEGGRTGIGPVPCECSPSSNPSVTAPPHDLHRQ
NTEPDKVTQAAILDKCDSTGRQLTALPQPDAVPDPTTPLPSFPPHPKSPP
TFPPSAGPDASPAASSPVALEIQRCRGPSLSVAQMKERWRGSRQKIETRA
QAMARWSEEEEKYRQACSEAKEMLTHPHLEAAALELYHQRLQGTYRGGLS
GPRLPTSSPASRTGISWPATGLLEPRR back to topmRNA from alignment at CM002462.1:968481..969389- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4139 ID=rna4139|Name=rna4139|organism=Nannochloropsis gaditana|type=mRNA|length=909bp|location=Sequence derived from alignment at CM002462.1:968481..969389- (Nannochloropsis gaditana)
ATGTCGTGTTCGTTTCAAAGAATGGAACCTGAAGAAAGCGACAGTGCACA
ACTTGAAGGGGGGAGGACGGGCATTGGCCCGGTGCCATGCGAGGTGAGGG
GGAGGGTATTCCCTGTGTAATGGAATGGAGGACACAAATCGAAAACGATG
CGCCGTTCATCTAAGTTATCGACGGCCTTACTCCGGTGTTGTGCTCCGTT
TTCCCCCTGCCTTCCTTTTCCATCTCCCTCGCCCCTCCCTTACCTCCACC
CCAGCAGTGCAGCCCTTCCTCAAACCCATCCGTCACCGCCCCTCCGCACG
ACTTGCACCGCCAAAACACCGAACCAGACAAAGTGACGCAGGCGGCCATT
CTGGACAAGTGCGACTCGACAGGCCGTCAACTTACTGCCCTCCCTCAACC
TGACGCGGTGCCTGACCCTACTACCCCGTTGCCCTCCTTCCCCCCCCACC
CGAAATCCCCTCCCACCTTCCCTCCGTCCGCTGGTCCCGACGCTTCTCCA
GCCGCTTCCAGTCCTGTTGCCCTCGAAATTCAACGCTGCCGCGGCCCTTC
CTTGAGTGTGGCGCAGATGAAAGAGCGCTGGCGAGGCTCCCGCCAAAAAA
TCGAAACCAGAGCCCAGGCAATGGCCCGGTGGTCCGAGGAGGAAGAGAAG
TACCGGCAAGCCTGCTCTGAGGCGAAGGAGATGCTCACCCACCCCCACTT
GGAAGCAGCGGCCCTGGAACTGTACCATCAGCGCCTGCAAGGAACCTACC
GGGGGGGCCTGTCCGGTCGAGGCCCTCGTGTCGCCTTCCCGGAACCCGGG
TCCTCCCCTTCCCCCTCCCCGTCCAGGGCCCCGCCTCCCGACGTCTTCTC
CGGCGAGTCGCACGGGGATTTCCTGGCCCGCTACCGGTCTCCTCGAGCCA
CGACGGTAA back to topCoding sequence (CDS) from alignment at CM002462.1:968481..969389- >rna4139 ID=rna4139|Name=rna4139|organism=Nannochloropsis gaditana|type=CDS|length=2052bp|location=Sequence derived from alignment at CM002462.1:968481..969389- (Nannochloropsis gaditana)
GGCCCCGCCTCCCGACGTCTTCTCCGGCGAGTCGCACGGGGATTTCCTGG
CCCGCTACCGGTCTCCTCGAGCCACGACGGTAATGCAGCCCTTCCTCAAA
CCCATCCGTCACCGCCCCTCCGCACGACTTGCACCGCCAAAACACCGAAC
CAGACAAAGTGACGCAGGCGGCCATTCTGGACAAGTGCGACTCGACAGGC
CGTCAACTTACTGCCCTCCCTCAACCTGACGCGGTGCCTGACCCTACTAC
CCCGTTGCCCTCCTTCCCCCCCCACCCGAAATCCCCTCCCACCTTCCCTC
CGTCCGCTGGTCCCGACGCTTCTCCAGCCGCTTCCAGTCCTGTTGCCCTC
GAAATTCAACGCTGCCGCGGCCCTTCCTTGAGTGTGGCGCAGATGAAAGA
GCGCTGGCGAGGCTCCCGCCAAAAAATCGAAACCAGAGCCCAGGCAATGG
CCCGGTGGTCCGAGGAGGAAGAGAAGTACCGGCAAGCCTGCTCTGAGGCG
AAGGAGATGCTCACCCACCCCCACTTGGAAGCAGCGGCCCTGGAACTGTA
CCATCAGCGCCTGCAAGGAACCTACCGGGGGGGCCTGTCCGATGTCGTGT
TCGTTTCAAAGAATGGAACCTGAAGAAAGCGACAGTGCACAACTTGAAGG
GGGGAGGACGGGCATTGGCCCGGTGCCATGCGAGGGCCCCGCCTCCCGAC
GTCTTCTCCGGCGAGTCGCACGGGGATTTCCTGGCCCGCTACCGGTCTCC
TCGAGCCACGACGGTAATGCAGCCCTTCCTCAAACCCATCCGTCACCGCC
CCTCCGCACGACTTGCACCGCCAAAACACCGAACCAGACAAAGTGACGCA
GGCGGCCATTCTGGACAAGTGCGACTCGACAGGCCGTCAACTTACTGCCC
TCCCTCAACCTGACGCGGTGCCTGACCCTACTACCCCGTTGCCCTCCTTC
CCCCCCCACCCGAAATCCCCTCCCACCTTCCCTCCGTCCGCTGGTCCCGA
CGCTTCTCCAGCCGCTTCCAGTCCTGTTGCCCTCGAAATTCAACGCTGCC
GCGGCCCTTCCTTGAGTGTGGCGCAGATGAAAGAGCGCTGGCGAGGCTCC
CGCCAAAAAATCGAAACCAGAGCCCAGGCAATGGCCCGGTGGTCCGAGGA
GGAAGAGAAGTACCGGCAAGCCTGCTCTGAGGCGAAGGAGATGCTCACCC
ACCCCCACTTGGAAGCAGCGGCCCTGGAACTGTACCATCAGCGCCTGCAA
GGAACCTACCGGGGGGGCCTGTCCGATGTCGTGTTCGTTTCAAAGAATGG
AACCTGAAGAAAGCGACAGTGCACAACTTGAAGGGGGGAGGACGGGCATT
GGCCCGGTGCCATGCGAGGGCCCCGCCTCCCGACGTCTTCTCCGGCGAGT
CGCACGGGGATTTCCTGGCCCGCTACCGGTCTCCTCGAGCCACGACGGTA
ATGCAGCCCTTCCTCAAACCCATCCGTCACCGCCCCTCCGCACGACTTGC
ACCGCCAAAACACCGAACCAGACAAAGTGACGCAGGCGGCCATTCTGGAC
AAGTGCGACTCGACAGGCCGTCAACTTACTGCCCTCCCTCAACCTGACGC
GGTGCCTGACCCTACTACCCCGTTGCCCTCCTTCCCCCCCCACCCGAAAT
CCCCTCCCACCTTCCCTCCGTCCGCTGGTCCCGACGCTTCTCCAGCCGCT
TCCAGTCCTGTTGCCCTCGAAATTCAACGCTGCCGCGGCCCTTCCTTGAG
TGTGGCGCAGATGAAAGAGCGCTGGCGAGGCTCCCGCCAAAAAATCGAAA
CCAGAGCCCAGGCAATGGCCCGGTGGTCCGAGGAGGAAGAGAAGTACCGG
CAAGCCTGCTCTGAGGCGAAGGAGATGCTCACCCACCCCCACTTGGAAGC
AGCGGCCCTGGAACTGTACCATCAGCGCCTGCAAGGAACCTACCGGGGGG
GCCTGTCCGATGTCGTGTTCGTTTCAAAGAATGGAACCTGAAGAAAGCGA
CAGTGCACAACTTGAAGGGGGGAGGACGGGCATTGGCCCGGTGCCATGCG
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