EWM26546.1, cds4129 (CDS) Nannochloropsis gaditana

Overview
NameEWM26546.1
Unique Namecds4129
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:969297..969389 -
Alignment locationCM002462.1:968625..969132 -
Alignment locationCM002462.1:968481..968563 -

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Properties
Property NameValue
Protein idEWM26546.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100409g6.8442.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:969297..969389 -
CM002462.1supercontigCM002462.1:968625..969132 -
CM002462.1supercontigCM002462.1:968481..968563 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM26546.1 vs. NCBI_GenBank
Match: gi|585108629|gb|EWM26546.1| (hypothetical protein Naga_100409g6 [Nannochloropsis gaditana])

HSP 1 Score: 457.988 bits (1177), Expect = 6.811e-163
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0 
Query:    1 MSCSFQRMEPEESDSAQLEGGRTGIGPVPCECSPSSNPSVTAPPHDLHRQNTEPDKVTQAAILDKCDSTGRQLTALPQPDAVPDPTTPLPSFPPHPKSPPTFPPSAGPDASPAASSPVALEIQRCRGPSLSVAQMKERWRGSRQKIETRAQAMARWSEEEEKYRQACSEAKEMLTHPHLEAAALELYHQRLQGTYRGGLSGPRLPTSSPASRTGISWPATGLLEPRR 227
            MSCSFQRMEPEESDSAQLEGGRTGIGPVPCECSPSSNPSVTAPPHDLHRQNTEPDKVTQAAILDKCDSTGRQLTALPQPDAVPDPTTPLPSFPPHPKSPPTFPPSAGPDASPAASSPVALEIQRCRGPSLSVAQMKERWRGSRQKIETRAQAMARWSEEEEKYRQACSEAKEMLTHPHLEAAALELYHQRLQGTYRGGLSGPRLPTSSPASRTGISWPATGLLEPRR
Sbjct:    1 MSCSFQRMEPEESDSAQLEGGRTGIGPVPCECSPSSNPSVTAPPHDLHRQNTEPDKVTQAAILDKCDSTGRQLTALPQPDAVPDPTTPLPSFPPHPKSPPTFPPSAGPDASPAASSPVALEIQRCRGPSLSVAQMKERWRGSRQKIETRAQAMARWSEEEEKYRQACSEAKEMLTHPHLEAAALELYHQRLQGTYRGGLSGPRLPTSSPASRTGISWPATGLLEPRR 227
The following BLAST results are available for this feature:
BLAST of EWM26546.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108629|gb|EWM26546.1|6.811e-163100.00hypothetical protein Naga_100409g6 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna4139rna4139Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications