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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100421g2.10771.mrna |
| Orig protein id | gnl|cribi|Naga_100421g2.10771 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:883059..885270 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4113 ID=rna4113|Name=rna4113|organism=Nannochloropsis gaditana|type=mRNA|length=607bp
ATGAATCCCTTGGCTGACGAGGAGGGAGAGGGAAGGGAGGGAGACGAGAA
GGAGGGGAGGGAGGCGCCACAGGAGGAGGGGGAGGGGAGGGAGGAGGGAG
GGGGCAGGCGAGCGGAGGGAGGGGCTGGGCCGGGGGGGGATCGGAGAGGT
AGCACGGAGGGGGACGTGGGGAGTGATGAGAGTATTTACGGCAGGAAATT
GAGGGCAAGCCTTAGGAGAGCAGGGGATGAAGGAGATGGCGAGCCTGAGG
ATGCCATGGACGTGTACGTTTCGAGGGAGGAGCGCCCGGGTCGGCCTCGG
GCGTCAGGGAGGGGGGTCAGAGGGGAAGGGGTAGGACAGAATGTACGGTT
CCCCCCCGTGGTCCTGCGACCGGGTCGTACGGCAAGATTTGATTCATTCA
ATGGCGGTGGAAGGGGGGGAGACGTGAATGAAAGAGGGCATAGAGTGAGT
GCACAGGTGGCCAGAGGCAGGCGAGAGGAGGAGTTGATATGAGGTGGTGT
GTTGGCCGAGTGGGAGCGTGTCGAATGCGTCAAGATTGACCGGATAAGCA
ATCAATGAGTCAACGACTTATCAAGAAAGTGAATATTTCTGAAAGGACGC
ATGGACA back to topprotein sequence of rna4113 >rna4113-protein ID=rna4113-protein|Name=rna4113|organism=Nannochloropsis gaditana|type=polypeptide|length=641bp
MNVDRGYTPTVEESVLPKMIKPIDASDSGQPSLSPPHHSPLSAASPTRFP
LPPLTLKPLARSVSNPVITASSNAHRMSLVPRVPLRKGKWTPEEEMYAHY
IIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCP
CEATPDNLEASKRVSSRLAELEAAFKSKVDAPSVFHLPRHPTAPPTQPSG
RRQSPAGNGLPPASVPATGSELPRRASSSSLDGLRKGTEANVTDPSLALL
PAHAPGLLNGSGQAGPGQIAPLEPSLSSPEGSHCLPPPFLLVAPRPASTC
NRSARPRPRPVLPRSRCPPGIRPRICPWPCTGQRRRRKTRRRKGSRTEWH
PPCCCPPRLGEREGQGGRGKGGNRGADTRADRGRNYPEFGWSNDGEGGRR
PIPCLTDDHAAGDLLVNFFASVHRNHGGDAEGGAGPWPPGEGKGGTGERG
GEEKGNGRVLDGGTLPPAPSSVSRTADSLSVAATGTAVLAAASTSAAEEE
ATMAPGGSFCGKSEESSSAAASPLTPSCLSGAHPSPASSTSASLPSLSTP
DADPGHQGGGYSVADAPGMEPTSTVKREGEACGLAMREEKSGEGERQTPA
ALVWGQEGGRAGEREGFEAGLLDREEGPADPAKRQKMINSC back to topmRNA from alignment at CM002462.1:883059..885270+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4113 ID=rna4113|Name=rna4113|organism=Nannochloropsis gaditana|type=mRNA|length=2212bp|location=Sequence derived from alignment at CM002462.1:883059..885270+ (Nannochloropsis gaditana)
ATGAACGTCGACAGAGGCTACACACccacggtggaggaaagtgTCCTTCC
CAAAATGATCAAGCCCATCGATGCGTCGGATTCCGGTCAGCCTTCCTTGA
GCCCACCGCACCATTCGCCTTTGTCGGCGGCCTCCCCGACacgcttccct
cttccccccctcaccctcaAGCCTTTGGCGCGCTCAGTGTCTAATCCCGT
GATAACAGCGAGTAGCAATGCCCACCGGATGTCCTTGGTGCCTAGAGTTC
CCCTTcggaagggaaaatggacgcctgaggaggaaatgtACGCCCACTAC
ATCATCGATAATTTTAACAAGGGCCTCATCAGCCTCACTCGCGGTAGgtg
ggggaaatggaagagcaCGAATGAAATACCCTTCTTTGTGGCCTttcacc
tctctttccccccgtcGTCGATATATCTGATGTCTTGTTCGGTGTGCGTG
TCTGGCTCCGCGCTTGCTTcgacgagggggatggacgagTCGACGGAGGG
CTCCTGCCCGCCACCCAGGatgccttcgccttcccctctcgtGACGGTGA
GACTcaatgcctccttcctcctcttccaggcaCCACCCTCCGCTCCTACC
TCTCGGAGCGACTGAACTGCGACCCCATGCGGGTGACAAAGAAGTTCTCA
GGCACGTCCTGCATCGGCAAGAGTATCTTCTGTCCCTGCGAAGCCACGCC
GGACAATTTGGAAGCCAGCAAACGCGTCTCCTCCCGTCTGGccgagctgg
aggcggcTTTCAAGTCCAAAGTCGACGCTCCTTCCGTTTTTCACCTGCCG
CGGCaccccacggccccgccgACACAGCCCTCCGGTCGTCGCCAGTCCCC
TGCTGGGAACGGCCTGCCCCCAGCGTCGGTCCCCGCGACGGGCTCCGAGC
TCCCCAGGCGGGCTTCCTCAAGCTCGTTGGACGGGTTGCGAAAAGGGACA
GAGGCCAATGTCACGGACCCTTCTCTCGCCTTACTCCCGGCCCACGCGCC
CGGTCTCCTTAACGGGAGCGGACAGGCTGGTCCCGGTCAAATCGCACCCT
TGgagccctctctctcctcgccGGAGGGCTCCcactgtctccctcccccc
ttcctcctggtcgCACCAAGGcccgccagcacctgcaACCgttccgcccg
cccccgtccccgcccggtTTTGCCTCGTTCGAGATGCCCTCCAGGCATTC
GGCCCCGGATCTGTCCTTGGCCGTGTACGggtcagaggaggaggaggaag
acgaggaggaggaaggggtccaGGACGGAGTGGCACCCTCCCTGCtgttg
tcctcctcgcctcggggagcgggaaggtcagggagggcgtgggaaggggg
ggaaccgCGGCGCCGATACACGAGCGGACGTCGGCTCGGTCCTCGGCACG
GCCTCGCCTATTTGGAGGGCCGGGGCAAGCGGGGCAGAAACTACCCGGAG
TTTGGGTGGTCgaacgacggggagggggggcgacggCCTATCCCGTGTCT
GACGGACGACCACGCGGCCGGGGACTTGTTGGTGAACTTCTTCGCCTCCG
TGCACCGGAACCACgggggggacgcggagggcggggcagggccctggccg
ccgggggaaggcaagggcgggacgggggagagggggggggaggagaaggg
caacGGCAGGGTCTTGGACGGAGgtaccctcccccccgccccctcgtccG
TCAGCAGGACCGCCGACTCCCTGTCCGTCGCCGCCACCGGCACCGCCGTC
CTTGctgccgccagcacctcagccgcggaggaggaagcgactaTGGCTCC
GGGAGGGAGCTTTTGTgggaaaagcgaggaaagCTCGTCCGCCGCGGCCT
CGCCACTGAcgccctcctgtctctcGGGGGCGCATCCGTCCCCTGCGTCT
TCCACGTCGGcctcgctgccctccctgtccaccCCGGACGCGGACCCGGG
gcaccagggaggggggtacTCGGTGGCGGACGCCCCGGGGATGGAGCCCA
CGTCGAcggtcaagagggagggagaggcctgCGGCCTGGCCAtgagagaa
gagaagagcggagaaggagagcgacAGACCCCGGCGGCCTTGGTgtgggg
gcaggagggcgggagggcgggggagagggagggcttcgagGCGGGGTTGC
TGGACCGAGAGGAAGGACCTGCGGATCCAGCCAAACGGCAAAAGATGATC
AATAGCTGTTGA back to topCoding sequence (CDS) from alignment at CM002462.1:883059..885270+ >rna4113 ID=rna4113|Name=rna4113|organism=Nannochloropsis gaditana|type=CDS|length=5778bp|location=Sequence derived from alignment at CM002462.1:883059..885270+ (Nannochloropsis gaditana)
ATGAACGTCGACAGAGGCTACACACccacggtggaggaaagtgTCCTTCC
CAAAATGATCAAGCCCATCGATGCGTCGGATTCCGGTCAGCCTTCCTTGA
GCCCACCGCACCATTCGCCTTTGTCGGCGGCCTCCCCGACacgcttccct
cttccccccctcaccctcaAGCCTTTGGCGCGCTCAGTGTCTAATCCCGT
GATAACAGCGAGTAGCAATGCCCACCGGATGTCCTTGGTGCCTAGAGTTC
CCCTTcggaagggaaaatggacgcctgaggaggaaatgtACGCCCACTAC
ATCATCGATAATTTTAACAAGGGCCTCATCAGCCTCACTCGCGgcaCCAC
CCTCCGCTCCTACCTCTCGGAGCGACTGAACTGCGACCCCATGCGGGTGA
CAAAGAAGTTCTCAGGCACGTCCTGCATCGGCAAGAGTATCTTCTGTCCC
TGCGAAGCCACGCCGGACAATTTGGAAGCCAGCAAACGCGTCTCCTCCCG
TCTGGccgagctggaggcggcTTTCAAGTCCAAAGTCGACGCTCCTTCCG
TTTTTCACCTGCCGCGGCaccccacggccccgccgACACAGCCCTCCGGT
CGTCGCCAGTCCCCTGCTGGGAACGGCCTGCCCCCAGCGTCGGTCCCCGC
GACGGGCTCCGAGCTCCCCAGGCGGGCTTCCTCAAGCTCGTTGGACGGGT
TGCGAAAAGGGACAGAGGCCAATGTCACGGACCCTTCTCTCGCCTTACTC
CCGGCCCACGCGCCCGGTCTCCTTAACGGGAGCGGACAGGCTGGTCCCGG
TCAAATCGCACCCTTGgagccctctctctcctcgccGGAGGGCTCCcact
gtctccctccccccttcctcctggtcgCACCAAGGcccgccagcacctgc
aACCgttccgcccgcccccgtccccgcccggtTTTGCCTCGTTCGAGATG
CCCTCCAGGCATTCGGCCCCGGATCTGTCCTTGGCCGTGTACGggtcaga
ggaggaggaggaagacgaggaggaggaaggggtccaGGACGGAGTGGCAC
CCTCCCTGCtgttgtcctcctcgcctcggggagcgggaaggtcagggagg
gcgtgggaagggggggaaccgCGGCGCCGATACACGAGCGGACCGGGGCA
GAAACTACCCGGAGTTTGGGTGGTCgaacgacggggagggggggcgacgg
CCTATCCCGTGTCTGACGGACGACCACGCGGCCGGGGACTTGTTGGTGAA
CTTCTTCGCCTCCGTGCACCGGAACCACgggggggacgcggagggcgggg
cagggccctggccgccgggggaaggcaagggcgggacgggggagaggggg
ggggaggagaagggcaacGGCAGGGTCTTGGACGGAGgtaccctcccccc
cgccccctcgtccGTCAGCAGGACCGCCGACTCCCTGTCCGTCGCCGCCA
CCGGCACCGCCGTCCTTGctgccgccagcacctcagccgcggaggaggaa
gcgactaTGGCTCCGGGAGGGAGCTTTTGTgggaaaagcgaggaaagCTC
GTCCGCCGCGGCCTCGCCACTGAcgccctcctgtctctcGGGGGCGCATC
CGTCCCCTGCGTCTTCCACGTCGGcctcgctgccctccctgtccaccCCG
GACGCGGACCCGGGgcaccagggaggggggtacTCGGTGGCGGACGCCCC
GGGGATGGAGCCCACGTCGAcggtcaagagggagggagaggcctgCGGCC
TGGCCAtgagagaagagaagagcggagaaggagagcgacAGACCCCGGCG
GCCTTGGTgtgggggcaggagggcgggagggcgggggagagggagggctt
cgagGCGGGGTTGCTGGACCGAGAGGAAGGACCTGCGGATCCAGCCAAAC
GGCAAAAGATGATCAATAGCTGTTGAATGAACGTCGACAGAGGCTACACA
CccacggtggaggaaagtgTCCTTCCCAAAATGATCAAGCCCATCGATGC
GTCGGATTCCGGTCAGCCTTCCTTGAGCCCACCGCACCATTCGCCTTTGT
CGGCGGCCTCCCCGACacgcttccctcttccccccctcaccctcaAGCCT
TTGGCGCGCTCAGTGTCTAATCCCGTGATAACAGCGAGTAGCAATGCCCA
CCGGATGTCCTTGGTGCCTAGAGTTCCCCTTcggaagggaaaatggacgc
ctgaggaggaaatgtACGCCCACTACATCATCGATAATTTTAACAAGGGC
CTCATCAGCCTCACTCGCGgcaCCACCCTCCGCTCCTACCTCTCGGAGCG
ACTGAACTGCGACCCCATGCGGGTGACAAAGAAGTTCTCAGGCACGTCCT
GCATCGGCAAGAGTATCTTCTGTCCCTGCGAAGCCACGCCGGACAATTTG
GAAGCCAGCAAACGCGTCTCCTCCCGTCTGGccgagctggaggcggcTTT
CAAGTCCAAAGTCGACGCTCCTTCCGTTTTTCACCTGCCGCGGCacccca
cggccccgccgACACAGCCCTCCGGTCGTCGCCAGTCCCCTGCTGGGAAC
GGCCTGCCCCCAGCGTCGGTCCCCGCGACGGGCTCCGAGCTCCCCAGGCG
GGCTTCCTCAAGCTCGTTGGACGGGTTGCGAAAAGGGACAGAGGCCAATG
TCACGGACCCTTCTCTCGCCTTACTCCCGGCCCACGCGCCCGGTCTCCTT
AACGGGAGCGGACAGGCTGGTCCCGGTCAAATCGCACCCTTGgagccctc
tctctcctcgccGGAGGGCTCCcactgtctccctccccccttcctcctgg
tcgCACCAAGGcccgccagcacctgcaACCgttccgcccgcccccgtccc
cgcccggtTTTGCCTCGTTCGAGATGCCCTCCAGGCATTCGGCCCCGGAT
CTGTCCTTGGCCGTGTACGggtcagaggaggaggaggaagacgaggagga
ggaaggggtccaGGACGGAGTGGCACCCTCCCTGCtgttgtcctcctcgc
ctcggggagcgggaaggtcagggagggcgtgggaagggggggaaccgCGG
CGCCGATACACGAGCGGACCGGGGCAGAAACTACCCGGAGTTTGGGTGGT
CgaacgacggggagggggggcgacggCCTATCCCGTGTCTGACGGACGAC
CACGCGGCCGGGGACTTGTTGGTGAACTTCTTCGCCTCCGTGCACCGGAA
CCACgggggggacgcggagggcggggcagggccctggccgccgggggaag
gcaagggcgggacgggggagagggggggggaggagaagggcaacGGCAGG
GTCTTGGACGGAGgtaccctcccccccgccccctcgtccGTCAGCAGGAC
CGCCGACTCCCTGTCCGTCGCCGCCACCGGCACCGCCGTCCTTGctgccg
ccagcacctcagccgcggaggaggaagcgactaTGGCTCCGGGAGGGAGC
TTTTGTgggaaaagcgaggaaagCTCGTCCGCCGCGGCCTCGCCACTGAc
gccctcctgtctctcGGGGGCGCATCCGTCCCCTGCGTCTTCCACGTCGG
cctcgctgccctccctgtccaccCCGGACGCGGACCCGGGgcaccaggga
ggggggtacTCGGTGGCGGACGCCCCGGGGATGGAGCCCACGTCGAcggt
caagagggagggagaggcctgCGGCCTGGCCAtgagagaagagaagagcg
gagaaggagagcgacAGACCCCGGCGGCCTTGGTgtgggggcaggagggc
gggagggcgggggagagggagggcttcgagGCGGGGTTGCTGGACCGAGA
GGAAGGACCTGCGGATCCAGCCAAACGGCAAAAGATGATCAATAGCTGTT
GAATGAACGTCGACAGAGGCTACACACccacggtggaggaaagtgTCCTT
CCCAAAATGATCAAGCCCATCGATGCGTCGGATTCCGGTCAGCCTTCCTT
GAGCCCACCGCACCATTCGCCTTTGTCGGCGGCCTCCCCGACacgcttcc
ctcttccccccctcaccctcaAGCCTTTGGCGCGCTCAGTGTCTAATCCC
GTGATAACAGCGAGTAGCAATGCCCACCGGATGTCCTTGGTGCCTAGAGT
TCCCCTTcggaagggaaaatggacgcctgaggaggaaatgtACGCCCACT
ACATCATCGATAATTTTAACAAGGGCCTCATCAGCCTCACTCGCGgcaCC
ACCCTCCGCTCCTACCTCTCGGAGCGACTGAACTGCGACCCCATGCGGGT
GACAAAGAAGTTCTCAGGCACGTCCTGCATCGGCAAGAGTATCTTCTGTC
CCTGCGAAGCCACGCCGGACAATTTGGAAGCCAGCAAACGCGTCTCCTCC
CGTCTGGccgagctggaggcggcTTTCAAGTCCAAAGTCGACGCTCCTTC
CGTTTTTCACCTGCCGCGGCaccccacggccccgccgACACAGCCCTCCG
GTCGTCGCCAGTCCCCTGCTGGGAACGGCCTGCCCCCAGCGTCGGTCCCC
GCGACGGGCTCCGAGCTCCCCAGGCGGGCTTCCTCAAGCTCGTTGGACGG
GTTGCGAAAAGGGACAGAGGCCAATGTCACGGACCCTTCTCTCGCCTTAC
TCCCGGCCCACGCGCCCGGTCTCCTTAACGGGAGCGGACAGGCTGGTCCC
GGTCAAATCGCACCCTTGgagccctctctctcctcgccGGAGGGCTCCca
ctgtctccctccccccttcctcctggtcgCACCAAGGcccgccagcacct
gcaACCgttccgcccgcccccgtccccgcccggtTTTGCCTCGTTCGAGA
TGCCCTCCAGGCATTCGGCCCCGGATCTGTCCTTGGCCGTGTACGggtca
gaggaggaggaggaagacgaggaggaggaaggggtccaGGACGGAGTGGC
ACCCTCCCTGCtgttgtcctcctcgcctcggggagcgggaaggtcaggga
gggcgtgggaagggggggaaccgCGGCGCCGATACACGAGCGGACCGGGG
CAGAAACTACCCGGAGTTTGGGTGGTCgaacgacggggagggggggcgac
ggCCTATCCCGTGTCTGACGGACGACCACGCGGCCGGGGACTTGTTGGTG
AACTTCTTCGCCTCCGTGCACCGGAACCACgggggggacgcggagggcgg
ggcagggccctggccgccgggggaaggcaagggcgggacgggggagaggg
ggggggaggagaagggcaacGGCAGGGTCTTGGACGGAGgtaccctcccc
cccgccccctcgtccGTCAGCAGGACCGCCGACTCCCTGTCCGTCGCCGC
CACCGGCACCGCCGTCCTTGctgccgccagcacctcagccgcggaggagg
aagcgactaTGGCTCCGGGAGGGAGCTTTTGTgggaaaagcgaggaaagC
TCGTCCGCCGCGGCCTCGCCACTGAcgccctcctgtctctcGGGGGCGCA
TCCGTCCCCTGCGTCTTCCACGTCGGcctcgctgccctccctgtccaccC
CGGACGCGGACCCGGGgcaccagggaggggggtacTCGGTGGCGGACGCC
CCGGGGATGGAGCCCACGTCGAcggtcaagagggagggagaggcctgCGG
CCTGGCCAtgagagaagagaagagcggagaaggagagcgacAGACCCCGG
CGGCCTTGGTgtgggggcaggagggcgggagggcgggggagagggagggc
ttcgagGCGGGGTTGCTGGACCGAGAGGAAGGACCTGCGGATCCAGCCAA
ACGGCAAAAGATGATCAATAGCTGTTGA back to top
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