EWM26570.1, cds4103 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|585108657|gb|EWM26570.1| (hypothetical protein Naga_100421g2 [Nannochloropsis gaditana]) HSP 1 Score: 1275.77 bits (3300), Expect = 0.000e+0 Identity = 641/641 (100.00%), Postives = 641/641 (100.00%), Query Frame = 0 Query: 1 MNVDRGYTPTVEESVLPKMIKPIDASDSGQPSLSPPHHSPLSAASPTRFPLPPLTLKPLARSVSNPVITASSNAHRMSLVPRVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVDAPSVFHLPRHPTAPPTQPSGRRQSPAGNGLPPASVPATGSELPRRASSSSLDGLRKGTEANVTDPSLALLPAHAPGLLNGSGQAGPGQIAPLEPSLSSPEGSHCLPPPFLLVAPRPASTCNRSARPRPRPVLPRSRCPPGIRPRICPWPCTGQRRRRKTRRRKGSRTEWHPPCCCPPRLGEREGQGGRGKGGNRGADTRADRGRNYPEFGWSNDGEGGRRPIPCLTDDHAAGDLLVNFFASVHRNHGGDAEGGAGPWPPGEGKGGTGERGGEEKGNGRVLDGGTLPPAPSSVSRTADSLSVAATGTAVLAAASTSAAEEEATMAPGGSFCGKSEESSSAAASPLTPSCLSGAHPSPASSTSASLPSLSTPDADPGHQGGGYSVADAPGMEPTSTVKREGEACGLAMREEKSGEGERQTPAALVWGQEGGRAGEREGFEAGLLDREEGPADPAKRQKMINSC 641 MNVDRGYTPTVEESVLPKMIKPIDASDSGQPSLSPPHHSPLSAASPTRFPLPPLTLKPLARSVSNPVITASSNAHRMSLVPRVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVDAPSVFHLPRHPTAPPTQPSGRRQSPAGNGLPPASVPATGSELPRRASSSSLDGLRKGTEANVTDPSLALLPAHAPGLLNGSGQAGPGQIAPLEPSLSSPEGSHCLPPPFLLVAPRPASTCNRSARPRPRPVLPRSRCPPGIRPRICPWPCTGQRRRRKTRRRKGSRTEWHPPCCCPPRLGEREGQGGRGKGGNRGADTRADRGRNYPEFGWSNDGEGGRRPIPCLTDDHAAGDLLVNFFASVHRNHGGDAEGGAGPWPPGEGKGGTGERGGEEKGNGRVLDGGTLPPAPSSVSRTADSLSVAATGTAVLAAASTSAAEEEATMAPGGSFCGKSEESSSAAASPLTPSCLSGAHPSPASSTSASLPSLSTPDADPGHQGGGYSVADAPGMEPTSTVKREGEACGLAMREEKSGEGERQTPAALVWGQEGGRAGEREGFEAGLLDREEGPADPAKRQKMINSC Sbjct: 1 MNVDRGYTPTVEESVLPKMIKPIDASDSGQPSLSPPHHSPLSAASPTRFPLPPLTLKPLARSVSNPVITASSNAHRMSLVPRVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVDAPSVFHLPRHPTAPPTQPSGRRQSPAGNGLPPASVPATGSELPRRASSSSLDGLRKGTEANVTDPSLALLPAHAPGLLNGSGQAGPGQIAPLEPSLSSPEGSHCLPPPFLLVAPRPASTCNRSARPRPRPVLPRSRCPPGIRPRICPWPCTGQRRRRKTRRRKGSRTEWHPPCCCPPRLGEREGQGGRGKGGNRGADTRADRGRNYPEFGWSNDGEGGRRPIPCLTDDHAAGDLLVNFFASVHRNHGGDAEGGAGPWPPGEGKGGTGERGGEEKGNGRVLDGGTLPPAPSSVSRTADSLSVAATGTAVLAAASTSAAEEEATMAPGGSFCGKSEESSSAAASPLTPSCLSGAHPSPASSTSASLPSLSTPDADPGHQGGGYSVADAPGMEPTSTVKREGEACGLAMREEKSGEGERQTPAALVWGQEGGRAGEREGFEAGLLDREEGPADPAKRQKMINSC 641
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|299116879|emb|CBN74989.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 133.65 bits (335), Expect = 7.459e-30 Identity = 61/103 (59.22%), Postives = 77/103 (74.76%), Query Frame = 0 Query: 79 LVPRVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVDA 181 L PR P+RKGKWTPEEE+Y II++FNKGL+ L GTTLRSYLSE+LNCDPMR+TKKF+G SCIGK +F P E TP+NL + R L E+ F ++++ Sbjct: 247 LDPRAPVRKGKWTPEEEVYTTKIINDFNKGLLPLAPGTTLRSYLSEKLNCDPMRITKKFAGASCIGKRVFMPVERTPENLIETHRSRRELEEMARKFHIRLES 349
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|298707207|emb|CBJ29954.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 108.227 bits (269), Expect = 2.671e-24 Identity = 48/95 (50.53%), Postives = 69/95 (72.63%), Query Frame = 0 Query: 86 RKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVD 180 RKGKWT EEE II F+ G++ L GTTLR+YL+++L+CDPMR+TKKF+GT+C+GK ++ CE T E +K+ LAELEA F+++++ Sbjct: 9 RKGKWTSEEEALTARIIHYFSLGVLQLPDGTTLRAYLAQKLDCDPMRITKKFTGTNCLGKRVYHSCERTTATYEVAKQAVEELAELEARFQARLE 103
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|1214688871|gb|OWZ04650.1| (hypothetical protein PHMEG_00023412, partial [Phytophthora megakarya]) HSP 1 Score: 108.612 bits (270), Expect = 6.345e-23 Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = 0 Query: 85 LRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAF 175 LRKGKWT EE YA + + F +GL+ L RGT LR YLS++LNC+PMR+TKKF+G CIGK +F PC TP++ + L LEAAF Sbjct: 165 LRKGKWTEEESRYASQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVKIMQAQLELVTLEAAF 255
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|299117483|emb|CBN73986.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 108.612 bits (270), Expect = 3.214e-22 Identity = 51/100 (51.00%), Postives = 69/100 (69.00%), Query Frame = 0 Query: 85 LRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIF-----CPCEATPDNLEASKRVSSRLAELEAAFKSKV 179 LR+GKWTPEEE YA+ +I F GL+ LT GTTLR++LS LNCDPMR++KKF G++CIGK +F +++P + EA + + LAELE F +V Sbjct: 116 LRRGKWTPEEEKYANRLIQEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFVGSNCIGKQVFRRQQGVDEDSSPLSEEAMDKSRAELAELERKFLERV 215
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|953486150|emb|CEG50328.1| (hypothetical protein PHALS_08047 [Plasmopara halstedii]) HSP 1 Score: 108.997 bits (271), Expect = 5.239e-22 Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 0 Query: 85 LRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKV 179 LRKGKWT EE YA + F KGL+ + RGT LR YLS++LNC+PMR+TKKF+G CIGK +F PC TP++ + L LEAAF ++ Sbjct: 130 LRKGKWTEEESRYAAQLTKYFKKGLLPIERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSLTPESRLRIMQAQVELVALEAAFLKRL 224
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|1210526797|dbj|GAX14445.1| (hypothetical protein FisN_11Hh096 [Fistulifera solaris]) HSP 1 Score: 108.997 bits (271), Expect = 5.894e-22 Identity = 45/97 (46.39%), Postives = 65/97 (67.01%), Query Frame = 0 Query: 85 LRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKVDA 181 LR+GKWT EEE Y +I +FN G + GTTLR+YLSE+L CDPMR+TKKF+G +CIGK +F P +P+N+ + + L LE + ++++ Sbjct: 157 LRRGKWTAEEEAYVARVIQDFNSGFLDAPAGTTLRTYLSEKLQCDPMRITKKFTGDACIGKRVFHPAVRSPNNVSTIDKAQAELLHLEKRWHRRLES 253
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|223994807|ref|XP_002287087.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220978402|gb|EED96728.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 111.309 bits (277), Expect = 7.217e-22 Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 0 Query: 82 RVPLRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSR--LAELEAAFKSKV 179 R PLR+GKWT EEE YA +I F GL+ LT GTTLR++LS+ LNCDPMR++KKF G++CIGK +F A +NL ++ +R L+ELE F +V Sbjct: 113 RAPLRRGKWTAEEEAYASRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRRRGADVNNLTPAQIQQTRLELSELEKRFLDRV 212
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|970635775|gb|KUF80595.1| (hypothetical protein AM587_10014009 [Phytophthora nicotianae] >gi|970659484|gb|KUF97118.1| hypothetical protein AM588_10009276 [Phytophthora nicotianae]) HSP 1 Score: 107.071 bits (266), Expect = 8.485e-22 Identity = 48/95 (50.53%), Postives = 64/95 (67.37%), Query Frame = 0 Query: 85 LRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKV 179 LRKGKWT EE YA + + F +GL+ + RGT LR YLS++LNC+PMR+TKKF+G CIGK +F PC TP++ + L LEAAF ++ Sbjct: 57 LRKGKWTEEESRYAAQLTNYFKEGLLPIERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVRIMQAQLELVALEAAFIKRL 151
BLAST of EWM26570.1 vs. NCBI_GenBank
Match: gi|695411362|ref|XP_009525453.1| (hypothetical protein PHYSODRAFT_299882 [Phytophthora sojae] >gi|348682920|gb|EGZ22736.1| hypothetical protein PHYSODRAFT_299882 [Phytophthora sojae]) HSP 1 Score: 109.383 bits (272), Expect = 1.154e-21 Identity = 49/95 (51.58%), Postives = 64/95 (67.37%), Query Frame = 0 Query: 85 LRKGKWTPEEEMYAHYIIDNFNKGLISLTRGTTLRSYLSERLNCDPMRVTKKFSGTSCIGKSIFCPCEATPDNLEASKRVSSRLAELEAAFKSKV 179 LRKGKWT EE YA + + F +GL+ L RGT LR YLS++LNC+PMR+TKKF+G CIGK +F PC TP++ + L LEAAF ++ Sbjct: 189 LRKGKWTEEESRYAAQLTNYFKEGLLPLERGTMLRLYLSQKLNCEPMRITKKFTGGECIGKQVFRPCSPTPESRVRIMQAQLELVALEAAFIKRL 283 The following BLAST results are available for this feature:
BLAST of EWM26570.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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