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Properties
| Property Name | Value |
|---|
| Product | nadh dehydrogenase |
| Orig transcript id | gnl|cribi|Naga_100003g74.1781.mrna |
| Orig protein id | gnl|cribi|Naga_100003g74.1781 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:1019884..1021649 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna411 ID=rna411|Name=rna411|organism=Nannochloropsis gaditana|type=mRNA|length=2205bp
ATGACGTCAACATCATCCTCGCAACCCCCACTACCCGTGGGGTCGCAAGG
GCAGGCCATCGCGGTAATCAGCAACAAGTACAGGCTCTCTCGGCGGCTTG
GGGGGGGTTCATTTGGTGACATTTACCTCGGGGAGTATATCCCCACGAGT
GAGAAGGTGGCCGTCAAATTCGAAAAGCATGGCGCACGATGCCCTCAGCT
TCGCCATGAATACAAGGTCTATCGAGAACTTCAGCATTGCGCAGGCTTTG
GCAAAGTCCACTATTTTGGGCAGCTCGATTGCTACAACGTGATGGTAATG
GAGCTGCTGGGTTACTCGTTGGAGGATCTGTTCAACAAGTGTGGCCGCCG
CTTTTCCCTCCGAACTGTGTTGCAGCTCGCAGACCAGGTATTGGAACGCG
TGGAGATCATGCACAATCGCCATCTCATCCACCGGGACATCAAGCCCGCA
AATTTCGTCGTCGGGCATGGGCCTGCGTCCGCCATTGTCCATTGCATCGA
TTTCGGGCTGAGCAAGCGGTACCGGCACCCGCGCACGCTCCAGCACATAG
CCTACCGGGAGGGCCGCTCCTTGACCGGGACGCCCCGCTACGCCTCGATC
AACAATCATCTGGGCATCGAGCAGTCACGTCGAGACGATTTGGAGTCGAT
TGGATACGTTCTCATCTATTTTTTGCGCGGCATTTTGCCCTGGCAAGGAC
TGAAGGCCAAGACCGCGAGCAAGAAGTACAAGATGATCATGGAGAAGAAG
CAGTCCGTGTCTGTCGCGGAACTCTGCCATGGTTGCCCGGTCCAGTTTGC
GGAGTACTTGTCGTACTGTCGCTCGCTCTCCTTCGACGGGAACCCCGACA
TGTTCTACTTGCGGGGCCTATTCCGCGATCTCTACGTACAGCAAGGCTTT
GGCGTGCACCAGTCCCCCCCCGCCACCATGCCCTCCATGATAGCAACGGG
AGGGCGGCCCACTATAGGAAGTGCCGCGGCATTGGCTGCTTCAGCGGGGC
CGATAGAGTGGGATTGGGATAGATTTGTGAGTCCTGCATATTACAGCGCC
TCTGCCGGCGGAGGGGTGCCGAGTGCTGCCGATGGGGCGAATGTGGGGGT
GAAAGGACGGGCTGTAGTTGTGGCGAAAGAAAAGGCGATGAAAGATAACG
CAGTGAGAGGCAGGGATTTGATGGATATAGCGGGCGGGGACGATGTAAGG
AAGGAAATCGTTAAATCTGCGAGTGGAGGAGAGGGAGGGATTGTAGCGAT
GCAGAGTTCGGACTCGACTTTGCCCGTGAAGAGGCAGCAACAGCAGCAGT
CGCCCTTGCATCAGTTGAAGGAGTCCCTACGGATTTCTGATGACGGAGAA
GCCGCCGTTGCTCGTGGGGAGGGGGGCGGCGGTGCGGACAATCAGCAGGG
CAGCCAGGGCAAACAGAGTCACAAAAGGCACCTCTCTCTCTCCCAGGTTG
CAGGGGATGGAACTGCGAACTACGCGGCGAAAAGCGGGCCTAGTGGAGCG
GGCGTCGGGCTTTGGGGTGCCGGAGAGGGAGGGGGAGGTGTCGACGGAGG
GATTTACAAACAGCAGATGGGAGGGTGTCGGCCCAAGACGGGCCACGCCT
TGCAGCAGCAGCAGTCACAAGCTCAGCCGTTGGCGGGCCTACTTCCCGAT
GCCTTTATGGCGGGGAATGGAGGCAAGCCACTGTCAGCACCGACCAAGAA
CGCGAAGGAGGAGGAGGGTGCGTGTGCGCCTGATGCCATGCCTGGGGAGA
GAGTGGAGATGGCCAGGCTCGGGGGTTCGGACCTTCAAGGAGCGGCTGCC
TTGGGCGAGTCGATGGGTGGGACTAAGGCGGACTCTTTTTTGAACGGCAT
CTTGCGGAAAGCGAAGTCTTTTGCCCGGCACTCCTCTGCAACTGTCTCTG
GCCCTGTCGACCCTGCCGATAACCCGCGTGACGGTGCGGGACTTACGACA
GCCGTATCGGCACCGCTAAACCCGTCGCTTCCAGGGCGTCGGTCTCTGCG
TCCTGCCAATGCGTCGGCCTCGAGCCTGAAGGGAGGGTTGAAAGGGGGCA
TGGGTGGGAACGCTGTGGCATCCGCCGGCGCAGCGGGTGGTCAAGAAAGA
GCGAGTGCTGGCACGTCGGGGCCGCGGATAGCCGCGTCTTCCTCATCGTC
CTCGAAGCACATGAGTGGCGGTTTTGGCCAGACAGGGCTAGCAGTCCCGT
CATAA back to topprotein sequence of rna411 >rna411-protein ID=rna411-protein|Name=rna411|organism=Nannochloropsis gaditana|type=polypeptide|length=279bp
MLPAVAGRLSRSILRVPAFNKGHALTRVTGAGFHSGRARLMTNYHPTAQH
KDEPGNSVKDAWDFSEENYKRVDMILHRYPTNYKAAGIIPLLDLAQRQNG
GWLPVAAMDKVASIVGVVPMRVYEVATFYTMFNREKVGKYFIQLCGTTPC
MVNGAEEIRATIEKHLGIKEGETSKDGLFTLREVECLGSCANAPMVQLND
DYYECLTPASTIELLEACKKGNPPKMGRWGSLPMNGQVSCEGPHGKTTLK
EPAPAPGFMMRKDLDGNVDPATVKRDMHY back to topmRNA from alignment at CM002455.1:1019884..1021649- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna411 ID=rna411|Name=rna411|organism=Nannochloropsis gaditana|type=mRNA|length=1766bp|location=Sequence derived from alignment at CM002455.1:1019884..1021649- (Nannochloropsis gaditana)
ATGCGCCGTACTAAGTGGGAGAAGGGCAACTAATGCAAGACTTCTGAGGG
ACTTCAGGCACACTCACTTTTCATATACCTTCACATGAATATTGCAGGAG
AGCAAGAGTGGCAGGGGATTCAAATTTGTGTAGTTGAGCGACACAATTAT
GCTTCCAGCGGTTGCAGGTCGCCTGAGCCGCTCTATTCTGCGCGTTCCTG
CATTTAACAAGGTAATCCTGAATAAAAATAGCCGCTGAGGTTGCAGGGTC
GCTGGGTTGATGCGATCTGATTCCTTCTCTGACGTATATTCTTATTCACC
TCTCCTACTGGCTATGCAGGGGCATGCTCTGACACGGGTCACAGGCGCTG
GGTTCCACAGTGGACGGGCAAGGCTCATGACCAACTACCACCCCACTGCA
CAACACAAAGATGAGCCGGGGAACAGCGTGAAGGATGCGTGGGATTTTTC
CGAAGGTAGGTAGATGTCGATGAGCAGGCAGCGTTCATATGGCTACAAGC
CTCGCACTACCAGAAGCTCGCTTCTCGATTTACCTCCAAACATAATCTTC
TCTCGTCCTTTCTTCTTTTTAATGGACAACGCTGAATTCTTTCAAGAGAA
CTACAAGCGCGTCGATATGATTTTGCATCGGTATCCGACCAACTACAAAG
CTGCGGGAATTATTCCCCTGCTGGACCTTGCGCAGAGGCAGAATGGAGGC
TGGCTGCCCGTGGCGGCGATGGACAAGGTCGCCTCCATCGTGGGGGTGGT
ACCGATGCGCGTTTATGAGGTGGCCACTTTCTACACCATGTTCAACAGGT
GCGAGGGGAGGCAATGGAGGTGTGGGGACAGTTTCGGCTTGTAAGCTGTG
AGAGCCATTACAACTCTCCTTCGTACTAACGCCTACATCTCCTTGCCACC
CTGTGGGCGCTTCTTATGCTTTTTCACATTTGGCAGAGAGAAGGTGGGGA
AGTACTTCATTCAGCTCTGCGGTACGACACCCTGTATGGTGAATGGCGCC
GAGGAGATCCGAGCCACCATCGAAAAGCACCTCGGCATCAAGGAGGGAGA
AACGAGCAAAGACGGTTTGTTCACGTTGCGGGAAGTGGAGTGTTTGGGTT
CGTGCGCCAATGCCCCCATGGTCCAGCTGAATGACGACTACTACGTAAGT
CCGGGAGCGTCGGGAGTTAAAGTCTCGGATAGGTGGCGTTAAGAAGTGGC
GAGTTGGAGGCTCGTTCTTCAGCACAAAACTAATGGCACGCTTTATGTTG
CCCACGTTATCCTCTTAGCACCCTTTCACCGTCTGTCCTCCGTTTTTACA
TCGCTACCCCGCTTTTTCCAGGAATGCCTAACCCCGGCCTCCACCATCGA
GCTCTTGGAGGCCTGCAAGAAAGGGAATCCTCCCAAAATGGGCCGCTGGG
GCTCTCTTCCCATGAATGGACAGGTGTCGTGCGAGGGCCCCCACGGGAAG
ACGACGCTGAAGGAACCGGCGCCTGCCCCCGGATTTATGATGCGAAAGGA
CTTGGACGGGAACGTAGACCCTGCGACGGTGAAGCGGGACATGCATTACT
AGGAAAAGGGATGAGGATTCTAGATTGGGGGGGGTTTGGTAAATTTACAA
GGTCCGACGTCTCCCTGGGCCCAGACGCCCAGGATGAGGTTTGTAATACC
GATGCCCATCAAGCGGTGCCAGACAGTGAGGGTCTGATGAAGGAGTGCAT
AGCTTTGATGATAAAAGGTGTCCATGCAACACGTAAAGAAATACGATACC
AGACTGACGCAGGCCT back to topCoding sequence (CDS) from alignment at CM002455.1:1019884..1021649- >rna411 ID=rna411|Name=rna411|organism=Nannochloropsis gaditana|type=CDS|length=4200bp|location=Sequence derived from alignment at CM002455.1:1019884..1021649- (Nannochloropsis gaditana)
GAATGCCTAACCCCGGCCTCCACCATCGAGCTCTTGGAGGCCTGCAAGAA
AGGGAATCCTCCCAAAATGGGCCGCTGGGGCTCTCTTCCCATGAATGGAC
AGGTGTCGTGCGAGGGCCCCCACGGGAAGACGACGCTGAAGGAACCGGCG
CCTGCCCCCGGATTTATGATGCGAAAGGACTTGGACGGGAACGTAGACCC
TGCGACGGTGAAGCGGGACATGCATTACTAGAGAGAAGGTGGGGAAGTAC
TTCATTCAGCTCTGCGGTACGACACCCTGTATGGTGAATGGCGCCGAGGA
GATCCGAGCCACCATCGAAAAGCACCTCGGCATCAAGGAGGGAGAAACGA
GCAAAGACGGTTTGTTCACGTTGCGGGAAGTGGAGTGTTTGGGTTCGTGC
GCCAATGCCCCCATGGTCCAGCTGAATGACGACTACTACAGAACTACAAG
CGCGTCGATATGATTTTGCATCGGTATCCGACCAACTACAAAGCTGCGGG
AATTATTCCCCTGCTGGACCTTGCGCAGAGGCAGAATGGAGGCTGGCTGC
CCGTGGCGGCGATGGACAAGGTCGCCTCCATCGTGGGGGTGGTACCGATG
CGCGTTTATGAGGTGGCCACTTTCTACACCATGTTCAACAGGGGCATGCT
CTGACACGGGTCACAGGCGCTGGGTTCCACAGTGGACGGGCAAGGCTCAT
GACCAACTACCACCCCACTGCACAACACAAAGATGAGCCGGGGAACAGCG
TGAAGGATGCGTGGGATTTTTCCGAAGATGCTTCCAGCGGTTGCAGGTCG
CCTGAGCCGCTCTATTCTGCGCGTTCCTGCATTTAACAAGGAATGCCTAA
CCCCGGCCTCCACCATCGAGCTCTTGGAGGCCTGCAAGAAAGGGAATCCT
CCCAAAATGGGCCGCTGGGGCTCTCTTCCCATGAATGGACAGGTGTCGTG
CGAGGGCCCCCACGGGAAGACGACGCTGAAGGAACCGGCGCCTGCCCCCG
GATTTATGATGCGAAAGGACTTGGACGGGAACGTAGACCCTGCGACGGTG
AAGCGGGACATGCATTACTAGAGAGAAGGTGGGGAAGTACTTCATTCAGC
TCTGCGGTACGACACCCTGTATGGTGAATGGCGCCGAGGAGATCCGAGCC
ACCATCGAAAAGCACCTCGGCATCAAGGAGGGAGAAACGAGCAAAGACGG
TTTGTTCACGTTGCGGGAAGTGGAGTGTTTGGGTTCGTGCGCCAATGCCC
CCATGGTCCAGCTGAATGACGACTACTACAGAACTACAAGCGCGTCGATA
TGATTTTGCATCGGTATCCGACCAACTACAAAGCTGCGGGAATTATTCCC
CTGCTGGACCTTGCGCAGAGGCAGAATGGAGGCTGGCTGCCCGTGGCGGC
GATGGACAAGGTCGCCTCCATCGTGGGGGTGGTACCGATGCGCGTTTATG
AGGTGGCCACTTTCTACACCATGTTCAACAGGGGCATGCTCTGACACGGG
TCACAGGCGCTGGGTTCCACAGTGGACGGGCAAGGCTCATGACCAACTAC
CACCCCACTGCACAACACAAAGATGAGCCGGGGAACAGCGTGAAGGATGC
GTGGGATTTTTCCGAAGATGCTTCCAGCGGTTGCAGGTCGCCTGAGCCGC
TCTATTCTGCGCGTTCCTGCATTTAACAAGGAATGCCTAACCCCGGCCTC
CACCATCGAGCTCTTGGAGGCCTGCAAGAAAGGGAATCCTCCCAAAATGG
GCCGCTGGGGCTCTCTTCCCATGAATGGACAGGTGTCGTGCGAGGGCCCC
CACGGGAAGACGACGCTGAAGGAACCGGCGCCTGCCCCCGGATTTATGAT
GCGAAAGGACTTGGACGGGAACGTAGACCCTGCGACGGTGAAGCGGGACA
TGCATTACTAGAGAGAAGGTGGGGAAGTACTTCATTCAGCTCTGCGGTAC
GACACCCTGTATGGTGAATGGCGCCGAGGAGATCCGAGCCACCATCGAAA
AGCACCTCGGCATCAAGGAGGGAGAAACGAGCAAAGACGGTTTGTTCACG
TTGCGGGAAGTGGAGTGTTTGGGTTCGTGCGCCAATGCCCCCATGGTCCA
GCTGAATGACGACTACTACAGAACTACAAGCGCGTCGATATGATTTTGCA
TCGGTATCCGACCAACTACAAAGCTGCGGGAATTATTCCCCTGCTGGACC
TTGCGCAGAGGCAGAATGGAGGCTGGCTGCCCGTGGCGGCGATGGACAAG
GTCGCCTCCATCGTGGGGGTGGTACCGATGCGCGTTTATGAGGTGGCCAC
TTTCTACACCATGTTCAACAGGGGCATGCTCTGACACGGGTCACAGGCGC
TGGGTTCCACAGTGGACGGGCAAGGCTCATGACCAACTACCACCCCACTG
CACAACACAAAGATGAGCCGGGGAACAGCGTGAAGGATGCGTGGGATTTT
TCCGAAGATGCTTCCAGCGGTTGCAGGTCGCCTGAGCCGCTCTATTCTGC
GCGTTCCTGCATTTAACAAGGAATGCCTAACCCCGGCCTCCACCATCGAG
CTCTTGGAGGCCTGCAAGAAAGGGAATCCTCCCAAAATGGGCCGCTGGGG
CTCTCTTCCCATGAATGGACAGGTGTCGTGCGAGGGCCCCCACGGGAAGA
CGACGCTGAAGGAACCGGCGCCTGCCCCCGGATTTATGATGCGAAAGGAC
TTGGACGGGAACGTAGACCCTGCGACGGTGAAGCGGGACATGCATTACTA
GAGAGAAGGTGGGGAAGTACTTCATTCAGCTCTGCGGTACGACACCCTGT
ATGGTGAATGGCGCCGAGGAGATCCGAGCCACCATCGAAAAGCACCTCGG
CATCAAGGAGGGAGAAACGAGCAAAGACGGTTTGTTCACGTTGCGGGAAG
TGGAGTGTTTGGGTTCGTGCGCCAATGCCCCCATGGTCCAGCTGAATGAC
GACTACTACAGAACTACAAGCGCGTCGATATGATTTTGCATCGGTATCCG
ACCAACTACAAAGCTGCGGGAATTATTCCCCTGCTGGACCTTGCGCAGAG
GCAGAATGGAGGCTGGCTGCCCGTGGCGGCGATGGACAAGGTCGCCTCCA
TCGTGGGGGTGGTACCGATGCGCGTTTATGAGGTGGCCACTTTCTACACC
ATGTTCAACAGGGGCATGCTCTGACACGGGTCACAGGCGCTGGGTTCCAC
AGTGGACGGGCAAGGCTCATGACCAACTACCACCCCACTGCACAACACAA
AGATGAGCCGGGGAACAGCGTGAAGGATGCGTGGGATTTTTCCGAAGATG
CTTCCAGCGGTTGCAGGTCGCCTGAGCCGCTCTATTCTGCGCGTTCCTGC
ATTTAACAAGGAATGCCTAACCCCGGCCTCCACCATCGAGCTCTTGGAGG
CCTGCAAGAAAGGGAATCCTCCCAAAATGGGCCGCTGGGGCTCTCTTCCC
ATGAATGGACAGGTGTCGTGCGAGGGCCCCCACGGGAAGACGACGCTGAA
GGAACCGGCGCCTGCCCCCGGATTTATGATGCGAAAGGACTTGGACGGGA
ACGTAGACCCTGCGACGGTGAAGCGGGACATGCATTACTAGAGAGAAGGT
GGGGAAGTACTTCATTCAGCTCTGCGGTACGACACCCTGTATGGTGAATG
GCGCCGAGGAGATCCGAGCCACCATCGAAAAGCACCTCGGCATCAAGGAG
GGAGAAACGAGCAAAGACGGTTTGTTCACGTTGCGGGAAGTGGAGTGTTT
GGGTTCGTGCGCCAATGCCCCCATGGTCCAGCTGAATGACGACTACTACA
GAACTACAAGCGCGTCGATATGATTTTGCATCGGTATCCGACCAACTACA
AAGCTGCGGGAATTATTCCCCTGCTGGACCTTGCGCAGAGGCAGAATGGA
GGCTGGCTGCCCGTGGCGGCGATGGACAAGGTCGCCTCCATCGTGGGGGT
GGTACCGATGCGCGTTTATGAGGTGGCCACTTTCTACACCATGTTCAACA
GGGGCATGCTCTGACACGGGTCACAGGCGCTGGGTTCCACAGTGGACGGG
CAAGGCTCATGACCAACTACCACCCCACTGCACAACACAAAGATGAGCCG
GGGAACAGCGTGAAGGATGCGTGGGATTTTTCCGAAGATGCTTCCAGCGG
TTGCAGGTCGCCTGAGCCGCTCTATTCTGCGCGTTCCTGCATTTAACAAG back to top
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