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Properties
| Property Name | Value |
|---|
| Product | dynein light intermediate chain |
| Orig transcript id | gnl|cribi|Naga_100001g9.8225.mrna |
| Orig protein id | gnl|cribi|Naga_100001g9.8225 |
| Gene | D1LIC |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:857466..859428 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4103 ID=rna4103|Name=rna4103|organism=Nannochloropsis gaditana|type=mRNA|length=1700bp
AGGATAGAGTGAATGTGTGATTGTTTCGGCTATACGGCAGAAGCTGGATG
AACCTGAGGCTCGTCAGCCCTTGAACGTCACTGGAGACCTTCGGGTAGAA
AGTCAGACCCTTGTACCATTTATGAATATAGCCATTCCGACCAGTTTTCA
TTTAATACTAACCTTTATTTCCTTCGTTTGGTTATATCAACGTACTTTAT
ACGCCATGAGCAGGAAAATATCTTGTTTTTTGCAGGATTGTCGCTGCGAG
GATCGGCTTTCTCTAGCTAGACCTCTCTTCAAGAAAAGTCCACGATGGAA
GAACAAGCATTTCAAGTGTCAACTATGTCCTCGCAAGCTTACTTCGGCAA
GTGGAATGGTAATTCATGTGACACAGGTACACAAAGAAACGCTAAAAAAA
ATACCCGGTGCGAAGGAAGGAAGAGATTCTGTGGATGTAGAAGTCTTCGG
CATGCAGGGTATTCCCATGGAATGCCTCATGGAACGCGCCGCCAAGAAGC
AGAGGACAGGAGGGGATCCAGGGGGCTCTCACGGAGAGGCTAACGGTGGA
GGAATGCCGGGCTTGCCGCCCGGTATGGGCCCAGGGATGGGTATGGGAGC
AGGCTTTCCTCCCGGAATGGGAGGCCCTCCGGGACCCAATGGTATGTACG
GACAGATGCCCAATTTCCCACCGCAGCAAGGAGGAGTCTTTGGCGGGTAC
GGCATGGGGGGTTTCCCGCCCAGGCCGATGTCAGGGCCGCCGGGCATGTT
CCCTCCAGCAGGCAGGATGATGATGCCCCATCAAGGGGGAATGCCTCCGG
GCATGTATCCCTTTCCCCCGGGCCAGCAGGCCCCTCAGGGATTCCCGAGG
AGCCAGCCGGGGATGCCGCCCCTCCCTGCCTTGGGATCGGCCCCCTTGGG
GCCGGGCGGGTACGTTCCTGGGCAGCATCAGCAACAGCAACATTCCACGC
AGGAGCCGCGTCACCCCCACCAAGCACCACAACCGTCCCAGCCGGGGCAA
TCCTCACCATCGCAACCTCATCATCAACAACACCCGCAGCATTACCAACC
CCAGCAGCCGCAACCATACCAACAAGGCATACCTCCCATGCCCCCCGGGC
AAGCTCCTCCCCGTCCAGGAGTGTTTCCCCCGGGCCCGCCCCCTGGTCTG
CCCCCAGGCGCCCCCCCTCGGCCCCTCTTCCCTGTTGCTGGCTTCGCGCC
CGCCCCTCCTGCGACCAGCTCCCCTACAGTGTCGGCTGCCCCCTCCGGGA
CACAACATCCAGCGACCGAAACGACGGCAGTGGCCACCAAGGAGATGAAC
TTGGTGTACGCAGAGGAGTCAGAGTCCATGGAAGAACGGCGGGCCAAGCT
TCCCAAGTATTTCTACGATGAAAAGGTCGTTCTTGCGGGAAGTGGGTCTT
AAGAACGACGAGTTGAAGCGAGCGGAAAGGGTTGATGTCAGGGGGCTTGC
GGGAGATTGGCACAGGGGAAGAATGAACTTTTCCGCTCAACAGCAGCTCT
TCTTTTTTGAAAAGTCGCCATTTTGTCTCAGGCTTTGCTTCACATATGAG
ACGCCTACACTGGCACTGGTGCTGTGTGCAAATAAAAGGAGGAAACCATA
AGGTCTGTTCCTTTTTTAACCATGATAAAGCGAGACGATGTCCTTCGCGC
CTCCAACTCGTGAACTGAAGACAGAAAAATCGTTGTATGGACTTGAGCCA back to topprotein sequence of rna4103 >rna4103-protein ID=rna4103-protein|Name=rna4103|organism=Nannochloropsis gaditana|type=polypeptide|length=607bp
MSAGENAGVAQRETELIWGPLLAEAARSEQSNFTPGTILFLGDAAVGKTR
LIDRFITSYDALERQAAATGRNFIAEEEKEDEEGQEGSGALSSHDHSLLS
YAFFPAIDPVGCKAGGQSWDNGTVGRSSDCLPGRCPAGASKGLAEDDQDA
GVDENEMDAGARVNVWSLSDPALKDLLHVALDDPGVRRRAASIRSEVPTD
PRFDTSSLNSKSTPAQTLQRTICMIAIDLTRPWACESALERWVGVLRSVL
GEKARAGCHKGEEEGEEERVRKARLVAYLSRCYQGEDMDRVWLERGELKE
EDEGGGLEEPKVVFRINRMESSGGRPLSSPQPARSTPLPAGVLEENLGVP
LVVVGLKADLAPVPDSYDDGLRSLFFQQYLRRVCLKYGASLVYTSASNGD
NCLLLQRYLLHRLYPEHFSFLLPVQAPRALTFVPSGWDTPELVQKLLSPQ
AVPWPPSLTFSEIFVPPKGARAYLDRGDGGAEVCSETWEQESSERHTEIT
PTQAWLERLWEQQQQQRQRCPQNLGDGDCGRTMAGEADGSAGNHDAGGLR
EGPMGSTGKGRSTRYGNSNRSIGEANQRSEPYNAGGGADKAEIRNFFEGL
LAGGGKK back to topmRNA from alignment at CM002462.1:857466..859428+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4103 ID=rna4103|Name=rna4103|organism=Nannochloropsis gaditana|type=mRNA|length=1963bp|location=Sequence derived from alignment at CM002462.1:857466..859428+ (Nannochloropsis gaditana)
AGAGGCGATGCAAACGATAACGGACACCAACATGCACATTCAATAACCTG
CACAACAGTTCGTGGATGTCGGCAGGTGAAAATGCTGGGGTAGCACAGCG
GGAAACAGAGCTTATTTGGGGGCCCTTGCTTGCGGAAGCAGCTCGTTCGG
AGCAGTCGAACTTCACCCCTGGCACGATTCTTTTTCTAGGCGACGCAGCT
GTAGGGAAAACTCGGTTGATTGACCGCTTCATCACAAGCTACGATGCCTT
GGAAAGGCAGGCGGCAGCGACCGGAAGAAATTTTAttgccgaggaggaga
aggaggacgaggaaggccaggaggggagcggggccCTATCATCGCACGAT
CACTCTCTGCTCTCTTacgcctttttccctgcaATCGACCCCGTGGGATG
CAAAGCAGGTGGACAATCGTGGGATAATGGCACAGTAGGAAGGTCTTCGG
ATTGTCTACCGGGTAGATGCCCGGCTGGGGCTTCAAaagggctggcggag
gacgaccaAGACGCCGGCGTAGATGAGAACGAAATGGATGCAGGAGCCCG
CGTAAACGTCTGGTCCCTGAGCGACCCTGCTCTCAAGGATCTATTGCACG
TTGCGCTGGATGATCCTGGAGTACGCCGCAGAGCTGCAAGCATAAGAAGT
GAGGTTCCGACCGACCCGCGCTTTGACACCAGCAGCCTAAACAGCAAGAG
CACCCCTGCTCAGACGTTACAGCGGACAATTTGCATGATTGCGATAGATT
TGACCCGGCCCTGGGCATGTGAATCGGCGCTGGAGCGATGGGTTGGTGTG
TTGAGAAGTGTATTGGGAGAGAAGGCCCGTGCAGGGTGtcacaagggaga
ggaggagggagaggaagagagggtacGGAAAGCACGCTTGGTGGCCTATC
TGAGCAGATGCTACCAAGGCGAGGACATGGATAGGGTTTGGTTGGAGCGT
GGCgaattgaaggaggaggatgaggggggaggcctgGAGGAACCTAAAGT
TGTGTTCCGGATCAACAGAATGGAGTCGAGTGGAGGCCGTCCTCTGTCGT
CCCCTCAACCCGCTCGCTCTACCCCACTACCAGCGGGCGTGCTTGAAGAA
AATCTGGGTGTGCCTTTGGTCGTTGTGGGCCTCAAAGCTGACCTTGCGCC
CGTGCCGGACTCTTACGACGATGGGCTCCGcagcctctttttccaacAAT
ACCTCCGTCGCGTCTGCCTCAAATATGGCGCCTCGCTCGTCTATACCTCG
GCTAGCAACGGGGAcaactgcctcctccttcagcgcTACCTTCTTCATCG
CCTCTACCCTGagcatttctccttcctcctccccgtccaagCTCCGAGGG
CGCTCACCTTTGTCCCGTCCGGATGGGACACGCCCGAACTCGTGCAAAAG
CTTCTCTCCCCGCAGGCCGTACCCTGGCCACCATCTTTGACATTTTCTGA
GATTTTTGTTCCGCCCAAAGGAGCGCGGGCCTACCTGGAccgtggagatg
gaggggccGAGGTCTGCAGCGAGACTTGGGAGCAGGAGAGCAGCGAAAGG
CACACAGAAATCACTCCTACACAGGCCTGGCTCGAACGACTATgggaaca
gcagcagcagcaacgacAAAGGTGTCCTCAAAATCTCGGAGACGGTGACT
GCGGTAGGACAATGGCTGGAGAGGCTGACGGCAGCGCTGGAAATCATGAC
GCTGGAGGGCTAAGAGAGGGGCCGATGGGATCTActgggaaaggcaggag
caCTCGGTATGGGAACAGCAATCGAAGCATTGGAGAAGCCAATCAACGAT
CGGAGCCCTACAATGCCGGTGGTGGGGCCGACAAGGCAGAGATCCGCAAC
TTTTTCGAGGGGCTTTTggccggcggagggaagaaatgaGCATTTGCTCA
GGAGTTCGTACAAGAAAGCGAACGTATTACCAAAAAACAAAAATAAGAAG
GGGCGAGACCTCG back to topCoding sequence (CDS) from alignment at CM002462.1:857466..859428+ >rna4103 ID=rna4103|Name=rna4103|organism=Nannochloropsis gaditana|type=CDS|length=1824bp|location=Sequence derived from alignment at CM002462.1:857466..859428+ (Nannochloropsis gaditana)
ATGTCGGCAGGTGAAAATGCTGGGGTAGCACAGCGGGAAACAGAGCTTAT
TTGGGGGCCCTTGCTTGCGGAAGCAGCTCGTTCGGAGCAGTCGAACTTCA
CCCCTGGCACGATTCTTTTTCTAGGCGACGCAGCTGTAGGGAAAACTCGG
TTGATTGACCGCTTCATCACAAGCTACGATGCCTTGGAAAGGCAGGCGGC
AGCGACCGGAAGAAATTTTAttgccgaggaggagaaggaggacgaggaag
gccaggaggggagcggggccCTATCATCGCACGATCACTCTCTGCTCTCT
TacgcctttttccctgcaATCGACCCCGTGGGATGCAAAGCAGGTGGACA
ATCGTGGGATAATGGCACAGTAGGAAGGTCTTCGGATTGTCTACCGGGTA
GATGCCCGGCTGGGGCTTCAAaagggctggcggaggacgaccaAGACGCC
GGCGTAGATGAGAACGAAATGGATGCAGGAGCCCGCGTAAACGTCTGGTC
CCTGAGCGACCCTGCTCTCAAGGATCTATTGCACGTTGCGCTGGATGATC
CTGGAGTACGCCGCAGAGCTGCAAGCATAAGAAGTGAGGTTCCGACCGAC
CCGCGCTTTGACACCAGCAGCCTAAACAGCAAGAGCACCCCTGCTCAGAC
GTTACAGCGGACAATTTGCATGATTGCGATAGATTTGACCCGGCCCTGGG
CATGTGAATCGGCGCTGGAGCGATGGGTTGGTGTGTTGAGAAGTGTATTG
GGAGAGAAGGCCCGTGCAGGGTGtcacaagggagaggaggagggagagga
agagagggtacGGAAAGCACGCTTGGTGGCCTATCTGAGCAGATGCTACC
AAGGCGAGGACATGGATAGGGTTTGGTTGGAGCGTGGCgaattgaaggag
gaggatgaggggggaggcctgGAGGAACCTAAAGTTGTGTTCCGGATCAA
CAGAATGGAGTCGAGTGGAGGCCGTCCTCTGTCGTCCCCTCAACCCGCTC
GCTCTACCCCACTACCAGCGGGCGTGCTTGAAGAAAATCTGGGTGTGCCT
TTGGTCGTTGTGGGCCTCAAAGCTGACCTTGCGCCCGTGCCGGACTCTTA
CGACGATGGGCTCCGcagcctctttttccaacAATACCTCCGTCGCGTCT
GCCTCAAATATGGCGCCTCGCTCGTCTATACCTCGGCTAGCAACGGGGAc
aactgcctcctccttcagcgcTACCTTCTTCATCGCCTCTACCCTGagca
tttctccttcctcctccccgtccaagCTCCGAGGGCGCTCACCTTTGTCC
CGTCCGGATGGGACACGCCCGAACTCGTGCAAAAGCTTCTCTCCCCGCAG
GCCGTACCCTGGCCACCATCTTTGACATTTTCTGAGATTTTTGTTCCGCC
CAAAGGAGCGCGGGCCTACCTGGAccgtggagatggaggggccGAGGTCT
GCAGCGAGACTTGGGAGCAGGAGAGCAGCGAAAGGCACACAGAAATCACT
CCTACACAGGCCTGGCTCGAACGACTATgggaacagcagcagcagcaacg
acAAAGGTGTCCTCAAAATCTCGGAGACGGTGACTGCGGTAGGACAATGG
CTGGAGAGGCTGACGGCAGCGCTGGAAATCATGACGCTGGAGGGCTAAGA
GAGGGGCCGATGGGATCTActgggaaaggcaggagcaCTCGGTATGGGAA
CAGCAATCGAAGCATTGGAGAAGCCAATCAACGATCGGAGCCCTACAATG
CCGGTGGTGGGGCCGACAAGGCAGAGATCCGCAACTTTTTCGAGGGGCTT
TTggccggcggagggaagaaatga back to top
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