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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100001g33.8173.mrna |
| Orig protein id | gnl|cribi|Naga_100001g33.8173 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:805341..806825 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4079 ID=rna4079|Name=rna4079|organism=Nannochloropsis gaditana|type=mRNA|length=1875bp
ATGGTCTTGCAGCGCGGAGTCAATTTTGTATTGAATCAACTTTTGCTCCG
TCACGTGGATCCCGCTGTGTTTGGGCTCGCCTCCGTGCCTCTTGACCTGC
TCTTGAATACGGCGCTTTTTCTCTCCCGTGAGGGTTTCCGGTTGACGTTG
GGTCGAACCACTCTTGTTGGATTGTCGTCCGACACGTGTGAATTTCGTCA
ATTCGTAAACTTAAGCTGGGTGCCTGTCTTACTGGGACCTTTGGTGTCCC
TGCTTTCTTTGGCCTTTTTACCCTCTAACCACAACGAAGACATCGGTGGT
AAAGGACAAAACGCAGATGCACTACGGCAAACTGGGCTTCTGTTTTGCCT
AGCAGCCTCTTTAGAAAGCCTGAGTGAGCCTGCTTATCTAGTCTGCCAGG
GATGTCTCCTAACAACGCTTCGATCGGCCTCGGAGGGACTGGCGACATTA
ATCCGCTCGATCATAACGTTTGTGCTGCTTGTTTGGGTGCTACCACCTGA
AAAAGCGCTTTTAGCCTTCGGTTTCGCCCAGGTCGGATACTCTGTTGTTT
TGATCCTCGTTTATTGGGGCTACCTCATCTACGTGAGTCTGAAGGGGGGA
GGTCAAACAGGAATTCCGGGAGCATCAAAGGAGGCAGCTATGGATACCAC
ATCCACCAGTCAAACCACCCAAACGCCACTACGCCTCCTTGCCCTCTCCC
ACCTGCTCCCTAGAGCCCCTTCTTCCTCCTCCGCACTTTGGGTGGAGCCG
TCACACTTGGCGCTCGCTTTCGCGCTGACAGGGCAGTCTTTCTTCAAGCA
CCTGCTCACCCAAGGCGACAAAATCGTTCTCTCCATTGGCAGCTCGCATT
ACTCGCAAGGTCTCTATGCCTTGGCGCAGAACTACGGCTCTTTGGCAGCA
AGGTTGCTGTTCCAACCCTTAGAAGAGAGCGGGCGGCTCATGTTCGCCAG
GCTGGCCGCAGGGAATGGTGGGGTCGTGGGGGAGGACGGGGCCGAAGCAG
CCGATGATAAGAAAAAGAAAAAGACGGAAACTTCTGTGGCTACTGATCAT
CGACGGGGAAGGGGGGCAGAGCCGGGAGAGTCTGCCGCTTCGCAGGCCAT
GCTAAAGGTCCTCGTCGGCGCCTTGGTCAAAACCGTCATCCTCGTGGGCC
TCGTCTTTGCCTGCTTCGGCTTCAACTACACGCGCGTCCTCCTCCGACTT
CTCCTCCCCGGGAGGCGGTGGGAGACAGGGGCAGGAGTAGGGGCCGAGGG
CAGCGGCGAGGTCCTCTCCTGGTACTGCCTGTACGTGCTCTTTCTCGCAG
TGAATGGGATGACGGAGGCCTTTGTGTACGCCGTGGCCACACAACAGGAT
GTGGTACGTTTGGGTGCCTTGGCAGCCGTTTCGTTCGCGGTTTTTGCCGG
CCTGACATTCCCTTTCATTCGATGGCACGGAACGGTCGGGTTGGTGTTGG
CAAATTGTGCGGGGATGCTGGTGCGAATCTTGTTCAGTATACACTTCGTA
AGGGCCTACTTCGACGGCGTCGTGTCGACGCGGAAGCAGGACGGAGGGGA
GGGGCATGTTTCGTCCACGATGCTTTCGACAAGAGAAAAACAACCAGACA
TGTTTCCCCACCCAGTAGTGCTCGCGTCATTTGTGGCCGCCTTTGCTGCG
ACCTATGCTTCAGATAAGACGTTGGTGTCAGTAGATGAAGTGGAGCCTGT
TTTGAAGCATGTGGTGTTCGGCGGGATGGTTTTTACAGGAGTACTAGGTT
CTATATTGTGGACAGAACAAGATTTTTTTGAGGATTTGAAAAGTATACGG
AGATTGGCGACAGGCAGGAGGGAGGAAGCTGGATCAAAAGCGAAATCGGG
GTTGGAGGGCAAGAAGGGGGCGTGA back to topprotein sequence of rna4079 >rna4079-protein ID=rna4079-protein|Name=rna4079|organism=Nannochloropsis gaditana|type=polypeptide|length=468bp
MARRSHWLYEWFFIAALGSNWLQSHAGRWGDARLQAATLKPRSLLIRDAR
YSASNYRRASSHRLAFHLWGKHHEHEGRALERSTVWQRFSNTTGDATNSS
STTIQQLGSFSTRKNPVFGILSQEDLALDKVEQCVCRCWGQCKPFVSTAA
KALAGGTMCLFGAHYARCAVVFHTMRVTGWPAFHKAVQELFRSYSAAREV
VKSEVSKVVRPGELFRAVSYELKSVHFLIKESQKKLEDGYLSRMEAMEII
RRAQIDKKRLEYEAWCLNQALDSVAALGAAIDLTRLREAGKGLYTGALAC
FASSSSMTVCKLSLAFDLGGILANNLSCVCATLMSRWHSKELARILPPET
RRFIKLSFQIMGAIQGLLIVNTVLPKVSLRISSAALGAAWLTDAITEICD
PWIQAHDGWNPMANHLPYAVLQVGLTIGGYYVQKTVYPGKIPLIVERVLS
PLAFFEKRLNYLNSMFAK back to topmRNA from alignment at CM002462.1:805341..806825- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna4079 ID=rna4079|Name=rna4079|organism=Nannochloropsis gaditana|type=mRNA|length=1485bp|location=Sequence derived from alignment at CM002462.1:805341..806825- (Nannochloropsis gaditana)
ATGGCCCGACGGTCGCACTGGCTGTACGAGTGGTTCTTTATTGCCGCCTT
AGGTTCGAACTGGCTCCAAAGTCATGCAGGGCGATGGGGTGACGCAAGAT
TACAGGGTAAGTCTATCTCATGGGATAAAGTGCCTCCTGCGACAACTCAT
ATCCCCCGCTCGTTCCACCACCTTTCCCCCACAGCTGCCACACTCAAACC
ACGCTCATTACTTATCCGTGACGCAAGATACTCAGCATCAAATTATCGTC
GAGCTTCTAGTCACCGTCTGGCTTTCCATCTATGGGGCAAACACCACGAG
CACGAAGGCAGGGCTTTGGAGCGCTCGACTGTTTGGCAGCGCTTCTCGAA
TACCACAGGCGACGCTACCAATTCAAGCTCTACCACCATCCAGCAATTGG
GCTCCTTTAGTACGCGAAAAAATCCCGTGTTCGGAATTCTCTCCCAGGAG
GACCTTGCACTTGACAAAGTCGAGCAATGCGTGTGCAGATGTTGGGGGCA
GTGCAAGCCCTTTGTCTCAACCGCCGCCAAGGCCTTGGCCGGTGGAACTA
TGTGCCTGTTTGGGGCTCATTACGCGCGGTGTGCCGTCGTTTTTCATACC
ATGCGTGTCACTGGATGGCCTGCTTTCCATAAAGCGGTGCAGGAGCTTTT
CAGAAGCTACAGTGCCGCCCGCGAGGTGGTGAAGAGCGAAGTCAGTAAGG
TCGTGCGACCTGGCGAGCTCTTTAGGGCCGTCTCCTACGAGCTGAAAAGT
GTTCACTTTCTCATCAAGGAGTCTCAAAAGAAACTTGAAGACGGATATCT
GAGTCGGATGGAGGCGATGGAAATTATACGGCGGGCGCAAATTGACAAGA
AGCGCTTGGAGTACGAGGCCTGGTGCCTTAATCAGGCCCTGGATTCGGTC
GCGGCCCTGGGAGCAGCCATCGACTTAACAAGACTCCGGGAGGCAGGAAA
GGGTCTATATACTGGCGCGCTTGCATGTTTCGCGTCTTCCAGCAGCATGA
CTGTCTGCAAACTGTCTCTTGCTTTCGACTTGGGTGGTATTCTTGCAAAC
AACTTGAGTTGTGTATGCGCGACGTTGATGAGCCGGTGGCACTCCAAAGA
ACTTGCCCGCATCCTTCCGCCAGAGACTCGTCGATTTATAAAGTTGTCCT
TTCAGATCATGGGAGCTATTCAAGGTCTTCTCATTGTAAATACTGTGCTG
CCAAAGGTCAGCTTGCGCATTTCCTCCGCTGCTTTGGGCGCTGCCTGGTT
AACTGATGCAATCACTGAGATATGCGATCCTTGGATTCAGGCTCATGATG
GGTGGAATCCAATGGCAAATCACCTGCCATATGCTGTTTTACAAGTTGGA
CTGACGATAGGAGGATACTATGTGCAAAAAACTGTTTATCCGGGCAAAAT
TCCCTTGATAGTGGAGCGTGTCTTATCCCCATTAGCATTTTTCGAGAAGC
GCCTGAATTACCTCAACTCAATGTTTGCCAAATGA back to topCoding sequence (CDS) from alignment at CM002462.1:805341..806825- >rna4079 ID=rna4079|Name=rna4079|organism=Nannochloropsis gaditana|type=CDS|length=2814bp|location=Sequence derived from alignment at CM002462.1:805341..806825- (Nannochloropsis gaditana)
CTGCCACACTCAAACCACGCTCATTACTTATCCGTGACGCAAGATACTCA
GCATCAAATTATCGTCGAGCTTCTAGTCACCGTCTGGCTTTCCATCTATG
GGGCAAACACCACGAGCACGAAGGCAGGGCTTTGGAGCGCTCGACTGTTT
GGCAGCGCTTCTCGAATACCACAGGCGACGCTACCAATTCAAGCTCTACC
ACCATCCAGCAATTGGGCTCCTTTAGTACGCGAAAAAATCCCGTGTTCGG
AATTCTCTCCCAGGAGGACCTTGCACTTGACAAAGTCGAGCAATGCGTGT
GCAGATGTTGGGGGCAGTGCAAGCCCTTTGTCTCAACCGCCGCCAAGGCC
TTGGCCGGTGGAACTATGTGCCTGTTTGGGGCTCATTACGCGCGGTGTGC
CGTCGTTTTTCATACCATGCGTGTCACTGGATGGCCTGCTTTCCATAAAG
CGGTGCAGGAGCTTTTCAGAAGCTACAGTGCCGCCCGCGAGGTGGTGAAG
AGCGAAGTCAGTAAGGTCGTGCGACCTGGCGAGCTCTTTAGGGCCGTCTC
CTACGAGCTGAAAAGTGTTCACTTTCTCATCAAGGAGTCTCAAAAGAAAC
TTGAAGACGGATATCTGAGTCGGATGGAGGCGATGGAAATTATACGGCGG
GCGCAAATTGACAAGAAGCGCTTGGAGTACGAGGCCTGGTGCCTTAATCA
GGCCCTGGATTCGGTCGCGGCCCTGGGAGCAGCCATCGACTTAACAAGAC
TCCGGGAGGCAGGAAAGGGTCTATATACTGGCGCGCTTGCATGTTTCGCG
TCTTCCAGCAGCATGACTGTCTGCAAACTGTCTCTTGCTTTCGACTTGGG
TGGTATTCTTGCAAACAACTTGAGTTGTGTATGCGCGACGTTGATGAGCC
GGTGGCACTCCAAAGAACTTGCCCGCATCCTTCCGCCAGAGACTCGTCGA
TTTATAAAGTTGTCCTTTCAGATCATGGGAGCTATTCAAGGTCTTCTCAT
TGTAAATACTGTGCTGCCAAAGGTCAGCTTGCGCATTTCCTCCGCTGCTT
TGGGCGCTGCCTGGTTAACTGATGCAATCACTGAGATATGCGATCCTTGG
ATTCAGGCTCATGATGGGTGGAATCCAATGGCAAATCACCTGCCATATGC
TGTTTTACAAGTTGGACTGACGATAGGAGGATACTATGTGCAAAAAACTG
TTTATCCGGGCAAAATTCCCTTGATAGTGGAGCGTGTCTTATCCCCATTA
GCATTTTTCGAGAAGCGCCTGAATTACCTCAACTCAATGTTTGCCAAATG
AATGGCCCGACGGTCGCACTGGCTGTACGAGTGGTTCTTTATTGCCGCCT
TAGGTTCGAACTGGCTCCAAAGTCATGCAGGGCGATGGGGTGACGCAAGA
TTACAGGCTGCCACACTCAAACCACGCTCATTACTTATCCGTGACGCAAG
ATACTCAGCATCAAATTATCGTCGAGCTTCTAGTCACCGTCTGGCTTTCC
ATCTATGGGGCAAACACCACGAGCACGAAGGCAGGGCTTTGGAGCGCTCG
ACTGTTTGGCAGCGCTTCTCGAATACCACAGGCGACGCTACCAATTCAAG
CTCTACCACCATCCAGCAATTGGGCTCCTTTAGTACGCGAAAAAATCCCG
TGTTCGGAATTCTCTCCCAGGAGGACCTTGCACTTGACAAAGTCGAGCAA
TGCGTGTGCAGATGTTGGGGGCAGTGCAAGCCCTTTGTCTCAACCGCCGC
CAAGGCCTTGGCCGGTGGAACTATGTGCCTGTTTGGGGCTCATTACGCGC
GGTGTGCCGTCGTTTTTCATACCATGCGTGTCACTGGATGGCCTGCTTTC
CATAAAGCGGTGCAGGAGCTTTTCAGAAGCTACAGTGCCGCCCGCGAGGT
GGTGAAGAGCGAAGTCAGTAAGGTCGTGCGACCTGGCGAGCTCTTTAGGG
CCGTCTCCTACGAGCTGAAAAGTGTTCACTTTCTCATCAAGGAGTCTCAA
AAGAAACTTGAAGACGGATATCTGAGTCGGATGGAGGCGATGGAAATTAT
ACGGCGGGCGCAAATTGACAAGAAGCGCTTGGAGTACGAGGCCTGGTGCC
TTAATCAGGCCCTGGATTCGGTCGCGGCCCTGGGAGCAGCCATCGACTTA
ACAAGACTCCGGGAGGCAGGAAAGGGTCTATATACTGGCGCGCTTGCATG
TTTCGCGTCTTCCAGCAGCATGACTGTCTGCAAACTGTCTCTTGCTTTCG
ACTTGGGTGGTATTCTTGCAAACAACTTGAGTTGTGTATGCGCGACGTTG
ATGAGCCGGTGGCACTCCAAAGAACTTGCCCGCATCCTTCCGCCAGAGAC
TCGTCGATTTATAAAGTTGTCCTTTCAGATCATGGGAGCTATTCAAGGTC
TTCTCATTGTAAATACTGTGCTGCCAAAGGTCAGCTTGCGCATTTCCTCC
GCTGCTTTGGGCGCTGCCTGGTTAACTGATGCAATCACTGAGATATGCGA
TCCTTGGATTCAGGCTCATGATGGGTGGAATCCAATGGCAAATCACCTGC
CATATGCTGTTTTACAAGTTGGACTGACGATAGGAGGATACTATGTGCAA
AAAACTGTTTATCCGGGCAAAATTCCCTTGATAGTGGAGCGTGTCTTATC
CCCATTAGCATTTTTCGAGAAGCGCCTGAATTACCTCAACTCAATGTTTG
CCAAATGAATGGCCCGACGGTCGCACTGGCTGTACGAGTGGTTCTTTATT
GCCGCCTTAGGTTCGAACTGGCTCCAAAGTCATGCAGGGCGATGGGGTGA
CGCAAGATTACAGG back to top
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