EWM26662.1, cds4069 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM26662.1 vs. NCBI_GenBank
Match: gi|585108750|gb|EWM26662.1| (hypothetical protein Naga_100001g33 [Nannochloropsis gaditana]) HSP 1 Score: 969.148 bits (2504), Expect = 0.000e+0 Identity = 468/468 (100.00%), Postives = 468/468 (100.00%), Query Frame = 0
Query: 1 MARRSHWLYEWFFIAALGSNWLQSHAGRWGDARLQAATLKPRSLLIRDARYSASNYRRASSHRLAFHLWGKHHEHEGRALERSTVWQRFSNTTGDATNSSSTTIQQLGSFSTRKNPVFGILSQEDLALDKVEQCVCRCWGQCKPFVSTAAKALAGGTMCLFGAHYARCAVVFHTMRVTGWPAFHKAVQELFRSYSAAREVVKSEVSKVVRPGELFRAVSYELKSVHFLIKESQKKLEDGYLSRMEAMEIIRRAQIDKKRLEYEAWCLNQALDSVAALGAAIDLTRLREAGKGLYTGALACFASSSSMTVCKLSLAFDLGGILANNLSCVCATLMSRWHSKELARILPPETRRFIKLSFQIMGAIQGLLIVNTVLPKVSLRISSAALGAAWLTDAITEICDPWIQAHDGWNPMANHLPYAVLQVGLTIGGYYVQKTVYPGKIPLIVERVLSPLAFFEKRLNYLNSMFAK 468
MARRSHWLYEWFFIAALGSNWLQSHAGRWGDARLQAATLKPRSLLIRDARYSASNYRRASSHRLAFHLWGKHHEHEGRALERSTVWQRFSNTTGDATNSSSTTIQQLGSFSTRKNPVFGILSQEDLALDKVEQCVCRCWGQCKPFVSTAAKALAGGTMCLFGAHYARCAVVFHTMRVTGWPAFHKAVQELFRSYSAAREVVKSEVSKVVRPGELFRAVSYELKSVHFLIKESQKKLEDGYLSRMEAMEIIRRAQIDKKRLEYEAWCLNQALDSVAALGAAIDLTRLREAGKGLYTGALACFASSSSMTVCKLSLAFDLGGILANNLSCVCATLMSRWHSKELARILPPETRRFIKLSFQIMGAIQGLLIVNTVLPKVSLRISSAALGAAWLTDAITEICDPWIQAHDGWNPMANHLPYAVLQVGLTIGGYYVQKTVYPGKIPLIVERVLSPLAFFEKRLNYLNSMFAK
Sbjct: 1 MARRSHWLYEWFFIAALGSNWLQSHAGRWGDARLQAATLKPRSLLIRDARYSASNYRRASSHRLAFHLWGKHHEHEGRALERSTVWQRFSNTTGDATNSSSTTIQQLGSFSTRKNPVFGILSQEDLALDKVEQCVCRCWGQCKPFVSTAAKALAGGTMCLFGAHYARCAVVFHTMRVTGWPAFHKAVQELFRSYSAAREVVKSEVSKVVRPGELFRAVSYELKSVHFLIKESQKKLEDGYLSRMEAMEIIRRAQIDKKRLEYEAWCLNQALDSVAALGAAIDLTRLREAGKGLYTGALACFASSSSMTVCKLSLAFDLGGILANNLSCVCATLMSRWHSKELARILPPETRRFIKLSFQIMGAIQGLLIVNTVLPKVSLRISSAALGAAWLTDAITEICDPWIQAHDGWNPMANHLPYAVLQVGLTIGGYYVQKTVYPGKIPLIVERVLSPLAFFEKRLNYLNSMFAK 468
BLAST of EWM26662.1 vs. NCBI_GenBank
Match: gi|553194679|ref|XP_005856013.1| (hypothetical protein NGA_2076900 [Nannochloropsis gaditana CCMP526] >gi|422293049|gb|EKU20350.1| hypothetical protein NGA_2076900 [Nannochloropsis gaditana CCMP526] >gi|585108790|gb|EWM26702.1| hypothetical protein Naga_100001g111 [Nannochloropsis gaditana]) HSP 1 Score: 188.348 bits (477), Expect = 3.020e-50 Identity = 89/250 (35.60%), Postives = 155/250 (62.00%), Query Frame = 0
Query: 151 KALAGGTMCLFGAHYARCAVVFHTMRVTGWPAFHKAVQELFRSYSAAREVVKSEVSKVVRPGELFRAVSYELKSVHFLIKESQKKLEDGYLSRMEAMEIIRRAQIDKKRLEYEAWCLNQALDSVAALGAAIDLTRLREAGKGLYTGALACFASSSSMTVCKLSLAFDLGGILANNLSCVCATLMSRWHSKELARILPPETRRFIKLSFQIMGAIQGLLIVNTVLPKVSLRISSAALGAAWLTDAITEICD 400
K G +M L+G H++ V HT+RVTG P +A E Y AR +K E ++ +L +AV YE++S L+ ES + +DG ++ EA E +R+A+++ + L ++W LNQA S+ A+ AAID ++++ G+YT ALACFA++SS T+ LS+ FDL +++ ++ + R E+ + LP ET++ + ++ ++ ++GL++V+ V+P+++L ISS+ALGA W+TD + ++ D
Sbjct: 143 KGCVGLSMVLYGMHFSHLVVFIHTLRVTGLPVMQRAWNEFVDMYGTARRTIKREYPNMLHTKKLLQAVHYEIQSTRKLLHESAEAAKDGKVTESEAREAVRKAKLNLRELNEKSWILNQAFSSMHAVAAAIDFVKIKDLFSGIYTSALACFATASSSTLRGLSIGFDLASLISQHIDHAVQAVAERIPRLEVLQYLPRETQKLLGMTVSLVSVLKGLIVVHFVVPRLTLVISSSALGALWVTDMLVDVMD 392
BLAST of EWM26662.1 vs. NCBI_GenBank
Match: gi|299117435|emb|CBN73938.1| (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 64.3142 bits (155), Expect = 1.782e-7 Identity = 70/304 (23.03%), Postives = 138/304 (45.39%), Query Frame = 0
Query: 155 GGTMCLFGAHYARCAVVFHTMRVTGWPAFHKAVQELFRSYSAAREVVKSEVSKVVRPGELFRAV-SYELKSV-HFLIKESQKKLEDGYLSRMEAMEIIRRAQIDKKRLEYEAWCLNQALDSVAALGAAIDLTRLREAGKGLYTGALACFASSSSMTVCKLSLAFDLGGILANNLSCVCATLMSRWHSK-ELARILPPETRRFIKLSFQIMGAIQGLLI----------VNTVLPKVSLRISSAALGAAWLTDAITEICDPWIQAHDGWNPMA-NHLPY-AVLQVGLTIGGYYVQKT-VYPGKIP 442
G ++ +G + A R+ G +AV+EL Y++AR ++ GE R V +L++ +I+E ++ L DG+LS + +++ + + +++ E A SV +L +++ + R + G+Y +ACF +S+ T + +L +G +L ++ + ++ + +L+ E ++ + MG + + + V V P V+L++S G +TD + +P A M H P+ AV+ GLTI GYY ++ +Y +IP
Sbjct: 36 GLSLLFYGMAFRTFAFHVIVFRIAGMKQVQRAVRELVGKYASARRSIREAAEAAETVGE--RVVKGDDLQAARERMIEEKKRLLSDGFLSERDTTYFMKKYRAELLKIKEEQELFQSARSSVLSLRSSVGPRQARSSFNGVYNALIACFTASTIQTAGQFTLGLHIGNLLKTHVLDLFGPIIDPIGYRLDLSPYFDEEDIPYMGKA-NAMGGPRNMALNILCYSVVFAVFRVHPSVALKLSMVYYGGRVVTDYVVLFTEP---ARRKLGQMTIVHTPWSAVIHAGLTILGYYCHRSALYTAEIP 333 The following BLAST results are available for this feature:
BLAST of EWM26662.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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