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Properties
| Property Name | Value |
|---|
| Product | porphobilinogen deaminase |
| Orig transcript id | gnl|cribi|Naga_100003g83.1838.mrna |
| Orig protein id | gnl|cribi|Naga_100003g83.1838 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:997830..999956 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna403 ID=rna403|Name=rna403|organism=Nannochloropsis gaditana|type=mRNA|length=1638bp
ACATAGGAGATTGCAGTGTTAGCCTCAACGATCGGGAAAAAATCCAATCT
TTGGGGGCAAGGCGAGATGAAGTTCCGCTTGGCATCTGCGACAGCAGTAA
CTATCCTGTCGGTGCTTGGGCTCTCTCCTTTTCATCTCGTTAAACACACA
CAGAAAATGCGGAGGCATTTCTGAAGGCTTTGTTTGTCCAGGCGTCCGAT
CGCGGTTCTACCAATGGACGCCTTCGAAATCGAGGAGCGAGGGGGAGGTA
AAAGCAAACGTCTTTCTTGTGGGCAGAAGAAGAAGAGTGTCCATAGCTAG
AAGCATAGATTGGTTTCTATTTTCCCAAGATGGGGAGGAAGGGGGTAGCC
AGAGGCTTCAGAAGACTACTACCAAGTCCAAACGGAAAAAGAGCGAGAAA
GAGGAGGAGGATGACTTGGAAGTATTTCTGGCTTCACTGGATACAGAAGC
TGAAAATGTAAGGCAAGATTACAATGTTGACATGGAGGACTATGACGACG
ACGAGGAACTTTCCGATCAACATAGAGCCATGCTGGCCGCACCAGCCAAG
AAGCTGGACGAGTTGCTGAAAGATGCAGGAATTGAATTTGGAGACCCGAC
GTTGATGGAAGATGACCAGGGGTCCGAAGGATTTCGCGCTGGTTTTGTTA
GCATTATCGGCAGCCCCAATGTGGGGAAATCCACGTTGATGAACTCCTTG
GTGGGGGAGCGTGTCTCTATCGTCACTTCGAAGCAACAGACGACACGGCA
CCAAATTATGGGGGTTGTGACAGGAGAAGACTTTCAGATTGTGTACTACG
ATACACCGGGAGTGCTACGGCCCAACTATAAGCTACAAGAGGGGATGATG
GCTTTCGTCAAAGAGAGCTTGGGCGACGCGGACGTGGTGCTCCTGATGAC
GGACGTCTTCGAGGACCCTCGAGACTTTCCTGATCAACAAATATTTGAGC
ACATGCAGCAGTCGCGACGACCGCTCCTGTTGGCCGTCAACAAGATCGAC
CTTTTGCCCAATGCCACGCATCCTCAGGGCAATTTGGGGAAGGATGCGCT
CGAGCGAGTTGGCACCCTCCAAGACGTAGTGGCCCGATGGCAGGCGGCGT
TGCCGAACGCGAGCATCATTCCTATTTCAGCCCGAGAATATTTCAATTTG
GATGAGCTTTTGGCGTCATTGAAAGAGGAATTGCCCCCGTCTCCGCCCCT
ATATCCAAATGATACACTGACAGACAAACCTCAGCGCTTTTTCGCATCTG
AACTCATCCGCGAAAAACTGTTCACATCTTACAGTAAAGAGATCCCCTAC
TCTTGCGAGGTATCTGTAACAGGATTCAAAGATCAAGGGAGACTCATTAA
AATCAACTCCACCATATTCACCACTCGGGACTCACATGTCCCTATACTGA
TCGGGACCAAGGGCAGTAAATTGAAAGAGGTGGGCACCCAAGCGCGGCTA
GACCTAGAAAATTTCTTTGGCAAGAAAATTTATCTAGAGATGCGAGTCAA
GGTCCGCAAAGATTGGCGAAGTAATTTGAAAGACTTGTCTGCATTTGGGT
ACATGCAGCAGGGGGGGGAAACAGAGAATACCAAGATCTGAAATATGATG
CGCGTCAAAGTAACAAAATCAATGTCAGCGATTGAAGG back to topprotein sequence of rna403 >rna403-protein ID=rna403-protein|Name=rna403|organism=Nannochloropsis gaditana|type=polypeptide|length=364bp
MPCIRKIVGIFALLPIMAGAFFLPGVSPQRNTALRMAAEAGGAKPVRIGT
RGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEI
GGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRD
VFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRL
RKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCR
SDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDK
LHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKAL
YAALPAPTPKPAVA back to topmRNA from alignment at CM002455.1:997830..999956+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna403 ID=rna403|Name=rna403|organism=Nannochloropsis gaditana|type=mRNA|length=2127bp|location=Sequence derived from alignment at CM002455.1:997830..999956+ (Nannochloropsis gaditana)
agggggggaagtcTTGACCCGAGGTCGGGCAGATTATAATTGGGCACCAG
CCACCCACAACAGCCATGGGGAGCTTGGAAGACGCGTATGTATTGCTGTC
GCCCCATTCACACCCAAAAGAAAAGCGCGCGCTTTTCTTCGAGACGGGCG
TGGCTGTATGCCCACAGAGAGCAAAGAGGTTGGGGCGGGGAGCCGCTTGT
TGACTTTGACCTGTTGCAGCAACATCTTCCGTCGCGACCTTCCAGGCCAG
ACTTTTCTCATAAAATTCAGGTGGCCGAAGGGGTCATTATTCAATATGTC
AGCTCTTTAATTAACAACTTGCTGACTTAATTTTTTGCTCATCCTACGGT
TCGGTTTGCTGTAGTGAAAAAGACAAACTAAAGATACCGTCAAggccgtc
ccctccttgatctcCTACATATTCCTTTTGCCTGCCACATAGTCCAACAG
GTCTATCCACAGGAGCTACTTTCATTGTTTACGTACAAATAATGCCCTGT
ATTAGAAAGATTGTAGGCATCTTCGCGTTGCTGCCCATCATGGCCGGTGC
ATTTTTCCTACCAGGTACGAGAAGAAGATCAGGGAAATACTtttggggag
gaggcaaggggctTAACGCGCACTTGAGATGTAATTGAACAGCTGAAATC
AGCGCATGAGGCTGATTACCGAATGATATTTGCTGAGATTGTGTACAGTT
ATTGTTGGCTCGTTTAtggtgggaaaagagagtGAACTTGTAAATGGCCA
GCTTGCACACGATCCGTTGATCTTTATTTACCATGTGGTTACTGGTATTT
TATCAATCGTGAACGCGACTATTTATTGCAGGCGTATCACCACAACGAAA
CACTGCTCTGCGCATGGCTGCGGAAGCGGGAGGTGCGAAGCCAGTCCGAA
TTGGGACGCGGGGCTCGCCCTTGGCTCTGGCGCAGGCATACGAGACAAAG
CGGAGGCTCGGCGAGGCCTTTCCAGAGCTGGCTCCTGAGGGGATGGTCGA
GATAAAGATCATCAAAACCACTGGAGACATGATTTTGGACAAGGCTTTGT
CAGAGATCGGCGGCAAGGGTCTCTTTACCAAGGAGCTGGACGTGGCACTG
CTCGGCGACGAGGTGGACATTTGCGTTCACTCCATGAAGGACGTTCCGAC
CTGGCTCCCTGACGGCACGGTGCTGCCCTGCAATTTACCCAGAGAAGACT
CGCGTGATGTTTTTATCTGCAACAAAGCCAAGTCGATCGCGGAGCTCCCG
GCGGGGTCGGTCATCGGGTCAGCCTCCTTGCGGCGTCAAGCGCAGATCCT
TGCCCGCAATCCGAACGTCAAAGTCGTCAATTTTCGAGGCAATGTCCAGA
CCCGTCTACGCAAACTCAGTGAAGGAGTGGTGGATGCTACCATGTTGGCG
GTCGCGGGTTTGAATAGAATGAACATGCAGGATTGTGTCACGAGTATACT
CGACTGGGACGAGATGCTGCCCGCGGTGGCCCAAGGCGCCATCGGCATTC
AATGCCGCTCTGATGACGCAACTTCCCTCAAATATCTCGCAGCATTGAAT
CATCCCGAAACAAAAGTTTGCGTGGACTGCGAGCGGAGCTTCTTGGCCGA
GTTGGACGGGAACTGCAAGACCCCTATCGCGGGGCAGGCGCGGGTGATCG
AGGACAAATTGCACTTCAAGGGCCTCGTGGCCATGCCTGATGGCACGCAA
ATGTTTGAAACGGAGAAGGTTGGCGCATTGGCTGACGCGGTCAAGATTGG
AAGGGAGGCTGGAGAGGACTTGAAAGAGCAGGCAGGTCCTGAATTTTTCA
AGGCGCTCTACGCGGCGTTGCCGGCGCCAACACCAAAGCCTGCAGTCGCC
TAGAAAGGCGCATTTTGACATAAAAGAGATGGGACAGAAGAGATGAAGGA
AAGATGGGCGGTGAAGAACATATCATATACAGCTTGTCCGACTGCTGCAA
AGAGAATCTGCTACACGCGGAGAGGCAAGAGCCACCTGTCGCCTACATTG
ACTTGCATCGCTGGtgtggcggaggggaaagtgtGCAACTTAAAAGAGAT
CTCTTCTCAAAAAGAAAAGCTACTCAACTCCTACCTATACAAGCATGACA
AGAAGCGGCGCTACGAATAAGCTTCAC back to topCoding sequence (CDS) from alignment at CM002455.1:997830..999956+ >rna403 ID=rna403|Name=rna403|organism=Nannochloropsis gaditana|type=CDS|length=2190bp|location=Sequence derived from alignment at CM002455.1:997830..999956+ (Nannochloropsis gaditana)
ATGCCCTGTATTAGAAAGATTGTAGGCATCTTCGCGTTGCTGCCCATCAT
GGCCGGTGCATTTTTCCTACCAGGCGTATCACCACAACGAAACACTGCTC
TGCGCATGGCTGCGGAAGCGGGAGGTGCGAAGCCAGTCCGAATTGGGACG
CGGGGCTCGCCCTTGGCTCTGGCGCAGGCATACGAGACAAAGCGGAGGCT
CGGCGAGGCCTTTCCAGAGCTGGCTCCTGAGGGGATGGTCGAGATAAAGA
TCATCAAAACCACTGGAGACATGATTTTGGACAAGGCTTTGTCAGAGATC
GGCGGCAAGGGTCTCTTTACCAAGGAGCTGGACGTGGCACTGCTCGGCGA
CGAGGTGGACATTTGCGTTCACTCCATGAAGGACGTTCCGACCTGGCTCC
CTGACGGCACGGTGCTGCCCTGCAATTTACCCAGAGAAGACTCGCGTGAT
GTTTTTATCTGCAACAAAGCCAAGTCGATCGCGGAGCTCCCGGCGGGGTC
GGTCATCGGGTCAGCCTCCTTGCGGCGTCAAGCGCAGATCCTTGCCCGCA
ATCCGAACGTCAAAGTCGTCAATTTTCGAGGCAATGTCCAGACCCGTCTA
CGCAAACTCAGTGAAGGAGTGGTGGATGCTACCATGTTGGCGGTCGCGGG
TTTGAATAGAATGAACATGCAGGATTGTGTCACGAGTATACTCGACTGGG
ACGAGATGCTGCCCGCGGTGGCCCAAGGCGCCATCGGCATTCAATGCCGC
TCTGATGACGCAACTTCCCTCAAATATCTCGCAGCATTGAATCATCCCGA
AACAAAAGTTTGCGTGGACTGCGAGCGGAGCTTCTTGGCCGAGTTGGACG
GGAACTGCAAGACCCCTATCGCGGGGCAGGCGCGGGTGATCGAGGACAAA
TTGCACTTCAAGGGCCTCGTGGCCATGCCTGATGGCACGCAAATGTTTGA
AACGGAGAAGGTTGGCGCATTGGCTGACGCGGTCAAGATTGGAAGGGAGG
CTGGAGAGGACTTGAAAGAGCAGGCAGGTCCTGAATTTTTCAAGGCGCTC
TACGCGGCGTTGCCGGCGCCAACACCAAAGCCTGCAGTCGCCTAGATGCC
CTGTATTAGAAAGATTGTAGGCATCTTCGCGTTGCTGCCCATCATGGCCG
GTGCATTTTTCCTACCAGGCGTATCACCACAACGAAACACTGCTCTGCGC
ATGGCTGCGGAAGCGGGAGGTGCGAAGCCAGTCCGAATTGGGACGCGGGG
CTCGCCCTTGGCTCTGGCGCAGGCATACGAGACAAAGCGGAGGCTCGGCG
AGGCCTTTCCAGAGCTGGCTCCTGAGGGGATGGTCGAGATAAAGATCATC
AAAACCACTGGAGACATGATTTTGGACAAGGCTTTGTCAGAGATCGGCGG
CAAGGGTCTCTTTACCAAGGAGCTGGACGTGGCACTGCTCGGCGACGAGG
TGGACATTTGCGTTCACTCCATGAAGGACGTTCCGACCTGGCTCCCTGAC
GGCACGGTGCTGCCCTGCAATTTACCCAGAGAAGACTCGCGTGATGTTTT
TATCTGCAACAAAGCCAAGTCGATCGCGGAGCTCCCGGCGGGGTCGGTCA
TCGGGTCAGCCTCCTTGCGGCGTCAAGCGCAGATCCTTGCCCGCAATCCG
AACGTCAAAGTCGTCAATTTTCGAGGCAATGTCCAGACCCGTCTACGCAA
ACTCAGTGAAGGAGTGGTGGATGCTACCATGTTGGCGGTCGCGGGTTTGA
ATAGAATGAACATGCAGGATTGTGTCACGAGTATACTCGACTGGGACGAG
ATGCTGCCCGCGGTGGCCCAAGGCGCCATCGGCATTCAATGCCGCTCTGA
TGACGCAACTTCCCTCAAATATCTCGCAGCATTGAATCATCCCGAAACAA
AAGTTTGCGTGGACTGCGAGCGGAGCTTCTTGGCCGAGTTGGACGGGAAC
TGCAAGACCCCTATCGCGGGGCAGGCGCGGGTGATCGAGGACAAATTGCA
CTTCAAGGGCCTCGTGGCCATGCCTGATGGCACGCAAATGTTTGAAACGG
AGAAGGTTGGCGCATTGGCTGACGCGGTCAAGATTGGAAGGGAGGCTGGA
GAGGACTTGAAAGAGCAGGCAGGTCCTGAATTTTTCAAGGCGCTCTACGC
GGCGTTGCCGGCGCCAACACCAAAGCCTGCAGTCGCCTAG back to top
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