EWM30321.1, cds403 (CDS) Nannochloropsis gaditana

Overview
NameEWM30321.1
Unique Namecds403
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:998321..998393 +
Alignment locationCM002455.1:998661..999682 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM30321.1
Productporphobilinogen deaminase
Orig transcript idgnl|cribi|Naga_100003g83.1838.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:998321..998393 +
CM002455.1supercontigCM002455.1:998661..999682 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0004418hydroxymethylbilane synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0018160peptidyl-pyrromethane cofactor linkage
GO:0033014tetrapyrrole biosynthetic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR022419Porphobilin_deaminase_cofac_BS
IPR022417Porphobilin_deaminase_N
IPR022418Porphobilinogen_deaminase_C
IPR000860HemC
Homology
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|585112980|gb|EWM30321.1| (porphobilinogen deaminase [Nannochloropsis gaditana])

HSP 1 Score: 740.339 bits (1910), Expect = 0.000e+0
Identity = 364/364 (100.00%), Postives = 364/364 (100.00%), Query Frame = 0
Query:    1 MPCIRKIVGIFALLPIMAGAFFLPGVSPQRNTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALPAPTPKPAVA 364
            MPCIRKIVGIFALLPIMAGAFFLPGVSPQRNTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALPAPTPKPAVA
Sbjct:    1 MPCIRKIVGIFALLPIMAGAFFLPGVSPQRNTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALPAPTPKPAVA 364          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|397566586|gb|EJK45103.1| (hypothetical protein THAOC_36301 [Thalassiosira oceanica])

HSP 1 Score: 491.115 bits (1263), Expect = 1.234e-171
Identity = 240/349 (68.77%), Postives = 286/349 (81.95%), Query Frame = 0
Query:   10 IFALLPIMAGAFFLPG-VSPQRNTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFIC--NKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALP 355
            I ALL + + + F P  VS  R+++    AE G  KP+RIGTRGSPLALAQAYET+RRL E FPEL  +G +EI ++KT GDMILDK+L E+GGKGLFTKELD ALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPRED+ D FI    + K+IA+LP  SVIG+ASLRRQAQ+LA+NP  K VNFRGNVQTRLRKL +GVVDAT+LA+AGL RM MQDC T++LDW+EMLPAVAQGAIGIQCRSDD  SLKY+ ALN  +T VCV+CER FL  LDGNCKTPIAGQAR+I+ K+ F+GL+AMPDG++ +ETE  GA+ DAV+IGR+AGE+LKE+AG +FF+ +    P
Sbjct:    4 ISALLFVGSASAFAPAQVSQGRSSSALFMAEDGEVKPLRIGTRGSPLALAQAYETRRRLIENFPELEEDGAIEICVMKTQGDMILDKSLMELGGKGLFTKELDTALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFITANGEIKTIADLPDNSVIGTASLRRQAQLLAQNPTFKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMEMQDCATAVLDWEEMLPAVAQGAIGIQCRSDDERSLKYIDALNCMDTHVCVNCERGFLEALDGNCKTPIAGQARIIDGKIVFRGLIAMPDGSEKYETEATGAIEDAVEIGRKAGEELKERAGDKFFQMMVEMSP 352          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|219117329|ref|XP_002179459.1| (hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217409350|gb|EEC49282.1| hydroxymethylbilane synthase [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 479.559 bits (1233), Expect = 1.562e-167
Identity = 227/312 (72.76%), Postives = 265/312 (84.94%), Query Frame = 0
Query:   41 GGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFIC--NKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKAL 350
            G  +P+RIGTRGSPLALAQAYET++RL E FP+L  EG +EI ++KT GDMILDK+L E+GGKGLFTKELD ALL DEVDICVHSMKDVPTWLPDGTVLPCNLPRED+ D FI   +  K I ++P GSVIG+ASLRRQAQ++A+NP +K VNFRGNVQTRLRKL +GVVDAT+LA+AGL RM+M  C TSIL+WDEMLPAVAQGAIGIQCR DD  SLKYLAALNHPETK CVDCER FL  LDGNCKTPIAGQAR+++ K+ F+GL+AMPDG++ FE E  GA+ +A KIGREAGE LK++AG EFF+ +
Sbjct:    4 GDIQPLRIGTRGSPLALAQAYETRKRLIENFPDLEAEGAIEICVLKTQGDMILDKSLMELGGKGLFTKELDTALLSDEVDICVHSMKDVPTWLPDGTVLPCNLPREDTNDAFIYKDDSVKRIEDIPDGSVIGTASLRRQAQLMAKNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMDMDGCATSILEWDEMLPAVAQGAIGIQCRDDDERSLKYLAALNHPETKACVDCERGFLEALDGNCKTPIAGQARIVDGKIMFRGLIAMPDGSKKFECESEGAIEEAAKIGREAGEGLKKEAGEEFFQRM 315          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|224008054|ref|XP_002292986.1| (porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335] >gi|220971112|gb|EED89447.1| porphobilinogen deaminase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 479.174 bits (1232), Expect = 2.298e-167
Identity = 231/320 (72.19%), Postives = 268/320 (83.75%), Query Frame = 0
Query:   38 AEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKA--KSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALP 355
            AE G   P+RIGTRGSPLALAQAYET+RRL E FPEL  EG +EI ++KT GDMILDK+L E+GGKGLFTKELD ALLGDEVDICVHSMKDVPTWLP+GTVLPCNLPRED+ D FI      K IA+LP  SVIG+ASLRRQAQILA+NP +K VNFRGNVQTRLRKL +GVVDAT+LA+AGL RM+M DC T+IL+WDEMLPAVAQGAIGIQCRSDD  SLKY+ ALN  +T VCV+CER+FL  LDGNCKTPIAGQAR+++ K+ FKGL+AMPDG+  +ETE  G +ADAV+IGR+AGE+LK QAG +FF+ +    P
Sbjct:    2 AEEGAVTPLRIGTRGSPLALAQAYETRRRLIENFPELEAEGAIEICVMKTQGDMILDKSLMELGGKGLFTKELDTALLGDEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITANGDIKRIADLPDNSVIGTASLRRQAQILAQNPTLKCVNFRGNVQTRLRKLDDGVVDATLLAIAGLKRMDMDDCATAILEWDEMLPAVAQGAIGIQCRSDDTRSLKYIDALNCMDTHVCVNCERAFLEALDGNCKTPIAGQARIVDGKIVFKGLIAMPDGSLKYETEATGEIADAVEIGRKAGEELKAQAGEKFFEMMVEMSP 321          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|1210523376|dbj|GAX18013.1| (hydroxymethylbilane synthase [Fistulifera solaris])

HSP 1 Score: 476.478 bits (1225), Expect = 6.310e-166
Identity = 232/345 (67.25%), Postives = 276/345 (80.00%), Query Frame = 0
Query:   13 LLPIMAGAFFLPGVSPQRNTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICN--KAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALP 355
            LL     AF     S + ++AL MA      +P+RIGTRGSPLALAQAYET++RL E FPEL  EG +EI ++KT GDMILDK+L E+GGKGLFTKELD ALLG+EVDICVHSMKDVPTWLP+GTVLPCNLPRED+ D FI      K I +LP  SVIG+ASLRRQAQI+A+NP +K VNFRGNVQTRLRKL +G+VDAT+LA+AGL RMNM  C TS+LDWDEMLPAVAQGAIGIQCR DD  SLKY+AALNH ETK CVDCER+FL  LDGNCKTPIAGQA++I+ K+HF+GL+AMPDG+  +ET   G +ADA +IG +AG++LKE+AG +FF+ +    P
Sbjct:    8 LLASSVAAFAPSTPSARTDSALFMA------EPLRIGTRGSPLALAQAYETRKRLQEHFPELREEGAIEICVLKTQGDMILDKSLMELGGKGLFTKELDTALLGNEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFIHKDGSVKRIEDLPDHSVIGTASLRRQAQIMAKNPTLKCVNFRGNVQTRLRKLDDGIVDATLLAIAGLKRMNMDGCATSVLDWDEMLPAVAQGAIGIQCRDDDERSLKYIAALNHAETKACVDCERAFLEALDGNCKTPIAGQAKIIDGKIHFRGLIAMPDGSLKYETSAEGEVADAKQIGLKAGQELKERAGAKFFEMMVEMSP 346          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|1210523614|dbj|GAX17574.1| (hydroxymethylbilane synthase [Fistulifera solaris])

HSP 1 Score: 471.47 bits (1212), Expect = 6.175e-164
Identity = 230/345 (66.67%), Postives = 275/345 (79.71%), Query Frame = 0
Query:   13 LLPIMAGAFFLPGVSPQRNTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICN--KAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALP 355
            LL     AF     S + ++AL MA      +P+RIGTRGSPLALAQAYET++RL E FPEL  EG +EI ++KT GDMILDK+L E+GGKGLFTKELD ALLG+EVDICVHSMKDVPTWLP+GTVLPCNLPRED+ D FI      K I +LP  SVIG+ASLRRQAQI+A+NP +K VNFRGNVQTRLRKL +G+VDAT+LA+AGL RMNM  C TS+LDWDEMLPAVAQGAIGIQCR +D  SLKY+AALNH ETK CVDCER+FL  LDGNCKTPIAGQA++I+ K+ F+GL+AMPDG+  +ET   G +ADA +IG +AG++LKE+AG +FF+ +    P
Sbjct:    8 LLASSVAAFAPSTPSARTDSALFMA------EPLRIGTRGSPLALAQAYETRKRLQEHFPELREEGAIEICVLKTQGDMILDKSLMELGGKGLFTKELDTALLGNEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFIHKDGSVKRIEDLPDHSVIGTASLRRQAQIMAKNPTLKCVNFRGNVQTRLRKLDDGIVDATLLAIAGLKRMNMDGCATSVLDWDEMLPAVAQGAIGIQCRDNDERSLKYIAALNHAETKACVDCERAFLEALDGNCKTPIAGQAKIIDGKIQFRGLIAMPDGSLKYETSAEGEVADAKQIGLKAGQELKERAGAKFFEMMVEMSP 346          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|1072239007|gb|OEU23734.1| (porphobilinogen deaminase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 471.855 bits (1213), Expect = 6.885e-164
Identity = 223/327 (68.20%), Postives = 272/327 (83.18%), Query Frame = 0
Query:   31 NTALRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPELAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFIC--NKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALP 355
            +TAL MA E+G   P+RIGTRGSPLA+AQA+ET+RRL E F E+  EG +EI ++KT GDMILDK+L E+GGKGLFTKELDVALL +EVDICVHSMKDVPTWLP+GTVLPCNLPRED+ D FI   N  K+IA+LP GSVIG+ASLRRQ+Q++A+NP +K VNFRGNVQTRLRKL++GVVDAT+LA+AGL RM+M    T++L+WDEMLPAVAQGAIGIQCR+DD  +LKY+ ALNH +T VCV+CER+FL  LDGNCKTPIAGQA++I+ K+ F+GL+AMPDG++ F  E  G +ADAVKIG EAGE LK +AG +FF  +    P
Sbjct:   32 STALFMAEESGEVVPLRIGTRGSPLAMAQAFETRRRLQETFEEMNEEGAIEICVMKTQGDMILDKSLMELGGKGLFTKELDVALLANEVDICVHSMKDVPTWLPEGTVLPCNLPREDTNDAFITKDNLIKTIADLPDGSVIGTASLRRQSQLMAQNPTLKCVNFRGNVQTRLRKLNDGVVDATLLAIAGLKRMDMDKHATAVLEWDEMLPAVAQGAIGIQCRTDDERALKYINALNHMDTHVCVNCERAFLEALDGNCKTPIAGQAKIIDGKIKFRGLIAMPDGSEKFTCESEGEIADAVKIGHEAGEKLKAEAGDKFFAMMVEMSP 358          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|88770654|gb|ABD51930.1| (chloroplast hydroxymethylbilane synthase, partial [Guillardia theta])

HSP 1 Score: 455.677 bits (1171), Expect = 6.790e-158
Identity = 219/318 (68.87%), Postives = 262/318 (82.39%), Query Frame = 0
Query:   35 RMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPE-LAPEG-MVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKAL 350
            R++    G   +++GTRGSPLALAQAYET+RRL E FPE L  +G  V I II T+GDM L KALSEIGGKGLFTKELDVALL  EVD CVHSMKDVPT+LPDGT L   LPRED+RD FI  K +S  E+P G+VIGSASLRRQAQI A+NP +K VNFRGNVQTRLRKL + VVDAT+LA+AGL RMNM DCVT +LDWDEMLPAVAQGAIGIQ RSDD  +LKY++ALNH +TK CVDCERSFLA LDG+CKTPIAGQAR+I+ K+HF+GLVA PDG+++F  E+VG ++D +KIG++AGE+++++AG +FF  L
Sbjct:    8 RISTIMSGEPVIKLGTRGSPLALAQAYETRRRLAELFPEELGEKGEKVSINIINTSGDMELSKALSEIGGKGLFTKELDVALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISPKYQSFEEMPEGTVIGSASLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLALAGLKRMNMADCVTKVLDWDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCERSFLATLDGSCKTPIAGQARIIDGKIHFRGLVASPDGSKIFRAERVGDVSDYMKIGKDAGEEIRKEAGEQFFADL 325          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|551663427|ref|XP_005834478.1| (hypothetical protein GUITHDRAFT_162740 [Guillardia theta CCMP2712] >gi|428178623|gb|EKX47498.1| hypothetical protein GUITHDRAFT_162740 [Guillardia theta CCMP2712])

HSP 1 Score: 456.833 bits (1174), Expect = 8.638e-158
Identity = 225/337 (66.77%), Postives = 269/337 (79.82%), Query Frame = 0
Query:   22 FLPGVSPQRNTA------LRMAAEAGGAKPVRIGTRGSPLALAQAYETKRRLGEAFPE-LAPEG-MVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKAL 350
            FLP  +P  N A       R++    G   +++GTRGSPLALAQAYET+RRL E FPE L  +G  V I II T+GDM L KALSEIGGKGLFTKELDVALL  EVD CVHSMKDVPT+LPDGT L   LPRED+RD FI  K +S  E+P G+VIGSASLRRQAQI A+NP +K VNFRGNVQTRLRKL + VVDAT+LA+AGL RMNM DCVT +LDWDEMLPAVAQGAIGIQ RSDD  +LKY++ALNH +TK CVDCERSFLA LDG+CKTPIAGQAR+I+ K+HF+GLVA PDG+++F  E+VG ++D +KIG++AGE+++++AG +FF  L
Sbjct:   21 FLPS-TPLSNAAKIRPATSRISTIMSGEPVIKLGTRGSPLALAQAYETRRRLAELFPEELGEKGEKVSINIINTSGDMELSKALSEIGGKGLFTKELDVALLKKEVDFCVHSMKDVPTYLPDGTHLEAMLPREDTRDAFISPKYQSFEEMPEGTVIGSASLRRQAQIFAKNPKIKCVNFRGNVQTRLRKLDDEVVDATLLALAGLKRMNMADCVTKVLDWDEMLPAVAQGAIGIQVRSDDDKTLKYISALNHKDTKTCVDCERSFLATLDGSCKTPIAGQARIIDGKIHFRGLVASPDGSKIFRAERVGDVSDYMKIGKDAGEEIRKEAGEQFFADL 356          
BLAST of EWM30321.1 vs. NCBI_GenBank
Match: gi|676388505|ref|XP_009037531.1| (hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens] >gi|323451650|gb|EGB07526.1| hypothetical protein AURANDRAFT_27306 [Aureococcus anophagefferens])

HSP 1 Score: 453.751 bits (1166), Expect = 2.998e-157
Identity = 228/314 (72.61%), Postives = 257/314 (81.85%), Query Frame = 0
Query:   43 AKPVRIGTRGSPLALAQAYETKRRLGEAFPE-LAPEGMVEIKIIKTTGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPDGTVLPCNLPREDSRDVFICNKAKSIAELPAGSVIGSASLRRQAQILARNPNVKVVNFRGNVQTRLRKLSEGVVDATMLAVAGLNRMNMQDCVTSILDWDEMLPAVAQGAIGIQCRSDDATSLKYLAALNHPETKVCVDCERSFLAELDGNCKTPIAGQARVIEDKLHFKGLVAMPDGTQMFETEKVGALADAVKIGREAGEDLKEQAGPEFFKALYAALP 355
            A P+RIGTRGSPLALAQAY T+  L + FPE L  EG +++ I+KT GDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLP  TVLPC L RED+RDVFI   AKS+ +L  GSVIGSASLRRQ+QILA NP +K VNFRGNVQTRLRKL EGVVDAT+LA AGL RM+M D VT++L+WDEMLPAVAQGAIGIQCR DDA +LKY+AALNH ET  CV CER+FLA LDGNCKTPIAGQAR+++ +L F GLV+  DG QM+   K GA ADA KIGREAGE +K +AG EFF+ L    P
Sbjct:   17 ATPLRIGTRGSPLALAQAYMTRELLMKNFPEELGGEGAIQLCIMKTQGDMILDKALSEIGGKGLFTKELDVALLGDEVDICVHSMKDVPTWLPAKTVLPCMLEREDTRDVFISPTAKSLKDLKDGSVIGSASLRRQSQILAINPTLKCVNFRGNVQTRLRKLDEGVVDATLLAYAGLKRMDMADEVTAVLEWDEMLPAVAQGAIGIQCRDDDARALKYIAALNHEETFTCVSCERAFLAALDGNCKTPIAGQARIVDGELLFDGLVSSLDGQQMYRATKTGAPADAEKIGREAGEGIKAEAGIEFFEWLNQEEP 330          
The following BLAST results are available for this feature:
BLAST of EWM30321.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112980|gb|EWM30321.1|0.000e+0100.00porphobilinogen deaminase [Nannochloropsis gaditan... [more]
gi|397566586|gb|EJK45103.1|1.234e-17168.77hypothetical protein THAOC_36301 [Thalassiosira oc... [more]
gi|219117329|ref|XP_002179459.1|1.562e-16772.76hydroxymethylbilane synthase [Phaeodactylum tricor... [more]
gi|224008054|ref|XP_002292986.1|2.298e-16772.19porphobilinogen deaminase [Thalassiosira pseudonan... [more]
gi|1210523376|dbj|GAX18013.1|6.310e-16667.25hydroxymethylbilane synthase [Fistulifera solaris][more]
gi|1210523614|dbj|GAX17574.1|6.175e-16466.67hydroxymethylbilane synthase [Fistulifera solaris][more]
gi|1072239007|gb|OEU23734.1|6.885e-16468.20porphobilinogen deaminase [Fragilariopsis cylindru... [more]
gi|88770654|gb|ABD51930.1|6.790e-15868.87chloroplast hydroxymethylbilane synthase, partial ... [more]
gi|551663427|ref|XP_005834478.1|8.638e-15866.77hypothetical protein GUITHDRAFT_162740 [Guillardia... [more]
gi|676388505|ref|XP_009037531.1|2.998e-15772.61hypothetical protein AURANDRAFT_27306 [Aureococcus... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna403rna403Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications