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Properties
| Property Name | Value |
|---|
| Product | ribosomal protein l22 |
| Orig transcript id | gnl|cribi|Naga_100001g101.8232.mrna |
| Orig protein id | gnl|cribi|Naga_100001g101.8232 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:632229..633675 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna4015 ID=rna4015|Name=rna4015|organism=Nannochloropsis gaditana|type=mRNA|length=2066bp
GCTTACTTTCCGCCAACTCACACCATACCTGAACCGAGAAACCCAGTGAT
TATGGTCACAGGGACAATCTTGTCAATTGGGATTGGATTGGAACTGCCGC
TTTTGGTTTCAGAGAGATCCGCATCGCCTTCCCCCGGCCGGGAAGAAGGC
TGCGAGACGACTTGAGAGGACAAAAGAACCAGCTTAGGAGGTTCCTCATC
ATCCTCGCCTTGCTCGGTCAGGAGATCATCTTGCGAGCTTGTCATCTGTG
AAATTTTGCGATCGAATATAGCCTAAGTAAAATGTAGGAATGCGAGTCTT
GCAAATTGATCGATTCTAGTACGTACGACCCCTCATTTCAGTGCTTCGGA
GTCGGCGAGGGCTGCGGCTGGCACACTAGTTTTTATGCATTTATGGTATC
GCTGTAGTACCTTCGCATAAGATTGAACATACAATTGTCCAATCAAACAC
ATGAATATAGACTGGTTTATAGAGTCGTATGTCAGGTCTTGCGAGTAGCT
GAGAGGAAGGCAACGCGGAACGATGCTGCAGGCGTCTCCCCTCAAGGCCC
CCCCCCCCGCTCCTCCATGGGCTCTGCAAGCCGCCTTTACGGCCTTGGGA
TTGTCTTCATTCATGCTTTCCAATGCGTTATGGGCGGAGATGCCGGCCCT
TGTCTCTGCTCTCCCGGAGGGCAACAAGCTCGGGAGCTATCTGCTTCTAT
CCTTGCAGGCCGCGAATGTGGTGCCTGTGATCGCCATGCTTCGGGGTCCG
GAAGTCGTGCATCTGGAATCCATCATTTGGGCGCTTCTCTTAGGAGGAGT
GGTGGCCAGCCAGCTCATGAGCTTTTGCTGGGCCGCTACCACCCCCATCC
CCGGGGCGGGTGGCAAGTCCCATGCGCTCTCCCTCATTCTCCTGACATTC
CTCGCTGGTTGCATCAATAACTCCTCCAGCCTCTTCCTCTACCCATTTGT
GGCTCGTTGGGAACGGCGGTACGTGTCGGCGCTGGCCACGGGGGAGGGGC
TGTCGGGCATCCTGGTCTCCCTCATCGGGCTGACTCAGAACGTAGGCGGG
GCCCGGCCCCGCTTCTCCGTCCGGGCCTACTTCCAAGGGGTCAGCGCCTT
ATACGTCTTCTCCCTTCTGGGTTTCCTCTTCCTCCTGCAAGAAGAGAGGC
ACAAGAAAGCGCGCGTGGCCCTCAGCATGGATCGAGTTGTAGCAGAAGAG
AGGGAGACTGCCTGGCAGGGGGGGGCCAAGAAGCGAGTGCTCCTGAGCGT
CAAGGACGAAGACAGCGATGCCCTAGTTGTGCCGCTGTCCGCCCCGACAT
TGGCACCCGCCCCCGTCCTTGCCCTCATTTGGCCCTTTCTCTTGGCCCAG
TTCGGGATCAGCCTCTGGGCCTATGGCGTCATTCCCGCCCTCACCCCCAT
ATCCACCAGCGGCTACCAGCACGCCGCCCACGTCCTGCAGTACTCCTCCA
TCGTCTCTATGGCGCTCGATCCTCTTAGCCGCGCCCTCACCCATCGCCTG
CGCTGCTACCGGCTGCCGCTCCTCGTCGTCTTGGTCAACGTCCTTGCCAC
TGTCCTCTGCGTGGCGGCCGCCATCTCCCCCCGCCCGCCCTTCGTGGACC
AGCCGCTTGGAGGGCTCTTTGTCGTGTTTTTCAACGGAGCCTTTACCGCC
GCCTTCGCCTTCACCTCCACCATGGTCTTCTTCTGCATCCACCGGGCCCT
CGGGCCGCGGCACGGGCTGCCTCTGCCCGTCCACGCGAGAAGGGCTGGAG
GGGCGGACGAGGCGCCAGGCCTACAGGAAGATGCCTGCGCCCTGATGGTC
GGTCAGAGGCGGGGGGGGGGGCGTCCGGTGTCTATTGGGAGAGGAGAGGG
CGAGGGCGAGCACGCGGGCGAGGTCGGGCCGGGGGGGGAGGAGGAGTTCG
TGCAGGTCTTACGGCGGCAGGACGGCTTTCGGTGGTCAGGCTTTATTGTC
CAGGTTGGAGCCTTTGTGGGCGCACTGGCCACCTTTCTTCTGGTCGCCTG
ACCCGGAACAAGCCGCCATGTAATATACATAAAGCAAAAGCAATGATCAA
ATGTGGCGCCCCCTCC back to topprotein sequence of rna4015 >rna4015-protein ID=rna4015-protein|Name=rna4015|organism=Nannochloropsis gaditana|type=polypeptide|length=156bp
MREVVSRKNRIRMSPWKINLLTRQVRGLPVVEALMQLKFSRKQKGPPLVA
KVIQNAANLANIRHNLHPEDLMVAEAFVNRANIQKGIMFMGKGRFGLKLR
RYSHVVVRLKEIDFEGSLAACKNRFQRARWETRRALADKVREAREGDGAR
AGSGLA back to topmRNA from alignment at CM002462.1:632229..633675- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna4015 ID=rna4015|Name=rna4015|organism=Nannochloropsis gaditana|type=mRNA|length=1447bp|location=Sequence derived from alignment at CM002462.1:632229..633675- (Nannochloropsis gaditana)
GTCTGTCATCACGGGCCGCACCCTACCCAGCTTGGGCAGATGCCGCCAAG
CTGACCCTGTAAAGCGCTCGAGCTGAAGCAGAAGGAGGGGGAGGAGGTGA
GGGCGGACACTGCATTTGACGGCCTGCGTCTCCCTACATTCATGCGCGCC
ACTGAGCGAGAGCACACGTGAACGCATGAGAGAGGCAAGTTAATTCTCAT
TTTACGGATTTTTGTGGTTACAGAACCTATCGATTCGTTCACATGAAGGA
CGAAGGACGAAGGCAACGTCCAGGAAGGGGAGAGGGGGACAGGGAGGCCC
AACCACCCCTCACCGCCGCCCCGGCTTTCAGGGGAATTTCCCGGTTCGAT
TTGACACCTCAAACGGCCAAAAACGACTGGATAGGACAATCTTATACATC
AACTCTCACAGGTCATCAATGGCATCGACGATGCTGCGACGCCTTTTTAG
CCGGTATTCCTCTCCACCACTTGCTCGCAGTCCACCGAGTATGTTGCAGC
GGCCCCTCGAATGCGAGTCGCGAGTCTCGCTGTCATCCGCGCCGTGTGTT
GCCGTGAATAAGCGGGCCATGTCTTCCACTGCAGTTGAAGGAGTTGCGCC
ATCTGGGGCTCTTGATGAGCCTATTGTGTCGCGGTACGTTCTAGGGAGCG
ATTTGCTATTGTGAATCGAGGAATCCGAGGGGGCCCTGGGTCAAGACCCT
TCCTGTGCTTATATACCGAGTGCCGAGACGGGGCCGCTTTGGACACATTA
ACACGCGCTGTGCTGCCGAGTCACGGGTTGAAGCGTGACCACACGGGACG
GCCCCCCTCCCTTGTCCCCTCGGTGCCGCGGGCGTGCGAAGAAGGCATCC
CTGCACGCATAGTCTCACTCGTCTTTTTCACCTATCGTTGAGCGTCTCAT
CTTTCTTATCGTGATTCCCGCGTCACGTGCACCCACAGCGAGATGCGGGA
GGTAGTGTCCCGCAAGAACAGGATCCGCATGTCCCCATGGAAGATCAACC
TCCTTACCCGGCAAGTGCGCGGACTGCCCGTCGTGGAGGCCCTCATGCAG
CTCAAGTTTTCCCGGAAGCAGAAAGGGCCTCCTTTGGTGGCGAAGGTCAT
CCAGAACGCGGCCAATCTGGCCAATATCCGGCACAACCTGCACCCCGAGG
ACCTGATGGTGGCCGAGGCCTTCGTGAACCGCGCCAACATCCAGAAGGGG
ATCATGTTCATGGGGAAGGGCAGATTCGGTCTCAAGCTCCGGAGGTACAG
CCACGTGGTGGTCCGCCTGAAGGAGATAGATTTCGAGGGCTCCCTGGCTG
CGTGCAAGAACCGATTCCAGAGGGCCCGGTGGGAGACCAGGAGGGCGCTG
GCGGACAAAGTGAGGGAGGCGCGGGAGGGGGACGGGGCGAGGGCTGGGTC
GGGGCTGGCATAGAACACGTTAAAAGAAAAGATGGAAGGCTGTGAGA back to topCoding sequence (CDS) from alignment at CM002462.1:632229..633675- >rna4015 ID=rna4015|Name=rna4015|organism=Nannochloropsis gaditana|type=CDS|length=471bp|location=Sequence derived from alignment at CM002462.1:632229..633675- (Nannochloropsis gaditana)
ATGCGGGAGGTAGTGTCCCGCAAGAACAGGATCCGCATGTCCCCATGGAA
GATCAACCTCCTTACCCGGCAAGTGCGCGGACTGCCCGTCGTGGAGGCCC
TCATGCAGCTCAAGTTTTCCCGGAAGCAGAAAGGGCCTCCTTTGGTGGCG
AAGGTCATCCAGAACGCGGCCAATCTGGCCAATATCCGGCACAACCTGCA
CCCCGAGGACCTGATGGTGGCCGAGGCCTTCGTGAACCGCGCCAACATCC
AGAAGGGGATCATGTTCATGGGGAAGGGCAGATTCGGTCTCAAGCTCCGG
AGGTACAGCCACGTGGTGGTCCGCCTGAAGGAGATAGATTTCGAGGGCTC
CCTGGCTGCGTGCAAGAACCGATTCCAGAGGGCCCGGTGGGAGACCAGGA
GGGCGCTGGCGGACAAAGTGAGGGAGGCGCGGGAGGGGGACGGGGCGAGG
GCTGGGTCGGGGCTGGCATAG back to top
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