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Properties
| Property Name | Value |
|---|
| Product | arginine-trna-protein transferase 1 |
| Orig transcript id | gnl|cribi|Naga_100001g122.8239.mrna |
| Orig protein id | gnl|cribi|Naga_100001g122.8239 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:590766..592981 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3997 ID=rna3997|Name=rna3997|organism=Nannochloropsis gaditana|type=mRNA|length=1944bp
GAGAAATCATTCGAACTTATCTTGTCGCTGTGAGCAGTCTGCAAAGTCCC
TGTCCTTTCCTTGCTCTGTGGAAATCAAGAGTCGGAGAAATAATAATTAC
CGTGCTTTCATCTGCCTGGTGGTGGACGACCAGGTCCCAAGTGTTGCTGA
CGGGGTCTGACGCTCGCTACGTCGACGCTTCGCTTATCGTGCGAAAGCCT
TCAACCGCAGGGCACGAAATCAGCAGGCGAAAATATTGGTGGCTCGCCCT
TGTCGCGAGCATGCTACATCCTGGGAGGGCCTAGGGCCGTGCGGTCGCAC
TGGCATTCCGTTTGTTGAGGGTCAGGCGTACGCGTATCTCTTAATACAAG
TCGCCTCTCCGACTGAGCTCGCATTTTCGTTATCTCGTCATCATGACCCG
CCCTCCTCGATATCGGCAGCGACAGTCAGAAAAGTGCCCCTATAATGATA
GGTATGCTCGCCCTTTGACGAAACCTGGGACGTTTTGCAGGCCATACCAG
TCATGAATCACATATCAGAGAAGGATGAGAGACGGGCATTAATCTATAGT
GGGAATGCTGACACGGCAAGCGGAAGGGGGCGATACGGAGGAGTGTCCAC
AGAGGACAACGGCAATCCACCAGATTTGGCGTCCACTTTCTACCACCAAA
GCTCAATTTTTCATACCATGCGCAAGGGGTCAATTGTGGGGCATCATAGA
AACCTTACTGAAATTATGCGAGGAACGCGTCGCCACCGATTGTACTTGGC
CTTCTTCCTGTTTGCGACCTCGGCGTTTGTCTTGGTTGCGATGCTGTCAA
GAGGCGGCTGGACCTTAGGGCGCATTATCACAACTTCCGTGATGATGCCG
CGTGTGGTAACGTGTCCGCCGGCTCTGGCGGAATGGGAGCCGAACGCCGA
GTGCAAGGCTTCAAAGATCGTCATTTTCAGCACCCGCATCAATTACGGTC
TCTTTGGCGACCTGAAGTACCTGACAAGCTCTGAAACCTCGGTGCACACC
CAGGCGGAAGCCGCGGGCGGGGAATCTCGGGGCTTAAAGACGAGAGAGAA
GGCTATTGTCTCTAGCAATATCCAAAGCTCTTACGACACATGGGCAGCCA
ACTTCCCCGAGTATATGGATTACATCCACACGACAGAAAGCTGCTTGGTC
GTGAGTTTTCTCTCCACCGCACTATGCCTCATTTTGCTGGGGGTCATCAG
CTTGGGCCTACCAGCCTCAGGACAGGCCAAATTGGACACACTGTCGGCTG
GGTTCTACGCGCTTGCCCTTTCGGCTCTTTGCCTTTTTGTAGGCATGCTC
GCATGGATGGGAGTGCCGCTTTCTGCCTTCACGACAGAATGCCACCCTTC
TGCTTTGCCTGGTGTCAATGGCACCGGCTTAAATTGGGCAGACACTAGCT
CTGATTTCTACGGTGGGGCAATGTGTGTGCAGCTCGATGGCGGGCTCTGT
TCAGAAAACTGCTCCACCACAAGCTCCGTTAATCGGGGGGGTGGCATGTA
TGGCATCGCGGTGTTTTCCTGCTTGTTGCAGTGCGTCTGTCTCGTCTTCT
GGGCGAAACTGCAGGAGGAACTTTCGAGTGCGGATGATCAATCTCGCGGA
GGACGTACGAGTTTTGGGACGATCACCAGCGAGGTGACACCTGTACTGTC
GTGAAGTCGTGACCATCTCCCAGGAAGGGCCTTGGAACTGGGATGTTCCC
ATCGTTGGGAAACTGACGCATATGCTCGCGCTATTGCACCTTGACAACTG
TTGGATAACTTAAAAATATTGAACAGCGGCATAACATGTGTATCCTACCT
GCTGCTTAAGAAAGGCAGAAAGAAAGGATAATTAGTGTGCATCATAGTCT
CCATCCGCGCCAAAACATTCAACTACAACACATCCTCACTTTGTGTTTCG
GGAGAAAATGGTATAAATAAATAAAAGCGCACAGGTCCTACTGT back to topprotein sequence of rna3997 >rna3997-protein ID=rna3997-protein|Name=rna3997|organism=Nannochloropsis gaditana|type=polypeptide|length=393bp
MAVLVRSNSKIMLSFGMVFLHVIMTLCCLVQVHGLHRLGCFVTSGKTGAP
SASTWLASMSGDRLRMRFYRRGQMRCFLGTEESQNNDGRAQPLARPDVDD
NAGGLRQDAGGPSSLATMGQRAFVITPHQHGNRHLESLLHLAGREKHKFS
SALKELEHHVQLEVAEALIFNIRKHTNGGMLPSADGSSPKLSAEQRDVVI
EYIPEVLQIMDRLEEHGHHHRDARVSLYATEALSYEVSTTSLVKAAPLLA
RIFKNIDLMLAKSPELKGGAPFIIKGMMFLNAPMPVRSVRKAKECFQTAH
QIDASSPRNNYFCGVAAYLEKDYARAHKYFAEALSLAQTAALVSNARMTQ
GKYDAGSVCLANKEMPMDEYLHVQCRLGMDLASTQITQTSAHP back to topmRNA from alignment at CM002462.1:590766..592981- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3997 ID=rna3997|Name=rna3997|organism=Nannochloropsis gaditana|type=mRNA|length=2216bp|location=Sequence derived from alignment at CM002462.1:590766..592981- (Nannochloropsis gaditana)
CGACGCAGTTCAAACTCCCGGGCCCTGGCCCCTGATAAACCCCATCTCTC
TTGGTCGTGGAGGACATTACCTCTCATTCTGCGCCCTACCCCACACCATC
AGGGATACACGTTCTCTTAACTGTGAGGTGAGGACGTTCGCAGGTCCTGA
ATTCGCGACGTGACAGGAAGGCACGTACCCAAGCATTGGCAAGGGGCTGT
CAAGTTGTCCCTATGGCCGTTTTGGTCAGGTCAAACTCGAAAATAATGCT
GTCATTTGGGATGGTATTCCTGCATGTAATAATGACACTCTGCTGCCTCG
TCCAGGTCCATGGCCTGCATCGCCTGGGCTGTTTTGTAACCAGCGGGAAA
ACAGGAGCGCCGTCTGCCTCAACCTGGTTGGCCTCCATGTCAGGCGACCG
TTTGCGAATGAGGTTTTACAGGCGGGGACAGATGCGGTGTTTTTTAGGAA
CGGAGGAATCTCAAAACAATGACGGTCGAGCTCAGCCGCTAGCCCGGCCA
GACGTGGATGATAATGCAGGAGGTCTGCGTCAAGACGCCGGAGGGCCCTC
ATCCCTCGCCACGATGGGTCAACGTGCGTTCGTCATCACCCCGCACCAGC
ATGGAAACCGCCATCTTGAAAGCCTGCTACATTTGGCAGGACGGGAGAAG
CATAAGTTTTCCAGCGCCTTGAAGGAGCTGGAACACCACGTCCAACTTGA
GGTAGCTGAGGCGCTAATCTTCAACATACGGTACGGACTGAGACACACGG
AGGACAGGGGTATTGTTAAGGTCGGCTTTGATAACAGAGAGGGTCAGGAT
GGTCTCGATTTTGTGATTCGCGGAGTGGGGAGGACGAGAACTTCGGGCCA
TGGCCTGACCCTAATTCTAATATTGGAAGTGTCCCGGCCCCTCGCATCAT
CCTCATCGAAGGAAACACACGAACGGGGGAATGCTTCCGTCTGCCGATGG
ATCCTCGCCCAAGCTGAGTGCTGAGCAGCGCGACGTGGTCATCGAATATA
TCCCCGAGGTGTTGCAAATCATGGACCGCCTGGAGGAACACGGGCATCAC
CATCGCGACGCCCGTGTCTCCCTCTACGCGACAGAGGCCCTCAGCTACGA
GGTCTCCACCACCTCTCTCGTCAAGGCCGCACGTGAGTACGGGTTGTGAG
CCGGGTGGTAAATGTTTTATGAGGGAAGTGCATGCTTTGGGGCCCTAGTC
GTGCCACACACACACTTCTCATTCGGGGTAGCTTAATCTCTCCTCCTCTT
CAATCGTTGGACTTTTGTCCTTGGCGCAAAGCGCTGCTGGCACGCATCTT
CAAAAACATTGACTTAATGCTAGCCAAGAGCCCGGAGCTGAAAGGCGGCG
CGCCTTTCATCATAAAAGGCATGATGTTCCTGAATGCCCCCATGCCCGTG
CGCAGCGTGAGAAAGGCAAAGGAGTGCTTCCAGACGGCACATCAGGTGAC
TCAGACTCACCTGTGACATTTAATTCAAAGCAGCTTCTGATTGCACCCAT
AATGCATTTGACAGATTGACGCTAGCAGCCCCCGTAACAATTATTTTTGT
GGGGTGGCGGCTTATTTGGAGAAGGACTACGCACGAGCTCACAAATACTT
CGCGGAAGCCCTCTCTCTCGCGCAGACCGCTGCTCTGGTGTCGAATGCAC
GCATGACACAGGGCAAGTATGACGCAGGTAGCGTCTGTCTTGCGAACAAA
GAGATGCCTATGGATGAGTATTTGCATGTACAGTGTCGGCTAGGTATGGA
CTTGGCAAGCACGCAGATAACTCAGACAAGTGCTCATCCATAAATTATGT
GAATATCTTGGACCGATACAAAGCAGTGGTGTGAAGTAGTGTGTGACCTT
TTCATGCTGCAGATCTCGGTGGATGCATGCAGTTGTGCTTGATACAAAAG
TCGTTTAGAATAGGCTGTGGTGCGGTCAAAAAGGATGTCTGGAAATCTAC
AACCAGAGACGGTCCGTTTGTGTAGTTACATACAGAGTGAAGCCCTGTAA
TAAACATGACAAATTTGTTAAGCCATGTCCAAAAGAAAATCCATAATACA
GTAGGACCTGTGCGCTTTTATTTATTTATACCATTTTCTCCCGAAACACA
AAGTGAGGATGTGTTGTAGTTGAATGTTTTGGCGCGGATGGAGACTATGA
TGCACACTAATTATCCTTTCTTTCTGCCTTTCTTAAGCAGCAGGTAGGAT
ACACATGTTATGCCGC back to topCoding sequence (CDS) from alignment at CM002462.1:590766..592981- >rna3997 ID=rna3997|Name=rna3997|organism=Nannochloropsis gaditana|type=CDS|length=4728bp|location=Sequence derived from alignment at CM002462.1:590766..592981- (Nannochloropsis gaditana)
ATTGACGCTAGCAGCCCCCGTAACAATTATTTTTGTGGGGTGGCGGCTTA
TTTGGAGAAGGACTACGCACGAGCTCACAAATACTTCGCGGAAGCCCTCT
CTCTCGCGCAGACCGCTGCTCTGGTGTCGAATGCACGCATGACACAGGGC
AAGTATGACGCAGGTAGCGTCTGTCTTGCGAACAAAGAGATGCCTATGGA
TGAGTATTTGCATGTACAGTGTCGGCTAGGTATGGACTTGGCAAGCACGC
AGATAACTCAGACAAGTGCTCATCCATAACGCTGCTGGCACGCATCTTCA
AAAACATTGACTTAATGCTAGCCAAGAGCCCGGAGCTGAAAGGCGGCGCG
CCTTTCATCATAAAAGGCATGATGTTCCTGAATGCCCCCATGCCCGTGCG
CAGCGTGAGAAAGGCAAAGGAGTGCTTCCAGACGGCACATCAGGAAACAC
ACGAACGGGGGAATGCTTCCGTCTGCCGATGGATCCTCGCCCAAGCTGAG
TGCTGAGCAGCGCGACGTGGTCATCGAATATATCCCCGAGGTGTTGCAAA
TCATGGACCGCCTGGAGGAACACGGGCATCACCATCGCGACGCCCGTGTC
TCCCTCTACGCGACAGAGGCCCTCAGCTACGAGGTCTCCACCACCTCTCT
CGTCAAGGCCGCACATGGCCGTTTTGGTCAGGTCAAACTCGAAAATAATG
CTGTCATTTGGGATGGTATTCCTGCATGTAATAATGACACTCTGCTGCCT
CGTCCAGGTCCATGGCCTGCATCGCCTGGGCTGTTTTGTAACCAGCGGGA
AAACAGGAGCGCCGTCTGCCTCAACCTGGTTGGCCTCCATGTCAGGCGAC
CGTTTGCGAATGAGGTTTTACAGGCGGGGACAGATGCGGTGTTTTTTAGG
AACGGAGGAATCTCAAAACAATGACGGTCGAGCTCAGCCGCTAGCCCGGC
CAGACGTGGATGATAATGCAGGAGGTCTGCGTCAAGACGCCGGAGGGCCC
TCATCCCTCGCCACGATGGGTCAACGTGCGTTCGTCATCACCCCGCACCA
GCATGGAAACCGCCATCTTGAAAGCCTGCTACATTTGGCAGGACGGGAGA
AGCATAAGTTTTCCAGCGCCTTGAAGGAGCTGGAACACCACGTCCAACTT
GAGGTAGCTGAGGCGCTAATCTTCAACATACGATTGACGCTAGCAGCCCC
CGTAACAATTATTTTTGTGGGGTGGCGGCTTATTTGGAGAAGGACTACGC
ACGAGCTCACAAATACTTCGCGGAAGCCCTCTCTCTCGCGCAGACCGCTG
CTCTGGTGTCGAATGCACGCATGACACAGGGCAAGTATGACGCAGGTAGC
GTCTGTCTTGCGAACAAAGAGATGCCTATGGATGAGTATTTGCATGTACA
GTGTCGGCTAGGTATGGACTTGGCAAGCACGCAGATAACTCAGACAAGTG
CTCATCCATAACGCTGCTGGCACGCATCTTCAAAAACATTGACTTAATGC
TAGCCAAGAGCCCGGAGCTGAAAGGCGGCGCGCCTTTCATCATAAAAGGC
ATGATGTTCCTGAATGCCCCCATGCCCGTGCGCAGCGTGAGAAAGGCAAA
GGAGTGCTTCCAGACGGCACATCAGGAAACACACGAACGGGGGAATGCTT
CCGTCTGCCGATGGATCCTCGCCCAAGCTGAGTGCTGAGCAGCGCGACGT
GGTCATCGAATATATCCCCGAGGTGTTGCAAATCATGGACCGCCTGGAGG
AACACGGGCATCACCATCGCGACGCCCGTGTCTCCCTCTACGCGACAGAG
GCCCTCAGCTACGAGGTCTCCACCACCTCTCTCGTCAAGGCCGCACATGG
CCGTTTTGGTCAGGTCAAACTCGAAAATAATGCTGTCATTTGGGATGGTA
TTCCTGCATGTAATAATGACACTCTGCTGCCTCGTCCAGGTCCATGGCCT
GCATCGCCTGGGCTGTTTTGTAACCAGCGGGAAAACAGGAGCGCCGTCTG
CCTCAACCTGGTTGGCCTCCATGTCAGGCGACCGTTTGCGAATGAGGTTT
TACAGGCGGGGACAGATGCGGTGTTTTTTAGGAACGGAGGAATCTCAAAA
CAATGACGGTCGAGCTCAGCCGCTAGCCCGGCCAGACGTGGATGATAATG
CAGGAGGTCTGCGTCAAGACGCCGGAGGGCCCTCATCCCTCGCCACGATG
GGTCAACGTGCGTTCGTCATCACCCCGCACCAGCATGGAAACCGCCATCT
TGAAAGCCTGCTACATTTGGCAGGACGGGAGAAGCATAAGTTTTCCAGCG
CCTTGAAGGAGCTGGAACACCACGTCCAACTTGAGGTAGCTGAGGCGCTA
ATCTTCAACATACGATTGACGCTAGCAGCCCCCGTAACAATTATTTTTGT
GGGGTGGCGGCTTATTTGGAGAAGGACTACGCACGAGCTCACAAATACTT
CGCGGAAGCCCTCTCTCTCGCGCAGACCGCTGCTCTGGTGTCGAATGCAC
GCATGACACAGGGCAAGTATGACGCAGGTAGCGTCTGTCTTGCGAACAAA
GAGATGCCTATGGATGAGTATTTGCATGTACAGTGTCGGCTAGGTATGGA
CTTGGCAAGCACGCAGATAACTCAGACAAGTGCTCATCCATAACGCTGCT
GGCACGCATCTTCAAAAACATTGACTTAATGCTAGCCAAGAGCCCGGAGC
TGAAAGGCGGCGCGCCTTTCATCATAAAAGGCATGATGTTCCTGAATGCC
CCCATGCCCGTGCGCAGCGTGAGAAAGGCAAAGGAGTGCTTCCAGACGGC
ACATCAGGAAACACACGAACGGGGGAATGCTTCCGTCTGCCGATGGATCC
TCGCCCAAGCTGAGTGCTGAGCAGCGCGACGTGGTCATCGAATATATCCC
CGAGGTGTTGCAAATCATGGACCGCCTGGAGGAACACGGGCATCACCATC
GCGACGCCCGTGTCTCCCTCTACGCGACAGAGGCCCTCAGCTACGAGGTC
TCCACCACCTCTCTCGTCAAGGCCGCACATGGCCGTTTTGGTCAGGTCAA
ACTCGAAAATAATGCTGTCATTTGGGATGGTATTCCTGCATGTAATAATG
ACACTCTGCTGCCTCGTCCAGGTCCATGGCCTGCATCGCCTGGGCTGTTT
TGTAACCAGCGGGAAAACAGGAGCGCCGTCTGCCTCAACCTGGTTGGCCT
CCATGTCAGGCGACCGTTTGCGAATGAGGTTTTACAGGCGGGGACAGATG
CGGTGTTTTTTAGGAACGGAGGAATCTCAAAACAATGACGGTCGAGCTCA
GCCGCTAGCCCGGCCAGACGTGGATGATAATGCAGGAGGTCTGCGTCAAG
ACGCCGGAGGGCCCTCATCCCTCGCCACGATGGGTCAACGTGCGTTCGTC
ATCACCCCGCACCAGCATGGAAACCGCCATCTTGAAAGCCTGCTACATTT
GGCAGGACGGGAGAAGCATAAGTTTTCCAGCGCCTTGAAGGAGCTGGAAC
ACCACGTCCAACTTGAGGTAGCTGAGGCGCTAATCTTCAACATACGATTG
ACGCTAGCAGCCCCCGTAACAATTATTTTTGTGGGGTGGCGGCTTATTTG
GAGAAGGACTACGCACGAGCTCACAAATACTTCGCGGAAGCCCTCTCTCT
CGCGCAGACCGCTGCTCTGGTGTCGAATGCACGCATGACACAGGGCAAGT
ATGACGCAGGTAGCGTCTGTCTTGCGAACAAAGAGATGCCTATGGATGAG
TATTTGCATGTACAGTGTCGGCTAGGTATGGACTTGGCAAGCACGCAGAT
AACTCAGACAAGTGCTCATCCATAACGCTGCTGGCACGCATCTTCAAAAA
CATTGACTTAATGCTAGCCAAGAGCCCGGAGCTGAAAGGCGGCGCGCCTT
TCATCATAAAAGGCATGATGTTCCTGAATGCCCCCATGCCCGTGCGCAGC
GTGAGAAAGGCAAAGGAGTGCTTCCAGACGGCACATCAGGAAACACACGA
ACGGGGGAATGCTTCCGTCTGCCGATGGATCCTCGCCCAAGCTGAGTGCT
GAGCAGCGCGACGTGGTCATCGAATATATCCCCGAGGTGTTGCAAATCAT
GGACCGCCTGGAGGAACACGGGCATCACCATCGCGACGCCCGTGTCTCCC
TCTACGCGACAGAGGCCCTCAGCTACGAGGTCTCCACCACCTCTCTCGTC
AAGGCCGCACATGGCCGTTTTGGTCAGGTCAAACTCGAAAATAATGCTGT
CATTTGGGATGGTATTCCTGCATGTAATAATGACACTCTGCTGCCTCGTC
CAGGTCCATGGCCTGCATCGCCTGGGCTGTTTTGTAACCAGCGGGAAAAC
AGGAGCGCCGTCTGCCTCAACCTGGTTGGCCTCCATGTCAGGCGACCGTT
TGCGAATGAGGTTTTACAGGCGGGGACAGATGCGGTGTTTTTTAGGAACG
GAGGAATCTCAAAACAATGACGGTCGAGCTCAGCCGCTAGCCCGGCCAGA
CGTGGATGATAATGCAGGAGGTCTGCGTCAAGACGCCGGAGGGCCCTCAT
CCCTCGCCACGATGGGTCAACGTGCGTTCGTCATCACCCCGCACCAGCAT
GGAAACCGCCATCTTGAAAGCCTGCTACATTTGGCAGGACGGGAGAAGCA
TAAGTTTTCCAGCGCCTTGAAGGAGCTGGAACACCACGTCCAACTTGAGG
TAGCTGAGGCGCTAATCTTCAACATACG back to top
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