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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100001g131.8282.mrna |
| Orig protein id | gnl|cribi|Naga_100001g131.8282 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:569612..571241 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3989 ID=rna3989|Name=rna3989|organism=Nannochloropsis gaditana|type=mRNA|length=2763bp
AGGGCAATTCAGCACGTGGGAGTGGGCATACAGCCGCCCAGGGTATTTAT
GTCTTCCTCCGCGCTGCCATCCGGAAAAAGACTGGACCTTTTTCATGTCG
AATGGTCACGACATGAAGCCGGCTATGACCGTGGCTACACGACAGCATGC
TATGAAAACCTCGCATGCGAGACGCAGGGGCGAGAAAAATAAGTGTTGCG
TCTGGAAAGCAAGTACACGCTCGGGTACACCCTCGACGCGAAACTAATTT
TCTACGTAAAATTACTCCATACACATAGGTTGCGGTCTAGCTTGCTTAAG
AGAGAATCAAGCCTCATGAAGGGAAGCCTGCTTTCATTTCTGGCATTGCT
GGTCGCGACTAGGGCCTGGCTGCCCGTCCGGCACCCGAGCTTGCCCTCTC
GCGTAGCCCTCAGGAGACCCTTGCCTTCGGGACAGGCCATGCGCCACCAT
CACACGCTCCGGATGGCAGACAGTGCTCCACCCACACAACTCACGCAGGC
AGAAATAGTTCCATCGGAGCCTTTCCGGCCCGATTTGGGTGTAGGGAGGG
AGGCGAAGTTGACCAAGGTCCTCGAGCTCAACGAAGGCGCCGTCAACTTC
GTCCGCGTGCGTGTGGATGAGCTCACCCTCTCTGCAGTGAAAAAGATGAA
TGAGAAAGGGGCGGATTGCTGCTTGATCTTCAACCCAGATGGCAGCCTGG
CCGGTATCTTCACCGAACGGGACTACATCCGAAAGATCGTTGAAGCTCAA
CGGCGCACGAAAGAGACGCCCATCGAGGAGGTGATGACCTCCGCCGACCT
GGTTGTGAGTGCGCCGCCCGATATGACTGTGGGCGAATGCATGTCTCTGA
TGGTCCAGAACAAAATCCGGCACATCCCCGTCCGCGCCGTGCCAGAGGGG
GTGGTGATGGGCGTCATCTCCACCACGGACCTGGTCAACACGATGAAGCT
GGACGACGAGAGCTTGGCGGGGGCCTTCCCCATCGGGGCCTTGGAGCCCT
CCCTGGTCCAAGATATTCTGAGCCGGACCCGGGAGCGCGCGAACGAGCTG
GCTGTGAAGGCGGGCCCGAGGTTGGGGATGCAGGACTTGGTGCGGGGAGG
CTGGGTGGGCGTGGGCGCCGGCGTCCTCGCCCTGCTCCTTCAGGGGAACT
GGCTGCACGACCACGAGGTACTGTCCATGTGCGCCATCTTCGGGCTCGGG
TACGTGAGCATCATCTTCGAGAACATCTTCGAGTTCAACAAAGCGGCCGT
GGGGCTCCTGATGGCCGTGGCCCTCTGGGTCATCTACGCGGGCACGGCGG
GGGCCCAGGGGGTGGCGTCCGCGGGGGCGCTCAAGGAGCTGGCGGAGCAC
GTCTCGGAGGTGTCGGAGATCATTTTCTTCCTGCTCGGGGCCATGACCAT
CGTGGAGATAGTGGACTCGCACCAGGGCTTCCGCGTGGTCACGGACCTGA
TCAAGACCAAGAGCAAGAAGGCCCTCATGTGGACTGTGGGTCTGCTCGCT
TTCTTCATGAGCTCCGTCCTGGACAACCTCACCACCACCATTGTCCTCCT
CTCCCTCCTGCGCAAGCTCATCCCCAACACGGAAGCCCGCAAGCTCTTCG
GCGCCCTGGTGGTGATCGCCTCCAACGCGGGCGGGGCCTGGACCCCCATC
GGCGACCTCACGACCACCATGCTCTGGATCAATGGCCAGATCTCCGCCCT
GCCCACCATGCGAGACCTGGCGGTGCCCTCGCTCGTCTCCCTCCTCATCA
GCACCTACCTCCTGACCTGGGGCATCCCCGACACGGATCGCGAGTTTGAA
GAGGAGATGGCGCGCAACCAGCAGAACGCCGTCAACACCGAGCTGGCACC
CCGAGGAAAGCTTGTCTTTGCCACGGGGCTGACGGGCCTCCTGAGCGTGC
CCGTGTTCAAGGCGCTGACGGGCCTGCCCCCCTACCTCGGCATGCTCTCC
GCCCTGGGTGTCATGTGGGTCCTCACGGACACCATCCACGCCGGTGAGGA
GGAGGAGGAGCTCAAGGTGCCGGCAGCCCTCGCCAAGATCGACGTGTCGG
GCATCCTTTTCTTCTTCGGAATCTTGCTGTCTGTGGGCGCGCTCGACTCG
GCTGGAATCCTCCAATCTTTGGCCTCCTTCCTTCAGTCCCACATCCCCTC
CGACAAAATCATCGCCACCCTCATCGGCATCTTCAGTGCCATCATCGACA
ACGTGCCCTTGGTCGCTGCGACCATGTCGATGTATGATCTCCAAACCACG
CCCATGGATGCCCCTCTCTGGCAGCTGGTCGCCTACTGCGCCGGCACGGG
AGGCTCGCTATTGGTGATAGGCAGTGCTGCCGGCGTAGCTCTCATGGGCC
TTGAGAAAGTCGACTTTCTCTGGTACTTCAAAAAGATAACATTCGCAGCA
TTCATAGGCTATATGGGAGGTGTCGGCACATATCTCGCTGTTAAATACGG
TCTGGCGTCGGCCGTGAGTGCAGCTGTCTTACCTATCGTATCCAGCGTTT
TTGATGGCAAGATTCCCCTTATTAGTGGCATGTAGAATATTTATTTCACA
GAAAATAACCCACATATTGCGGTGGGAAAGCTAATAAATGGGGCAACTGC
ATATTAAAGCTCCGATTATAGACATGCCAGGCACTTAGGGTCAGTTTAAA
ACGTGCAGTAGTGTGTTAATTAAAGTGAAAAATGTGCTTCATGTCGTCAT
AATATAAGCTCTTCCTCGCTGCTCGCGTCCATTAAAAAAACATCGCAGTA
TGGAACGGGAAAC back to topprotein sequence of rna3989 >rna3989-protein ID=rna3989-protein|Name=rna3989|organism=Nannochloropsis gaditana|type=polypeptide|length=266bp
MARDSLFLLGAGIASMALLYYVVVGPPGKAGSNDERDDDQPALSKRKLVS
VWSMLVKNMELHKYQVQQVLYQQRAQLAQQGTEVPDEDIEAMYKQNFEEI
LENVQTQILEHFDVAEDEFEAATECYKDDSEVSGMVHQLEALYRGDSGAP
GEKDAVRDVGAEELERIIKTDFGEAWCSAFEKTARDFQAQGKDMTEADQE
LLLEFHTQASGHAQDNLAESLKKYSLTPADFQHLVLIHQEDSRIKQALDQ
SQNVQREALARLGFRS back to topmRNA from alignment at CM002462.1:569612..571241+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3989 ID=rna3989|Name=rna3989|organism=Nannochloropsis gaditana|type=mRNA|length=1630bp|location=Sequence derived from alignment at CM002462.1:569612..571241+ (Nannochloropsis gaditana)
TCAGAATGCTCACACTCTCATGTAGCCTATGAGAACAGGGAAACCCCTGA
AATTGTCTCCCTGAGTCGATGCACAGATCCTCATCAATCTATCCCATGTC
ATCTGCGTCGACACAGAAGAGCATCGCACAGCACCCTTAGTATCCTCAAG
GCGACAAACATCATGGCCCGCGACTCCTTGTTTCTACTGGGCGCGGGCAT
AGCGTCTATGGCACTATTGTATTATGTGGTGGTGGGACCCCCGGGAAAGG
CTGGCAGCAACGATGAAAGAGGTATGTCTATTCGATGAAAGGAGTTTGTT
ATATTTGATGTGCATGTGCTGGGCTTGGACCTATCTTGGTGGAGGGCAGG
GGTTAACCCGCTCCAACTGCTGAACCCTACACTACCCCATCATTCCGAGC
AGATGACGACCAACCGGCACTGAGCAAACGAAAGCTCGTCAGTGTCTGGA
GCATGCTCGTGAAGAATATGGAGCTCCATAAGTACCAGGTCCAGCAGGTG
TTGTACCAGCAGCGGGCTCAATTGGCGCAGCAGGGCACCGAGGTTCCGGA
CGAGGACATCGGTAGGTAACTTCCTAGGTCTCAACACCATAGCATGGACG
TGCGTGGTTGTGAGACAGATGTCTGTATGATAAATGCGGGCAGGCAGGGC
GAGCCTGGGCGAGACAGGGCTCAATTGCCGCATTTCACTTCACATTCCTC
TTAACTTCCGCACCGCAGAGGCCATGTACAAGCAAAACTTCGAGGAGATC
CTAGAAAATGTGCAGACCCAAATTCTAGAGCATTTTGATGTCGCCGAGGA
TGAGTTCGAGGCAGCCACTGAATGCTACAAAGACGATTCGGAGGTGTCGG
GCATGGTTCATCAGTTGGAGGCCTTGTATCGAGGTGACAGCGGAGCGCCC
GGGGAGAAAGACGCAGTGCGCGATGTAGGCGCAGAGGAGCTCGAGCGAAT
TATAAAAACCGATTTTGGAGAGGCCTGGTGCAGCGCGTTTGAGAAGACGG
CTCGGGATTTCCAAGCCCAAGGCAAGGACATGACGGAGGCCGACCAGGAG
TTGCTTCTCGAGTTCCACACACAGGCTTCGGGTCACGCCCAGGACAATCT
GGCAGAGGTGAGTGGGCCCAACGACTAGCCGAAAATGTCAGGCGGAGATT
GTTATTGTCTTTTGTCATGAACCAATGCTTTCACTTTCCCTACGCACAAC
TCAGTCACTGAAAAAGTACAGCCTGACGCCCGCGGATTTCCAGCACCTGG
TGCTGATCCACCAGGAAGATTCGCGCATCAAGCAAGCGCTAGATCAATCC
CAAAATGTGCAGCGTGAGGCCTTGGCTCGCCTCGGTTTCCGGTCTTAGTC
GCCGCGGGGGCTCTGTAGCAAAAGGGATAGGCCTAGGTGTGTAGAACTCT
GCCGCCTCGATGCTTGTTAAATATGAGAAATTGATGCAATAAGGATAGGT
AGTCATTTCGAAGAATCAAAACATGTTTCCGGTTTCGCGACAATAAAGCA
AAATGAAGTGCGATGTCAATAAAAGGACCTCAGTAGGTTCGATATCCATG
CTTCACTTGTTTTAATACATTTGGGACTTGGTGTCTGTGTGTGTGTATGT
ACAAAGAACTTAATTTTTATTAGCAGCATT back to topCoding sequence (CDS) from alignment at CM002462.1:569612..571241+ >rna3989 ID=rna3989|Name=rna3989|organism=Nannochloropsis gaditana|type=CDS|length=3204bp|location=Sequence derived from alignment at CM002462.1:569612..571241+ (Nannochloropsis gaditana)
ATGGCCCGCGACTCCTTGTTTCTACTGGGCGCGGGCATAGCGTCTATGGC
ACTATTGTATTATGTGGTGGTGGGACCCCCGGGAAAGGCTGGCAGCAACG
ATGAAAGAGATGACGACCAACCGGCACTGAGCAAACGAAAGCTCGTCAGT
GTCTGGAGCATGCTCGTGAAGAATATGGAGCTCCATAAGTACCAGGTCCA
GCAGGTGTTGTACCAGCAGCGGGCTCAATTGGCGCAGCAGGGCACCGAGG
TTCCGGACGAGGACATCGAGGCCATGTACAAGCAAAACTTCGAGGAGATC
CTAGAAAATGTGCAGACCCAAATTCTAGAGCATTTTGATGTCGCCGAGGA
TGAGTTCGAGGCAGCCACTGAATGCTACAAAGACGATTCGGAGGTGTCGG
GCATGGTTCATCAGTTGGAGGCCTTGTATCGAGGTGACAGCGGAGCGCCC
GGGGAGAAAGACGCAGTGCGCGATGTAGGCGCAGAGGAGCTCGAGCGAAT
TATAAAAACCGATTTTGGAGAGGCCTGGTGCAGCGCGTTTGAGAAGACGG
CTCGGGATTTCCAAGCCCAAGGCAAGGACATGACGGAGGCCGACCAGGAG
TTGCTTCTCGAGTTCCACACACAGGCTTCGGGTCACGCCCAGGACAATCT
GGCAGAGTCACTGAAAAAGTACAGCCTGACGCCCGCGGATTTCCAGCACC
TGGTGCTGATCCACCAGGAAGATTCGCGCATCAAGCAAGCGCTAGATCAA
TCCCAAAATGTGCAGCGTGAGGCCTTGGCTCGCCTCGGTTTCCGGTCTTA
GATGGCCCGCGACTCCTTGTTTCTACTGGGCGCGGGCATAGCGTCTATGG
CACTATTGTATTATGTGGTGGTGGGACCCCCGGGAAAGGCTGGCAGCAAC
GATGAAAGAGATGACGACCAACCGGCACTGAGCAAACGAAAGCTCGTCAG
TGTCTGGAGCATGCTCGTGAAGAATATGGAGCTCCATAAGTACCAGGTCC
AGCAGGTGTTGTACCAGCAGCGGGCTCAATTGGCGCAGCAGGGCACCGAG
GTTCCGGACGAGGACATCGAGGCCATGTACAAGCAAAACTTCGAGGAGAT
CCTAGAAAATGTGCAGACCCAAATTCTAGAGCATTTTGATGTCGCCGAGG
ATGAGTTCGAGGCAGCCACTGAATGCTACAAAGACGATTCGGAGGTGTCG
GGCATGGTTCATCAGTTGGAGGCCTTGTATCGAGGTGACAGCGGAGCGCC
CGGGGAGAAAGACGCAGTGCGCGATGTAGGCGCAGAGGAGCTCGAGCGAA
TTATAAAAACCGATTTTGGAGAGGCCTGGTGCAGCGCGTTTGAGAAGACG
GCTCGGGATTTCCAAGCCCAAGGCAAGGACATGACGGAGGCCGACCAGGA
GTTGCTTCTCGAGTTCCACACACAGGCTTCGGGTCACGCCCAGGACAATC
TGGCAGAGTCACTGAAAAAGTACAGCCTGACGCCCGCGGATTTCCAGCAC
CTGGTGCTGATCCACCAGGAAGATTCGCGCATCAAGCAAGCGCTAGATCA
ATCCCAAAATGTGCAGCGTGAGGCCTTGGCTCGCCTCGGTTTCCGGTCTT
AGATGGCCCGCGACTCCTTGTTTCTACTGGGCGCGGGCATAGCGTCTATG
GCACTATTGTATTATGTGGTGGTGGGACCCCCGGGAAAGGCTGGCAGCAA
CGATGAAAGAGATGACGACCAACCGGCACTGAGCAAACGAAAGCTCGTCA
GTGTCTGGAGCATGCTCGTGAAGAATATGGAGCTCCATAAGTACCAGGTC
CAGCAGGTGTTGTACCAGCAGCGGGCTCAATTGGCGCAGCAGGGCACCGA
GGTTCCGGACGAGGACATCGAGGCCATGTACAAGCAAAACTTCGAGGAGA
TCCTAGAAAATGTGCAGACCCAAATTCTAGAGCATTTTGATGTCGCCGAG
GATGAGTTCGAGGCAGCCACTGAATGCTACAAAGACGATTCGGAGGTGTC
GGGCATGGTTCATCAGTTGGAGGCCTTGTATCGAGGTGACAGCGGAGCGC
CCGGGGAGAAAGACGCAGTGCGCGATGTAGGCGCAGAGGAGCTCGAGCGA
ATTATAAAAACCGATTTTGGAGAGGCCTGGTGCAGCGCGTTTGAGAAGAC
GGCTCGGGATTTCCAAGCCCAAGGCAAGGACATGACGGAGGCCGACCAGG
AGTTGCTTCTCGAGTTCCACACACAGGCTTCGGGTCACGCCCAGGACAAT
CTGGCAGAGTCACTGAAAAAGTACAGCCTGACGCCCGCGGATTTCCAGCA
CCTGGTGCTGATCCACCAGGAAGATTCGCGCATCAAGCAAGCGCTAGATC
AATCCCAAAATGTGCAGCGTGAGGCCTTGGCTCGCCTCGGTTTCCGGTCT
TAGATGGCCCGCGACTCCTTGTTTCTACTGGGCGCGGGCATAGCGTCTAT
GGCACTATTGTATTATGTGGTGGTGGGACCCCCGGGAAAGGCTGGCAGCA
ACGATGAAAGAGATGACGACCAACCGGCACTGAGCAAACGAAAGCTCGTC
AGTGTCTGGAGCATGCTCGTGAAGAATATGGAGCTCCATAAGTACCAGGT
CCAGCAGGTGTTGTACCAGCAGCGGGCTCAATTGGCGCAGCAGGGCACCG
AGGTTCCGGACGAGGACATCGAGGCCATGTACAAGCAAAACTTCGAGGAG
ATCCTAGAAAATGTGCAGACCCAAATTCTAGAGCATTTTGATGTCGCCGA
GGATGAGTTCGAGGCAGCCACTGAATGCTACAAAGACGATTCGGAGGTGT
CGGGCATGGTTCATCAGTTGGAGGCCTTGTATCGAGGTGACAGCGGAGCG
CCCGGGGAGAAAGACGCAGTGCGCGATGTAGGCGCAGAGGAGCTCGAGCG
AATTATAAAAACCGATTTTGGAGAGGCCTGGTGCAGCGCGTTTGAGAAGA
CGGCTCGGGATTTCCAAGCCCAAGGCAAGGACATGACGGAGGCCGACCAG
GAGTTGCTTCTCGAGTTCCACACACAGGCTTCGGGTCACGCCCAGGACAA
TCTGGCAGAGTCACTGAAAAAGTACAGCCTGACGCCCGCGGATTTCCAGC
ACCTGGTGCTGATCCACCAGGAAGATTCGCGCATCAAGCAAGCGCTAGAT
CAATCCCAAAATGTGCAGCGTGAGGCCTTGGCTCGCCTCGGTTTCCGGTC
TTAG back to top
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