EWM26771.1, cds3979 (CDS) Nannochloropsis gaditana

Overview
NameEWM26771.1
Unique Namecds3979
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:569774..569882 +
Alignment locationCM002462.1:570014..570172 +
Alignment locationCM002462.1:570330..570718 +
Alignment locationCM002462.1:570816..570959 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM26771.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g131.8282.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:569774..569882 +
CM002462.1supercontigCM002462.1:570014..570172 +
CM002462.1supercontigCM002462.1:570330..570718 +
CM002462.1supercontigCM002462.1:570816..570959 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM26771.1 vs. NCBI_GenBank
Match: gi|585108859|gb|EWM26771.1| (hypothetical protein Naga_100001g131 [Nannochloropsis gaditana])

HSP 1 Score: 546.969 bits (1408), Expect = 0.000e+0
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0 
Query:    1 MARDSLFLLGAGIASMALLYYVVVGPPGKAGSNDERDDDQPALSKRKLVSVWSMLVKNMELHKYQVQQVLYQQRAQLAQQGTEVPDEDIEAMYKQNFEEILENVQTQILEHFDVAEDEFEAATECYKDDSEVSGMVHQLEALYRGDSGAPGEKDAVRDVGAEELERIIKTDFGEAWCSAFEKTARDFQAQGKDMTEADQELLLEFHTQASGHAQDNLAESLKKYSLTPADFQHLVLIHQEDSRIKQALDQSQNVQREALARLGFRS 266
            MARDSLFLLGAGIASMALLYYVVVGPPGKAGSNDERDDDQPALSKRKLVSVWSMLVKNMELHKYQVQQVLYQQRAQLAQQGTEVPDEDIEAMYKQNFEEILENVQTQILEHFDVAEDEFEAATECYKDDSEVSGMVHQLEALYRGDSGAPGEKDAVRDVGAEELERIIKTDFGEAWCSAFEKTARDFQAQGKDMTEADQELLLEFHTQASGHAQDNLAESLKKYSLTPADFQHLVLIHQEDSRIKQALDQSQNVQREALARLGFRS
Sbjct:    1 MARDSLFLLGAGIASMALLYYVVVGPPGKAGSNDERDDDQPALSKRKLVSVWSMLVKNMELHKYQVQQVLYQQRAQLAQQGTEVPDEDIEAMYKQNFEEILENVQTQILEHFDVAEDEFEAATECYKDDSEVSGMVHQLEALYRGDSGAPGEKDAVRDVGAEELERIIKTDFGEAWCSAFEKTARDFQAQGKDMTEADQELLLEFHTQASGHAQDNLAESLKKYSLTPADFQHLVLIHQEDSRIKQALDQSQNVQREALARLGFRS 266
The following BLAST results are available for this feature:
BLAST of EWM26771.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108859|gb|EWM26771.1|0.000e+0100.00hypothetical protein Naga_100001g131 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3989rna3989Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications