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Properties
| Property Name | Value |
|---|
| Product | mitochondrial import inner membrane translocase subunit tim22 |
| Orig transcript id | gnl|cribi|Naga_100001g133.8273.mrna |
| Orig protein id | gnl|cribi|Naga_100001g133.8273 |
| Gene | TIM22 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:565332..566546 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3987 ID=rna3987|Name=rna3987|organism=Nannochloropsis gaditana|type=mRNA|length=2348bp
GTCACTGCGAATTTATTGCACGCACATGCTTATACTTCAGGGATATTCAC
CATGGAGGTTCTTGTCTTAGGATCTGGTGGTCGAGAGCACGCCATAGCCC
TCAAGCTGGCCGAATCCAACAAAGTCACGCACGTTTACGTGGCGCCGGGG
AATGGTGGGACTGCGAAATCTCACGACAAAGTCTCCAATCTAGACTTCGA
CGCAGTCGATCTGCCCAAGCTTCTTGCTTTTGCGAATGAACACAAAATCG
AGTTAGTAGTGGTTGGTCCTGAAGCACCCCTTGTCGTTGGTGCCGTGGAC
ACGTTTGCAGCTGCTGGCTTTCCTTGCTTTGGCCCCACGGCTGCCGCCGC
CAGACTCGAGGCCTCCAAGGCCTTCTCCAAGGATTTCATGGCCCGGCACG
GCATTCCCACCGCCAGATACGGAAATTTTACCAAATATGAGGAGGCGGTG
GCTTTTGTGGAGTCAGCAGACTTCCCCGTGGTGATCAAAGCCTCGGGCCT
CGCAGCTGGCAAGGGCGTCCTCCTCCCGACGACCAAGGCGGAAGCGCTGG
CGGGCTTGAAGGAGATCATGCTTGAAAAGGCCTTCGGGACGGCCGGGGAC
GAGGTGGTTGTGGAACAATACTTGGAGGGCGAGGAGGCATCGGTCTTGGC
GTTTTGCGACGGCAAGCGGGTGGTCCTGATGCCGGGGGCTCAAGACCACA
AGCGCGCGCTGGACGGCGACATGGGTCTCAACACGGGCGGTATGGGGGCG
TACGCGCCGGCGCCGATCCTAACTCCAGCAATAAGAGCCAAAGCACAGGC
CATCCTGCAGAGAACGGTAGACGGTATGGCCGCGGAGGGCTCTCCTTATC
AGGGCGTCCTCTACGGAGGCTTCATGGTCTCCAAGGAGGGGGAGCCGGTG
GTGCTCGAGTACAATTGTCGTTTCGGGGACCCGGAAACCCAGGTTCTTCT
CCCACTGCTAGACTCGGACCTTGCTGAGGTCTTCCTCGCCTGCATTGAGG
GCCGCTTGAGTCCCGAGATCGTACGATGGAAGGCACTGGCGGCCTCTACA
GTGGTGATGGCGGCCAAAGGCTACCCGGAGGCGTATCCGAAGGGGATGGT
GATCGAGGGCCTTGCGACGGTGCAGGCCTCGGAGGACGGACAGGCGGGAA
GGGTCACGGTGTACCACGCCGGGACCAAGACGGGCGCCCCGGGCGAGGTC
CTCGCGAACGGGGGCCGGGTCCTGGCCGTGACGGGGCTCGGGCGGGACAT
CGCCGACTCGCTGGCCAAGGCCTACGCGGCAGTGCGGCTCATCCGAATGG
ACCCGTGCCACTACCGCACTGACATCGGCCAGAGGGCTCTGAGGGGGCCG
TGCCCGCTTCGGGTGGGCGTCCTGGGCTCCACGCGGGGGTCGGCTCTGCA
GATGGTGCTGGAGGCGATGGAGGCGGACGAGCTGGTCGGGGCGCGCGTCG
TCTTAGTGCTCTCCAACAAGGAGGACGCGGGCATACTGGCCCGGGCCCGC
CGGTTCGGGATACCTGCACAGAGCATTTCCTCCAAGGGGAAGACACGCGA
GGCTTTCGACGCGGAGGCTACGGAGCTGATGGCGGCCGCGGGCGTGGAGC
TGGTTCTGCTGGTGGGCTACATGCGCATCCTCTCGCCCTCCTTTTGCCAG
CGGTGGAAGGACCGGTGCTTGAACGTGCACCCGTCCTTGTTACCGGACTT
CGCGGGGGGCATGGACCTGGACGTGCATGCGGCTGTGATAGCGGCCGGGC
GGGCAGAGAGCGGATGCTCGGTGCACTTTGTCACCGAGGAGGTGGACGCG
GGCCCAGTCCTCGTGCAGGCGCGCACCGTCCTCTCGCCTGGGGAGACGCC
TGAGAGTCTTAAGGCGAAGGTTCAGCCCCTGGAGGGGCCAGCCTTCGTGA
CAGCCATCCAGAAGTTCATGGCGGGGGAGGTGGGTCCGTCGAGAAAGACG
TGAGGCCGGAGGGGGCCGGTTCGCTCCTGACGCGCGTGCCCCGTCGAGCC
GGCGAAATTGTGCCGCCACTTCTTGATCAATGATTGCTAGGTTCCGTTTC
TCGTGCATAGGATTCTCCGGGGGGAAAGCAAGAAGGCGCGATTGAGCGAA
AATGTAAGCCAGCACGTGAATTGCTTGAGGCTTTTATACAGATTTATCAG
TGTCTCTATCGGGACGTGGGCTCTTTTGTCAGATCGTTAGGTTTGTAGTT
ATCATTCCGTAAAGCAAAGCAAAACAGAAAGTAACCCTTGTGGCAATCCA
CCAAGCAGAATCGCTTTACTTAATGCGGCCCCATCACCACCTCCATGATT
CCAGAAAAGGCTGCAAAGCCAGCACATCCCAAACACGCCGCCTGTGGG back to topprotein sequence of rna3987 >rna3987-protein ID=rna3987-protein|Name=rna3987|organism=Nannochloropsis gaditana|type=polypeptide|length=207bp
MSGPSHPHPPADVPTTPSAAEHKYPAAELKCSKPDLLFTSPPPFPLPFYK
YVSLPQTPAGMVAVAPPNPQENCVGRSVFGAVAGAGLGVMMGIFLGAMGD
MSPAIPIINGREAPQAPAGEQLRLAYRATFERCGHWARNFMALTALFSGV
DCVVEKFRGKHDAYNAVISGCGVGAALSAKQGPQAACLGCAGFAAFSGIM
EVVMGPH back to topmRNA from alignment at CM002462.1:565332..566546- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna3987 ID=rna3987|Name=rna3987|organism=Nannochloropsis gaditana|type=mRNA|length=1215bp|location=Sequence derived from alignment at CM002462.1:565332..566546- (Nannochloropsis gaditana)
CGAGCACTTCTGGCCGAGGATGCCATCAACGTCCAGCGTCTCCCGGAGCC
GGGCGTTATACTCCCAGTTACACCCACACAATGGCAGGAGCCGGCACGAA
ATGTATATTTTATGTGGGAAATATGTGCACTCTCTGACTGCTCAACTTGC
TATACATGTGCGAAATTACATCGTTCGCGGCGCGAGGGACTTGATGGTAC
ACTGTCTCATAGCAGATGATTGCAGAGCTATCACTAGTGCAAATCAAATT
GGAAAACTCAGTGTTTGCCTGCTTGTCCCCTAACACTTTTACAGAGTTGG
GACAACCTTCGCAAGATGTCAGGTCCAAGTCATCCTCATCCACCCGCGGA
CGTCCCAACCACCCCATCAGCTGCTGAACACAAGTATCCGGCTGCAGAGC
TGAAATGCTCGAAGCCGGATTTGCTATTTACCTCCCCGCCGCCTTTTCCC
CTGCCTTTTTACAAGTATGTCTCACTACCACAGACGCCAGCTGGTATGGT
TGCGGTAGCCCCTCCCAACCCTCAGGAGAACTGCGTAGGCCGTAGTGTGT
TCGGAGCTGTGGCTGGGGCGGGTCTAGGGGTGATGATGGGCATTTTTTTG
GGTGCCATGGGGGACATGTCGCCCGCCATCCCCATAATTAACGGTCGCGA
AGCACCTCAGGCGCCTGCAGGGGAGCAGCTGCGACTGGCTTATCGTGCTA
CCTTTGAGCGGTGCGGGCACTGGGCAAGAAACTTCATGGCGCTTACGGCA
TTGTTTTCGGGCGTGGACTGCGTGGTGGAGAAATTTCGCGGGAAGCACGA
CGCGTACAACGCGGTGATATCAGGGTGTGGAGTGGGTGCAGCGCTCTCAG
CCAAGCAAGGCCCACAGGCGGCGTGTTTGGGATGTGCTGGCTTTGCAGCC
TTTTCTGGAATCATGGAGGTGGTGATGGGGCCGCATTAAGTAAAGCGATT
CTGCTTGGTGGATTGCCACAAGGGTTACTTTCTGTTTTGCTTTGCTTTAC
GGAATGATAACTACAAACCTAACGATCTGACAAAAGAGCCCACGTCCCGA
TAGAGACACTGATAAATCTGTATAAAAGCCTCAAGCAATTCACGTGCTGG
CTTACATTTTCGCTCAATCGCGCCTTCTTGCTTTCCCCCCGGAGAATCCT
ATGCACGAGAAACGGAACCTAGCAATCATTGATCAAGAAGTGGCGGCACA
ATTTCGCCGGCTCGA back to topCoding sequence (CDS) from alignment at CM002462.1:565332..566546- >rna3987 ID=rna3987|Name=rna3987|organism=Nannochloropsis gaditana|type=CDS|length=624bp|location=Sequence derived from alignment at CM002462.1:565332..566546- (Nannochloropsis gaditana)
ATGTCAGGTCCAAGTCATCCTCATCCACCCGCGGACGTCCCAACCACCCC
ATCAGCTGCTGAACACAAGTATCCGGCTGCAGAGCTGAAATGCTCGAAGC
CGGATTTGCTATTTACCTCCCCGCCGCCTTTTCCCCTGCCTTTTTACAAG
TATGTCTCACTACCACAGACGCCAGCTGGTATGGTTGCGGTAGCCCCTCC
CAACCCTCAGGAGAACTGCGTAGGCCGTAGTGTGTTCGGAGCTGTGGCTG
GGGCGGGTCTAGGGGTGATGATGGGCATTTTTTTGGGTGCCATGGGGGAC
ATGTCGCCCGCCATCCCCATAATTAACGGTCGCGAAGCACCTCAGGCGCC
TGCAGGGGAGCAGCTGCGACTGGCTTATCGTGCTACCTTTGAGCGGTGCG
GGCACTGGGCAAGAAACTTCATGGCGCTTACGGCATTGTTTTCGGGCGTG
GACTGCGTGGTGGAGAAATTTCGCGGGAAGCACGACGCGTACAACGCGGT
GATATCAGGGTGTGGAGTGGGTGCAGCGCTCTCAGCCAAGCAAGGCCCAC
AGGCGGCGTGTTTGGGATGTGCTGGCTTTGCAGCCTTTTCTGGAATCATG
GAGGTGGTGATGGGGCCGCATTAA back to top
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