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Properties
| Property Name | Value |
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100001g136.8095.mrna |
| Orig protein id | gnl|cribi|Naga_100001g136.8095 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002462.1 | supercontig | CM002462.1:559356..561808 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3984 ID=rna3984|Name=rna3984|organism=Nannochloropsis gaditana|type=mRNA|length=2052bp ATGAACCCGCGTCTTCCAGGCGGACTCGACACCCCTTTAGCCGACATGTG GCGTTCTGCGCCCATTGGAGAGCTACCACCGTACTTGCCACAAGACAACG GGTGCCGTCTGGAGGCAGGCCTCCTGAAAATGCAAGCCAGAGCTCTGCAG ACTCTCCTCAAGATGAAGTTCCCTGCTTTCGCGAGCCACATTCTCTACAA TACCCAGTTGGAAAGTTTCCTTGACACGTATTTGAACTACGCCCCCCGGC CCTACGAGGCGGCTATCGACCGTCGGATCGGGACATCGGACAGGTTCGAA AGCTCTTTGCAGGGCGTCGAGGCTGTCCGTACTGCCCTGCACCGGTCGGT CTTGCTCGCCTACCTCCGATTTTTTACGAGCCACGAAGAGCAGCAGCAAG TCCCGTCTTTCGCGACACTTGCCAGTCAGTCTCACGTCATGGACATTCCC CGGGCGTTGGACCTCTGCAACCTGTACGGCTTCACGGACGCAGGTCTGCT GGCTCGCCTCCTCTTGGGTGCCATTGCATTCGTGGAGAGCGGCCTACTCT CGCAACTCGAAGACGCCTGCCGCTCTGTCAGCGAGATATTCTCTGACCTA GAGGGAGCTGTCGCGTCGGGAAGCGGTGATGGAGAGACTCAGGACGCCTT AGAGTATCTCACCGACGTGACGGGAGGCCTGAGCCGGCTGGTCCTCGCCG TGCCCCTGACTTCCTTGGGACTGGCATCGACTCCCCGTCTCTTCGGGGGA TTGGGGCGGATTTACGACGTGCTGATAGCGCGATTCGAGGCCGAGGGAGA GACCAGGGGCTGCAGTTCTAATGGAGAGAGGGCATGTAAGTACGCAGGCT TCGCGTGTGGGTGCGCGAGGGCTCTCGTTGGGGGCGTGGTGGCCGGCCTC CTCGCGCTGGCTCGCACGCGCGAGGGGGCTCTCGAGGCTCTTTTCACCTT TATCAGCGAGCTTATTCAGACGACCGACGCAGACGAGGAGGCGGACGAGG GAGGACAGGGAATGGGTCGGCTCGTCCGGGACTGCGCGGGCGGGCTTCTG AGCCGCTTGCAGGCCTTCCTGTCGGCGCCTGCCGATGAGCAACGTCCGGC TCCCGACATGTCTGGCGTATCGTACCTAATAGAGCTTCTGAGGAGCACCA CGGGTGGATATGAGGCCCCTACACCGCGGACAGGACTCTTCATCAAAGAG CCCCGGGCCGGACGCGGGGCGGAAGGGGAACGGCGAGTCCAGCGGCCGGC CCGGAGCGTGGAGGCGATGGTCCAGGAAGTGAGGCAGGTCTGTCCGGGAC TGGGAGAGGGATTCGTTCATGCCTGCCTCGCCGTTATGGGCTACAACATA AACATGGTGGTGAACGCCCTGTTGGAGGGAAGTGCCTTGCCCTACCCGCT CGACACCCTGGACCGATCGCTGCCCTCTCCCCTCGGCGCGGATAAGCTCC GGAAGAAAGGAGGAGAGGAGGCGGAGGAGGCCCGCGACGAGGAATTCATC GCCCGGCAGAAAGCGTACCTTCGTCAGATGGAGAAGGACGCCGAGGAAGA CGCATATCTGTTGCAAGAGTACGACGACGATTTCGATGACCAATATTCAG GGGAACAGACAATGTTTTCTCGCGATAACACTCGAGAGGATTTCGAGGCG ATTAGAAAATATAACAATCTAATGAGAAAGGAAGAGGAAGAGGAACATTT CTGGGAAGGAATGCAACTCAAGCAGCCCGAATTGCCTACAATCGCAAGGG ACAGTGAGGACGACGACAAGGATTCGAGGGGGAGGACAAAAGAGCCTAAA TCGAGCTCCCAGACAGTATTGTCTGGTTCTGGTTCTTTCTTCATAAATGC TAGAGAAAAATCGAGAGTTAGAGGTACTAGCGGATCGCTTTTAAGTAGAG GAGAAAGCGCTGCGCAAGGAAGAGGTGAAGATGGCGCCACCAGTCATCCC ATGAGCGCGCTCGCGAGACGGAGGAAGGAAAAACAAAAACACTTGCGTGC AAACCATAACCGCAAGGTTAAGGCAGTGCGTAAATCAGGAGTTAATCTCT GA back to topprotein sequence of rna3984 >rna3984-protein ID=rna3984-protein|Name=rna3984|organism=Nannochloropsis gaditana|type=polypeptide|length=799bp MSEVHVPDTGDLPGLDSLLDVILGPTLAELYGADIALLERIECKLGMVLD RHHPEKVEAFNEMVSMTKSPMIKEKNLQVFVKSIMTALVEDASRPPPPAS APTKAKASATRRVIGGNNKRRSAAGKAGGGGGAPGKRVKRASAAASKSSP ADSDVSSLDEISRSSSSDDGDAGRNKKSVTIRKPVVAIESYDSVMADSDW QMRGQLHLVERCPALVYSSWRDADHDVYLYQFPQLAAAKREAKGIIAFFM GFGLYKEFTAAAFKSIVMPGDQPSRLRSREDIFAFLEKGSQLRSTAKGGS GEGARRKAYVATWQFFQKNVFKEAVTEADPFPPLARRVPNKGKKRASTSS SMPKKPRPRAPSAPVPPLPPASLPVAVPAPSPPPPSTSALSPPPPSSLGM TSTGEAKSKDEAGVTVTSSEGAPSPLGEVAQDGAVATAGGVWNTMPDPED RSIRGLFASLRWRLLRLEETWEGGDQFVWTLKSSQSNIDNLCDSLFGDAG DPEADDWRRMVSSSLDKARRKLEDKLRALGGQGGNAATGKPAYVHGRALL DVYSELKEAVAGFEEGKEAEVEGWDSLDFPVRGLTFAPTTVAATSAASVS EPGAVLPSAEGAEPAVAGKEDSPEGAEEENREHGEENGGTREFGGGDRAR EVGDVHGSGEESPPAGVAPEQSEEGKNVRPEQSGKEEDVGKERLEPISAK LPGGLLEEGPALPSVSKAAAADSDPLLKACVDSENGPSQGGSPLSSRDSN SKASPGGKPEGDGGQFQFVEREELAPRDLRKCTFAKRTKWLQRNHVIKD back to topmRNA from alignment at CM002462.1:559356..561808+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3984 ID=rna3984|Name=rna3984|organism=Nannochloropsis gaditana|type=mRNA|length=2453bp|location=Sequence derived from alignment at CM002462.1:559356..561808+ (Nannochloropsis gaditana) ATGTCAGAAGTGCACGTGCCAGATACGGGGGATCTTCCTGGACTGGACAG
TCTCTTAGACGTGATTCTCGGACCCACCCTGGCCGAACTCTACGGCGCCG
ACATAGCCCTCCTCGAGCGCATCGAGTGCAAGCTGGGAATGGTATTGGAC
AGACATCATCCAGAGAAGGTGGAAGCTTTCAATGAGATGGTGAGTATGAC
AAAGTCACCAATGATCAAGGAGAAAAATTTGCAGGTGTTCGTAAAGAGCA
TCATGACGGCTCTAGTCGAGGACGCGTCacggccaccccctccgGCGTCA
GCTCCGACCAAAGCCAAGGCTAGCGCCACCAGAAGAGTCATTGGAGGCAA
TAATAAGCGCAGAAGCGCGGCAGGTAAagcaggaggtggcggcggggcaC
CGGGGAAACGCGTGAAAAGGGCGTCCGCGGCAGCATCGAAGTCCTCCCCA
GCAGATAGTGATGTGTCCTCGCTGGATGAGATCAGCAGATCCAGCTCCTC
AGACGATGGAGACGCGGGCAGGAATAAGAAAAGTGTGACTATACGCAAAC
CAGTCGTAGCAATAGAGAGCTACGACTCGGTTATGGCCGACTCGGACTGG
CAGATGCGCGGGCAGCTCCATTTGGTGGAGCGCTGCCCCGCCTTAGTCTA
CAGCTCCTGGCGCGACGCTGATCATGACGTCTATCTCTACCAGTTTCCTC
AGCTGGCCGCCGCGAAACGTGAGGCTAAAGGCATTATCGCCTTCTTCATG
GGTTTCGGACTTTACAAAGAATTCACCGCCGCAGCTTTCAAGAGCATAGT
CATGCCGGGAGATCAGCCCTCACGCCTCCGGTCGCGGGAGGATATCTTTG
CATTCCTGGAGAAAGGCTCACAGCTGCGCTCTACCGctaagggaggaagt
ggggaaGGTGCCCGGCGCAAAGCGTACGTAGCTACGTGGCAGTTTTTCCA
AAAAAATGTTTTCAAGGAGGCGGTCACCGAGGCCgacccctttcctccct
tggcgCGCCGCGTGCCCAAtaagggaaagaagcgggcgtctacctcctcc
tcgatgcccAAAAAGCCGCGCCCCCGCGCCCCTTCGGCGCCCGTACCTCC
GCTCCCCCCGGCGTCCCTGCCTGTTGctgtccctgccccctcccctcccc
ccccctccacgagCGCActgtcgcctccccccccttcctctctagGCATG
ACAAGCACAGGCGAAGCGAAGAgcaaggacgaggcgggcgtTACGGTCAC
GTCATCGGAGGgagccccctccccgctgGGAGAGGTGGCTCAGGACGGGG
CAGTAGCGACGGCCGGGGGAGTGTGGAACACGATGCCAGACCCGGAGGAC
CGCTCCATCCGCGGGCTCTTCGCATCATTGCGCTGGCGCCTGCTCCGACT
AGAGGAGACctgggagggtggggacCAGTTTGTTTGGACGCTCAAGAGCT
CGCAGAGCAACATCGACAACTTATGCGACAGCCTCTTTGGGGACGcaggc
gacccggaggcggACGATTGGCGACGGATGGTAAGCAGCAGCCTAGACAA
GGCGCGCAGGAAGCTGGAGGACAAGCTGCGGGCCTtgggaggccaggggg
ggaatgCCGCTACTGGGAAGCCCGCCTATGTGCATGGGCGGGCGCTTTTA
GACGTGTACTCGGAGCtgaaagaggcggtggcgggattcgaggaagggaa
ggaggccgaggTCGAGGGCTGGGACAGCCTGGACTTTCCCGTGCGTGGAC
TCACGTTTGCGCCGACTACTGTAGCAGCCACCTCGGCGGCGTCAGTCTCA
GAGCCGGGTGCCGTGTTGCCGAGCGCGGAGGGCGCGGAGCCTGCGGTGGC
GGGCAAGGAAGACAgcccggagggggcggaagaggaaaacaGGGAacatg
gggaggagaatggagGAACGAGAGAGTTCGGAGGTGGAGACAGGGCGCGT
GAGGTGGGAGACGTACACGGTAGTGGAGAGGAGTCGCCGCCTGCGGGTGT
GGCCCCCGAgcagagcgaggaagggaaaaatgTGAGGCCCGAGCagagcg
ggaaggaagaggatgtaGGCAAGGAGAGGTTGGAGCCCATTTCCGCGAAG
CTCCCGGGAGGGCTGCTAGAAGAAGGGCCGGCCCTGCCTTCCGTCTCGAA
AGCTGCAGCAGCGGACTCCGATCCCCTCCTGAAAGCTTGCGTCGACTCCG
AGAACGGGCCGTCCCAGGGCGGAagccccctttcttcccgtgATTCTAAT
TCGAAAGCATCCCCGTAAGGACAACTAGAAAAGTGTGAACCGAGCGCCGA
CTAAaatggcagggaagggggggaaagccggagggagatggaggacagTT
CCAGTTTGTCGAGAGGGAAGAGCTGGCTCCGAGAGACCTGAGAAAATGCA
CATTTGCTAAACGTACCAAGTGGTTGCAAAGAAATCATGTCATTAAAGAC
TAA back to topCoding sequence (CDS) from alignment at CM002462.1:559356..561808+ >rna3984 ID=rna3984|Name=rna3984|organism=Nannochloropsis gaditana|type=CDS|length=4800bp|location=Sequence derived from alignment at CM002462.1:559356..561808+ (Nannochloropsis gaditana) ATGTCAGAAGTGCACGTGCCAGATACGGGGGATCTTCCTGGACTGGACAG TCTCTTAGACGTGATTCTCGGACCCACCCTGGCCGAACTCTACGGCGCCG ACATAGCCCTCCTCGAGCGCATCGAGTGCAAGCTGGGAATGGTATTGGAC AGACATCATCCAGAGAAGGTGGAAGCTTTCAATGAGATGGTGAGTATGAC AAAGTCACCAATGATCAAGGAGAAAAATTTGCAGGTGTTCGTAAAGAGCA TCATGACGGCTCTAGTCGAGGACGCGTCacggccaccccctccgGCGTCA GCTCCGACCAAAGCCAAGGCTAGCGCCACCAGAAGAGTCATTGGAGGCAA TAATAAGCGCAGAAGCGCGGCAGGTAAagcaggaggtggcggcggggcaC CGGGGAAACGCGTGAAAAGGGCGTCCGCGGCAGCATCGAAGTCCTCCCCA GCAGATAGTGATGTGTCCTCGCTGGATGAGATCAGCAGATCCAGCTCCTC AGACGATGGAGACGCGGGCAGGAATAAGAAAAGTGTGACTATACGCAAAC CAGTCGTAGCAATAGAGAGCTACGACTCGGTTATGGCCGACTCGGACTGG CAGATGCGCGGGCAGCTCCATTTGGTGGAGCGCTGCCCCGCCTTAGTCTA CAGCTCCTGGCGCGACGCTGATCATGACGTCTATCTCTACCAGTTTCCTC AGCTGGCCGCCGCGAAACGTGAGGCTAAAGGCATTATCGCCTTCTTCATG GGTTTCGGACTTTACAAAGAATTCACCGCCGCAGCTTTCAAGAGCATAGT CATGCCGGGAGATCAGCCCTCACGCCTCCGGTCGCGGGAGGATATCTTTG CATTCCTGGAGAAAGGCTCACAGCTGCGCTCTACCGctaagggaggaagt ggggaaGGTGCCCGGCGCAAAGCGTACGTAGCTACGTGGCAGTTTTTCCA AAAAAATGTTTTCAAGGAGGCGGTCACCGAGGCCgacccctttcctccct tggcgCGCCGCGTGCCCAAtaagggaaagaagcgggcgtctacctcctcc tcgatgcccAAAAAGCCGCGCCCCCGCGCCCCTTCGGCGCCCGTACCTCC GCTCCCCCCGGCGTCCCTGCCTGTTGctgtccctgccccctcccctcccc ccccctccacgagCGCActgtcgcctccccccccttcctctctagGCATG ACAAGCACAGGCGAAGCGAAGAgcaaggacgaggcgggcgtTACGGTCAC GTCATCGGAGGgagccccctccccgctgGGAGAGGTGGCTCAGGACGGGG CAGTAGCGACGGCCGGGGGAGTGTGGAACACGATGCCAGACCCGGAGGAC CGCTCCATCCGCGGGCTCTTCGCATCATTGCGCTGGCGCCTGCTCCGACT AGAGGAGACctgggagggtggggacCAGTTTGTTTGGACGCTCAAGAGCT CGCAGAGCAACATCGACAACTTATGCGACAGCCTCTTTGGGGACGcaggc gacccggaggcggACGATTGGCGACGGATGGTAAGCAGCAGCCTAGACAA GGCGCGCAGGAAGCTGGAGGACAAGCTGCGGGCCTtgggaggccaggggg ggaatgCCGCTACTGGGAAGCCCGCCTATGTGCATGGGCGGGCGCTTTTA GACGTGTACTCGGAGCtgaaagaggcggtggcgggattcgaggaagggaa ggaggccgaggTCGAGGGCTGGGACAGCCTGGACTTTCCCGTGCGTGGAC TCACGTTTGCGCCGACTACTGTAGCAGCCACCTCGGCGGCGTCAGTCTCA GAGCCGGGTGCCGTGTTGCCGAGCGCGGAGGGCGCGGAGCCTGCGGTGGC GGGCAAGGAAGACAgcccggagggggcggaagaggaaaacaGGGAacatg gggaggagaatggagGAACGAGAGAGTTCGGAGGTGGAGACAGGGCGCGT GAGGTGGGAGACGTACACGGTAGTGGAGAGGAGTCGCCGCCTGCGGGTGT GGCCCCCGAgcagagcgaggaagggaaaaatgTGAGGCCCGAGCagagcg ggaaggaagaggatgtaGGCAAGGAGAGGTTGGAGCCCATTTCCGCGAAG CTCCCGGGAGGGCTGCTAGAAGAAGGGCCGGCCCTGCCTTCCGTCTCGAA AGCTGCAGCAGCGGACTCCGATCCCCTCCTGAAAGCTTGCGTCGACTCCG AGAACGGGCCGTCCCAGGGCGGAagccccctttcttcccgtgATTCTAAT TCGAAAGCATCCCCggggggaaagccggagggagatggaggacagTTCCA GTTTGTCGAGAGGGAAGAGCTGGCTCCGAGAGACCTGAGAAAATGCACAT TTGCTAAACGTACCAAGTGGTTGCAAAGAAATCATGTCATTAAAGACTAA ATGTCAGAAGTGCACGTGCCAGATACGGGGGATCTTCCTGGACTGGACAG TCTCTTAGACGTGATTCTCGGACCCACCCTGGCCGAACTCTACGGCGCCG ACATAGCCCTCCTCGAGCGCATCGAGTGCAAGCTGGGAATGGTATTGGAC AGACATCATCCAGAGAAGGTGGAAGCTTTCAATGAGATGGTGAGTATGAC AAAGTCACCAATGATCAAGGAGAAAAATTTGCAGGTGTTCGTAAAGAGCA TCATGACGGCTCTAGTCGAGGACGCGTCacggccaccccctccgGCGTCA GCTCCGACCAAAGCCAAGGCTAGCGCCACCAGAAGAGTCATTGGAGGCAA TAATAAGCGCAGAAGCGCGGCAGGTAAagcaggaggtggcggcggggcaC CGGGGAAACGCGTGAAAAGGGCGTCCGCGGCAGCATCGAAGTCCTCCCCA GCAGATAGTGATGTGTCCTCGCTGGATGAGATCAGCAGATCCAGCTCCTC AGACGATGGAGACGCGGGCAGGAATAAGAAAAGTGTGACTATACGCAAAC CAGTCGTAGCAATAGAGAGCTACGACTCGGTTATGGCCGACTCGGACTGG CAGATGCGCGGGCAGCTCCATTTGGTGGAGCGCTGCCCCGCCTTAGTCTA CAGCTCCTGGCGCGACGCTGATCATGACGTCTATCTCTACCAGTTTCCTC AGCTGGCCGCCGCGAAACGTGAGGCTAAAGGCATTATCGCCTTCTTCATG GGTTTCGGACTTTACAAAGAATTCACCGCCGCAGCTTTCAAGAGCATAGT CATGCCGGGAGATCAGCCCTCACGCCTCCGGTCGCGGGAGGATATCTTTG CATTCCTGGAGAAAGGCTCACAGCTGCGCTCTACCGctaagggaggaagt ggggaaGGTGCCCGGCGCAAAGCGTACGTAGCTACGTGGCAGTTTTTCCA AAAAAATGTTTTCAAGGAGGCGGTCACCGAGGCCgacccctttcctccct tggcgCGCCGCGTGCCCAAtaagggaaagaagcgggcgtctacctcctcc tcgatgcccAAAAAGCCGCGCCCCCGCGCCCCTTCGGCGCCCGTACCTCC GCTCCCCCCGGCGTCCCTGCCTGTTGctgtccctgccccctcccctcccc ccccctccacgagCGCActgtcgcctccccccccttcctctctagGCATG ACAAGCACAGGCGAAGCGAAGAgcaaggacgaggcgggcgtTACGGTCAC GTCATCGGAGGgagccccctccccgctgGGAGAGGTGGCTCAGGACGGGG CAGTAGCGACGGCCGGGGGAGTGTGGAACACGATGCCAGACCCGGAGGAC CGCTCCATCCGCGGGCTCTTCGCATCATTGCGCTGGCGCCTGCTCCGACT AGAGGAGACctgggagggtggggacCAGTTTGTTTGGACGCTCAAGAGCT CGCAGAGCAACATCGACAACTTATGCGACAGCCTCTTTGGGGACGcaggc gacccggaggcggACGATTGGCGACGGATGGTAAGCAGCAGCCTAGACAA GGCGCGCAGGAAGCTGGAGGACAAGCTGCGGGCCTtgggaggccaggggg ggaatgCCGCTACTGGGAAGCCCGCCTATGTGCATGGGCGGGCGCTTTTA GACGTGTACTCGGAGCtgaaagaggcggtggcgggattcgaggaagggaa ggaggccgaggTCGAGGGCTGGGACAGCCTGGACTTTCCCGTGCGTGGAC TCACGTTTGCGCCGACTACTGTAGCAGCCACCTCGGCGGCGTCAGTCTCA GAGCCGGGTGCCGTGTTGCCGAGCGCGGAGGGCGCGGAGCCTGCGGTGGC GGGCAAGGAAGACAgcccggagggggcggaagaggaaaacaGGGAacatg gggaggagaatggagGAACGAGAGAGTTCGGAGGTGGAGACAGGGCGCGT GAGGTGGGAGACGTACACGGTAGTGGAGAGGAGTCGCCGCCTGCGGGTGT GGCCCCCGAgcagagcgaggaagggaaaaatgTGAGGCCCGAGCagagcg ggaaggaagaggatgtaGGCAAGGAGAGGTTGGAGCCCATTTCCGCGAAG CTCCCGGGAGGGCTGCTAGAAGAAGGGCCGGCCCTGCCTTCCGTCTCGAA AGCTGCAGCAGCGGACTCCGATCCCCTCCTGAAAGCTTGCGTCGACTCCG AGAACGGGCCGTCCCAGGGCGGAagccccctttcttcccgtgATTCTAAT TCGAAAGCATCCCCggggggaaagccggagggagatggaggacagTTCCA GTTTGTCGAGAGGGAAGAGCTGGCTCCGAGAGACCTGAGAAAATGCACAT TTGCTAAACGTACCAAGTGGTTGCAAAGAAATCATGTCATTAAAGACTAA back to top
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