EWM26584.1, cds3974 (CDS) Nannochloropsis gaditana

Overview
NameEWM26584.1
Unique Namecds3974
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:559356..561619 +
Alignment locationCM002462.1:561673..561808 +

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Properties
Property NameValue
Protein idEWM26584.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100001g136.8095.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:559356..561619 +
CM002462.1supercontigCM002462.1:561673..561808 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM26584.1 vs. NCBI_GenBank
Match: gi|585108672|gb|EWM26584.1| (hypothetical protein Naga_100001g136 [Nannochloropsis gaditana])

HSP 1 Score: 1602.8 bits (4149), Expect = 0.000e+0
Identity = 799/799 (100.00%), Postives = 799/799 (100.00%), Query Frame = 0 
Query:    1 MSEVHVPDTGDLPGLDSLLDVILGPTLAELYGADIALLERIECKLGMVLDRHHPEKVEAFNEMVSMTKSPMIKEKNLQVFVKSIMTALVEDASRPPPPASAPTKAKASATRRVIGGNNKRRSAAGKAGGGGGAPGKRVKRASAAASKSSPADSDVSSLDEISRSSSSDDGDAGRNKKSVTIRKPVVAIESYDSVMADSDWQMRGQLHLVERCPALVYSSWRDADHDVYLYQFPQLAAAKREAKGIIAFFMGFGLYKEFTAAAFKSIVMPGDQPSRLRSREDIFAFLEKGSQLRSTAKGGSGEGARRKAYVATWQFFQKNVFKEAVTEADPFPPLARRVPNKGKKRASTSSSMPKKPRPRAPSAPVPPLPPASLPVAVPAPSPPPPSTSALSPPPPSSLGMTSTGEAKSKDEAGVTVTSSEGAPSPLGEVAQDGAVATAGGVWNTMPDPEDRSIRGLFASLRWRLLRLEETWEGGDQFVWTLKSSQSNIDNLCDSLFGDAGDPEADDWRRMVSSSLDKARRKLEDKLRALGGQGGNAATGKPAYVHGRALLDVYSELKEAVAGFEEGKEAEVEGWDSLDFPVRGLTFAPTTVAATSAASVSEPGAVLPSAEGAEPAVAGKEDSPEGAEEENREHGEENGGTREFGGGDRAREVGDVHGSGEESPPAGVAPEQSEEGKNVRPEQSGKEEDVGKERLEPISAKLPGGLLEEGPALPSVSKAAAADSDPLLKACVDSENGPSQGGSPLSSRDSNSKASPGGKPEGDGGQFQFVEREELAPRDLRKCTFAKRTKWLQRNHVIKD 799
            MSEVHVPDTGDLPGLDSLLDVILGPTLAELYGADIALLERIECKLGMVLDRHHPEKVEAFNEMVSMTKSPMIKEKNLQVFVKSIMTALVEDASRPPPPASAPTKAKASATRRVIGGNNKRRSAAGKAGGGGGAPGKRVKRASAAASKSSPADSDVSSLDEISRSSSSDDGDAGRNKKSVTIRKPVVAIESYDSVMADSDWQMRGQLHLVERCPALVYSSWRDADHDVYLYQFPQLAAAKREAKGIIAFFMGFGLYKEFTAAAFKSIVMPGDQPSRLRSREDIFAFLEKGSQLRSTAKGGSGEGARRKAYVATWQFFQKNVFKEAVTEADPFPPLARRVPNKGKKRASTSSSMPKKPRPRAPSAPVPPLPPASLPVAVPAPSPPPPSTSALSPPPPSSLGMTSTGEAKSKDEAGVTVTSSEGAPSPLGEVAQDGAVATAGGVWNTMPDPEDRSIRGLFASLRWRLLRLEETWEGGDQFVWTLKSSQSNIDNLCDSLFGDAGDPEADDWRRMVSSSLDKARRKLEDKLRALGGQGGNAATGKPAYVHGRALLDVYSELKEAVAGFEEGKEAEVEGWDSLDFPVRGLTFAPTTVAATSAASVSEPGAVLPSAEGAEPAVAGKEDSPEGAEEENREHGEENGGTREFGGGDRAREVGDVHGSGEESPPAGVAPEQSEEGKNVRPEQSGKEEDVGKERLEPISAKLPGGLLEEGPALPSVSKAAAADSDPLLKACVDSENGPSQGGSPLSSRDSNSKASPGGKPEGDGGQFQFVEREELAPRDLRKCTFAKRTKWLQRNHVIKD
Sbjct:    1 MSEVHVPDTGDLPGLDSLLDVILGPTLAELYGADIALLERIECKLGMVLDRHHPEKVEAFNEMVSMTKSPMIKEKNLQVFVKSIMTALVEDASRPPPPASAPTKAKASATRRVIGGNNKRRSAAGKAGGGGGAPGKRVKRASAAASKSSPADSDVSSLDEISRSSSSDDGDAGRNKKSVTIRKPVVAIESYDSVMADSDWQMRGQLHLVERCPALVYSSWRDADHDVYLYQFPQLAAAKREAKGIIAFFMGFGLYKEFTAAAFKSIVMPGDQPSRLRSREDIFAFLEKGSQLRSTAKGGSGEGARRKAYVATWQFFQKNVFKEAVTEADPFPPLARRVPNKGKKRASTSSSMPKKPRPRAPSAPVPPLPPASLPVAVPAPSPPPPSTSALSPPPPSSLGMTSTGEAKSKDEAGVTVTSSEGAPSPLGEVAQDGAVATAGGVWNTMPDPEDRSIRGLFASLRWRLLRLEETWEGGDQFVWTLKSSQSNIDNLCDSLFGDAGDPEADDWRRMVSSSLDKARRKLEDKLRALGGQGGNAATGKPAYVHGRALLDVYSELKEAVAGFEEGKEAEVEGWDSLDFPVRGLTFAPTTVAATSAASVSEPGAVLPSAEGAEPAVAGKEDSPEGAEEENREHGEENGGTREFGGGDRAREVGDVHGSGEESPPAGVAPEQSEEGKNVRPEQSGKEEDVGKERLEPISAKLPGGLLEEGPALPSVSKAAAADSDPLLKACVDSENGPSQGGSPLSSRDSNSKASPGGKPEGDGGQFQFVEREELAPRDLRKCTFAKRTKWLQRNHVIKD 799
The following BLAST results are available for this feature:
BLAST of EWM26584.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585108672|gb|EWM26584.1|0.000e+0100.00hypothetical protein Naga_100001g136 [Nannochlorop... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna3984rna3984Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications