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Properties
| Property Name | Value |
|---|
| Product | chaperone activity of bc1 complex- mitochondrial-like protein |
| Orig transcript id | gnl|cribi|Naga_100001g142.8244.mrna |
| Orig protein id | gnl|cribi|Naga_100001g142.8244 |
| Gene | ABC1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:541239..543208 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3977 ID=rna3977|Name=rna3977|organism=Nannochloropsis gaditana|type=mRNA|length=1912bp
GCTAAGATTCACATCGAGCAAGGACGGGAAGTAGTTGATCCCATAGTTTC
TTGAAGCCCGCTCGCTCACAGACCCCTCTCTCGCCAACTTATCTTCAGTG
CCACCATTCTACCCATCGACAATCTCACACAGATAGGCCCCGTGCGTAGA
TATGCGGCGCCACGCAACTTCTGTTGTACCAGCCGCTGTAAATAATTTCT
CGTCCGCATCATTGCCCAAGGCCAAAATAAGCCTGTCGAGGCTTTGCAAG
GATTTGATTCTGCGCATGGCCACCATGTTACCGGTAAGCGACCGCAAGGA
AATAATGGCCCAGTGGATGGCACAGGAAAGCTCAATTTACACAGATATTG
CAACTGTCGAAAATCAACTTTTGCGCATGCGATTGGAGGTGGAGACGGCG
AAGGCTTCCCACGTTTCGGCACTTCAAGAAGTGGAGCGACTGAGGGAACG
AATTACGTTTCAAACTAAGATAAAACCCGAGGACTCGAGTCATCCCGTTC
TCGGACAACTAATTGCTGACATGGGCTACAAAAAAGTATACTGTGCCACG
ATCAACCAGCTAGCTGATGTTCCCATATGGGAGAAGCAACGAATACTCAG
GCGGGAAAGAGCAGAATCCATCGCACGTGAAAAGATGCGACAATCCTTTC
CTGTAAAGTTGCCGGGCATTATTACATTATATCAGCTTGCAGACAAACAA
TACAAGCTCTTGGACGGGCAGCATCGACTAGCTGCTTTGAAAATTCTTGC
CGACTCTGGCATTATTAGTAAAGACAATAATTTCTGCCTTCTGGAAGTGT
TCACGTTGGAGAAAGAATCCGAGGCCCGCGCTCTATTTCTTGAGATCAAC
AGTGCCATGCCAGTCAAGCTGATTGATTTGCCCGATGGTGGAGCGCGGCC
GGATATTAAAGGGATTATTGACGGTGCAGTGGATAACCTCGTGTCTCAAT
TCCCGGCATTTTTCAAAAGCAGCTTGAATCCCAAGCTCCCACATGTCAAC
ATTGACAATATGCGCGACGCCCTTTTTCAGCACCACATTGTCGAGCGTCA
CGGACACAAGAGTGCAGTCGAACTGTTAAAATGGCTGCAAGATGCGAACG
AGAATCTCTCAACAAAGCACGATCGAGACTGGAAACGCATCTTCAAAGGT
CGTAATCCGCTTGTGATAGAAAAAGCTGTAGCGAAGGCGAAAAAGGGTGG
CTTTTACCTCGGCCTGGACAACCGGTGGCTCGCTTTCGAAGGATAATAAA
CCTGTGCCTTGACTTTAATCCATGTCCCAATGCGATGCATAATGCCTTAC
AAAAATGCAGTCTTGAAAGGAATGTGGCACCATCGGGTGGAGAGGCAGGC
GTAGCTTCTCTTGGCTTTTTGAAGCACATGCCCTTTCCGCTTGTGACCCG
ATTTCTGTTAGGCAAATCCTGGGCTAAGGACCGACAAGCTTTTCGAAAAA
GCTATTCCTGTATACAAGATGAGGCGCGAACAACATAACGCTTGAGCTAT
ACCGCTAATGAAGGTGCATTGAAGAAATTCCCGACGCCTTTCGTCGGGCG
TATTGCGAGCCAGAAAATCTGATATTGCTTGTTGTGCATTACAATATTCC
TCAAGCGAACTACTGGTTCTTTGTACTGGTAGCAATTTTACCGTTCGCTG
CTTCATAGTTTATTTTCAGTATACATCTTGTGAGTTTCCTCCAGCAAATC
TCGGCATGGAATTACAGCTTTTAGCTTGATACAGAGCAGAAATGCTCCCG
CGAGCTTCCGGTGTAGAGAGTAGGCTTCTCGAGGTGGGGGAGTAAGGCGA
TGATTCATGAATGTTTTGCCGTGATGCGATATTCGCACAGTCATGTTGCT
TCCGTGAAAGTCGAACGGCTCGTGATTTACGAAGGGTTCGCCTACGACAA
GCCCGGCGCTCT back to topprotein sequence of rna3977 >rna3977-protein ID=rna3977-protein|Name=rna3977|organism=Nannochloropsis gaditana|type=polypeptide|length=625bp
MRSNDAMRVLQGATLVVENMMRENVNAPRRMVSQFLDTAQNVAGRSPDMS
KEGLHKIVRPDPPASGEDFPSGKTTSSYFSEQANSSSTTSSMAAKTSDAE
PVGPPTASGPVSSRNYEAQTRPLLARTREEDSSLLKMSTEASSSQEALRQ
ALADSETVVAPFRDSPLPKYEQKERSVPASPLSRVLGFGSLAARLAVTGA
YEAVRRQIVMTASDQEAPGSSSAEARPRTLLSDRSAEHIAETLCKMRGAA
LKLGQMMSLQDEGILPEPLTKALERVRQGADVMPRAQLHAQLEAELGAGW
RARFRTFGEKPVAAASIGQVHRARTIDGRDVAVKVQYPGVGDSIESDLKN
LKRLVTYLNVLPPGLYVDEILDVAREELILECDYKLEAQNQERFKLLVES
DPALVPHVLVPGVVSDLSSRQVLTSEWMTGEPVDRVVALDQDIRNRVARL
ILLLTLRELFDWRFMQTDPNWSNFLYDRSTGKLALLDFGASRSYQKAFVD
KYLELVWAAANRDTSKLMIASHQLGFLTGDESTQMLRAHESAGLVVGEPF
VNHEPFDFHGSNMTVRISHHGKTFMNHRLTPPPREAYSLHRKLAGAFLLC
IKLKAVIPCRDLLEETHKMYTENKL back to topmRNA from alignment at CM002462.1:541239..543208- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3977 ID=rna3977|Name=rna3977|organism=Nannochloropsis gaditana|type=mRNA|length=1970bp|location=Sequence derived from alignment at CM002462.1:541239..543208- (Nannochloropsis gaditana)
ATGCGTTCCAACGATGCCATGAGGGTACTACAAGGTGCCACTTTGGTGGT
TGAGAATATGATGCGTGAGGTAGGTTGGACACGATGTACTTTATACGTCC
GTGGGGAAAACTTTGACTACACCTCACAAAAATCACTCCGCATTCCCAAT
CCCACTCGTAGAATGTGAATGCACCACGCAGAATGGTCTCTCAGTTTTTG
GACACAGCACAGAATGTGGCGGGTCGTTCTCCAGACATGTCGAAAGAGGG
TTTGCACAAAATTGTGCGGCCTGACCCGCCAGCTTCCGGGGAAGATTTTC
CTAGCGGCAAGACCACTTCGTCCTATTTTTCTGAGCAAGCCAATAGCAGC
TCGACAACCTCTTCCATGGCAGCAAAAACGTCTGATGCAGAACCTGTTGG
GCCACCGACTGCATCTGGGCCTGTCTCTTCACGAAATTACGAGGCGCAAA
CACGCCCTCTTCTAGCCCGCACTCGGGAGGAAGACTCGTCTCTCCTGAAG
ATGAGCACGGAGGCCTCCTCGAGCCAAGAAGCCCTTCGCCAAGCCCTGGC
GGATTCTGAAACGGTTGTCGCACCCTTTAGAGATTCCCCTTTACCGAAAT
ATGAGCAGAAGGAGCGGTCTGTGCCCGCCTCACCTCTCTCCCGCGTTTTG
GGGTTTGGTAGTCTGGCAGCTCGTCTTGCCGTGACTGGGGCCTACGAGGC
TGTCCGGAGGCAAATAGTCATGACGGCCTCGGATCAGGAGGCGCCAGGAT
CTTCCTCTGCTGAAGCAAGGCCTCGAACGCTCTTGTCTGACAGAAGCGCC
GAGCACATTGCAGAGACCCTGTGCAAGATGCGAGGCGCCGCACTGAAGCT
CGGGCAGATGATGAGCTTACAGGACGAAGGAATTCTTCCAGAGCCGTTGA
CGAAGGCCTTGGAGCGAGTACGACAGGGTGCGGACGTGATGCCGCGTGCG
CAACTGCACGCTCAACTGGAGGCAGAGCTGGGAGCGGGTTGGCGAGCGCG
GTTCCGCACATTCGGCGAGAAACCCGTGGCGGCGGCCTCCATCGGGCAGG
TGCACCGGGCTCGGACGATTGATGGGCGCGATGTCGCGGTGAAAGTACAA
TATCCTGGCGTGGGTGATTCCATCGAGAGCGACTTGAAAAACCTCAAGAG
ACTGGTCACGTACCTGAACGTCCTGCCGCCAGGACTGTACGTGGACGAAA
TCTTGGACGTGGCACGAGAGGAGCTAATACTAGAGTGTGACTACAAGCTA
GAGGCACAAAATCAAGAGCGATTCAAACTTCTGGTGGAATCGGACCCGGC
ACTCGTACCGCATGTGTTAGTCCCTGGCGTAGTGTCGGACTTGAGCAGCC
GCCAAGTGCTCACATCCGAGTGGATGACGGGGGAGCCCGTCGACCGCGTC
GTTGCCCTAGATCAGGACATTCGAAACCGCGTCGCACGACTTATTTTGTT
ATTGACTCTTAGAGAGCTCTTTGATTGGCGATTCATGCAGACAGATCCCA
ACTGGTCCAATTTCTTGTATGACAGGAGCACGGGAAAGTTGGCCCTCTTG
GATTTCGGGGCCTCAAGAAGCTACCAGAAGGCATTTGTGGACAAGTATTT
GGAGCTAGTGTGGGCAGCCGCTAATCGTGACACGTCGAAACTTATGATTG
CTAGCCATCAATTGGGATTTTTGACAGGTGATGAGTCAACTCAAATGCTG
CGCGCACACGAGAGCGCCGGGCTTGTCGTAGGCGAACCCTTCGTAAATCA
CGAGCCGTTCGACTTTCACGGAAGCAACATGACTGTGCGAATATCGCATC
ACGGCAAAACATTCATGAATCATCGCCTTACTCCCCCACCTCGAGAAGCC
TACTCTCTACACCGGAAGCTCGCGGGAGCATTTCTGCTCTGTATCAAGCT
AAAAGCTGTAATTCCATGCCGAGATTTGCTGGAGGAAACTCACAAGATGT
ATACTGAAAATAAACTATGA back to topCoding sequence (CDS) from alignment at CM002462.1:541239..543208- >rna3977 ID=rna3977|Name=rna3977|organism=Nannochloropsis gaditana|type=CDS|length=3756bp|location=Sequence derived from alignment at CM002462.1:541239..543208- (Nannochloropsis gaditana)
AATGTGAATGCACCACGCAGAATGGTCTCTCAGTTTTTGGACACAGCACA
GAATGTGGCGGGTCGTTCTCCAGACATGTCGAAAGAGGGTTTGCACAAAA
TTGTGCGGCCTGACCCGCCAGCTTCCGGGGAAGATTTTCCTAGCGGCAAG
ACCACTTCGTCCTATTTTTCTGAGCAAGCCAATAGCAGCTCGACAACCTC
TTCCATGGCAGCAAAAACGTCTGATGCAGAACCTGTTGGGCCACCGACTG
CATCTGGGCCTGTCTCTTCACGAAATTACGAGGCGCAAACACGCCCTCTT
CTAGCCCGCACTCGGGAGGAAGACTCGTCTCTCCTGAAGATGAGCACGGA
GGCCTCCTCGAGCCAAGAAGCCCTTCGCCAAGCCCTGGCGGATTCTGAAA
CGGTTGTCGCACCCTTTAGAGATTCCCCTTTACCGAAATATGAGCAGAAG
GAGCGGTCTGTGCCCGCCTCACCTCTCTCCCGCGTTTTGGGGTTTGGTAG
TCTGGCAGCTCGTCTTGCCGTGACTGGGGCCTACGAGGCTGTCCGGAGGC
AAATAGTCATGACGGCCTCGGATCAGGAGGCGCCAGGATCTTCCTCTGCT
GAAGCAAGGCCTCGAACGCTCTTGTCTGACAGAAGCGCCGAGCACATTGC
AGAGACCCTGTGCAAGATGCGAGGCGCCGCACTGAAGCTCGGGCAGATGA
TGAGCTTACAGGACGAAGGAATTCTTCCAGAGCCGTTGACGAAGGCCTTG
GAGCGAGTACGACAGGGTGCGGACGTGATGCCGCGTGCGCAACTGCACGC
TCAACTGGAGGCAGAGCTGGGAGCGGGTTGGCGAGCGCGGTTCCGCACAT
TCGGCGAGAAACCCGTGGCGGCGGCCTCCATCGGGCAGGTGCACCGGGCT
CGGACGATTGATGGGCGCGATGTCGCGGTGAAAGTACAATATCCTGGCGT
GGGTGATTCCATCGAGAGCGACTTGAAAAACCTCAAGAGACTGGTCACGT
ACCTGAACGTCCTGCCGCCAGGACTGTACGTGGACGAAATCTTGGACGTG
GCACGAGAGGAGCTAATACTAGAGTGTGACTACAAGCTAGAGGCACAAAA
TCAAGAGCGATTCAAACTTCTGGTGGAATCGGACCCGGCACTCGTACCGC
ATGTGTTAGTCCCTGGCGTAGTGTCGGACTTGAGCAGCCGCCAAGTGCTC
ACATCCGAGTGGATGACGGGGGAGCCCGTCGACCGCGTCGTTGCCCTAGA
TCAGGACATTCGAAACCGCGTCGCACGACTTATTTTGTTATTGACTCTTA
GAGAGCTCTTTGATTGGCGATTCATGCAGACAGATCCCAACTGGTCCAAT
TTCTTGTATGACAGGAGCACGGGAAAGTTGGCCCTCTTGGATTTCGGGGC
CTCAAGAAGCTACCAGAAGGCATTTGTGGACAAGTATTTGGAGCTAGTGT
GGGCAGCCGCTAATCGTGACACGTCGAAACTTATGATTGCTAGCCATCAA
TTGGGATTTTTGACAGGTGATGAGTCAACTCAAATGCTGCGCGCACACGA
GAGCGCCGGGCTTGTCGTAGGCGAACCCTTCGTAAATCACGAGCCGTTCG
ACTTTCACGGAAGCAACATGACTGTGCGAATATCGCATCACGGCAAAACA
TTCATGAATCATCGCCTTACTCCCCCACCTCGAGAAGCCTACTCTCTACA
CCGGAAGCTCGCGGGAGCATTTCTGCTCTGTATCAAGCTAAAAGCTGTAA
TTCCATGCCGAGATTTGCTGGAGGAAACTCACAAGATGTATACTGAAAAT
AAACTATGAATGCGTTCCAACGATGCCATGAGGGTACTACAAGGTGCCAC
TTTGGTGGTTGAGAATATGATGCGTGAGAATGTGAATGCACCACGCAGAA
TGGTCTCTCAGTTTTTGGACACAGCACAGAATGTGGCGGGTCGTTCTCCA
GACATGTCGAAAGAGGGTTTGCACAAAATTGTGCGGCCTGACCCGCCAGC
TTCCGGGGAAGATTTTCCTAGCGGCAAGACCACTTCGTCCTATTTTTCTG
AGCAAGCCAATAGCAGCTCGACAACCTCTTCCATGGCAGCAAAAACGTCT
GATGCAGAACCTGTTGGGCCACCGACTGCATCTGGGCCTGTCTCTTCACG
AAATTACGAGGCGCAAACACGCCCTCTTCTAGCCCGCACTCGGGAGGAAG
ACTCGTCTCTCCTGAAGATGAGCACGGAGGCCTCCTCGAGCCAAGAAGCC
CTTCGCCAAGCCCTGGCGGATTCTGAAACGGTTGTCGCACCCTTTAGAGA
TTCCCCTTTACCGAAATATGAGCAGAAGGAGCGGTCTGTGCCCGCCTCAC
CTCTCTCCCGCGTTTTGGGGTTTGGTAGTCTGGCAGCTCGTCTTGCCGTG
ACTGGGGCCTACGAGGCTGTCCGGAGGCAAATAGTCATGACGGCCTCGGA
TCAGGAGGCGCCAGGATCTTCCTCTGCTGAAGCAAGGCCTCGAACGCTCT
TGTCTGACAGAAGCGCCGAGCACATTGCAGAGACCCTGTGCAAGATGCGA
GGCGCCGCACTGAAGCTCGGGCAGATGATGAGCTTACAGGACGAAGGAAT
TCTTCCAGAGCCGTTGACGAAGGCCTTGGAGCGAGTACGACAGGGTGCGG
ACGTGATGCCGCGTGCGCAACTGCACGCTCAACTGGAGGCAGAGCTGGGA
GCGGGTTGGCGAGCGCGGTTCCGCACATTCGGCGAGAAACCCGTGGCGGC
GGCCTCCATCGGGCAGGTGCACCGGGCTCGGACGATTGATGGGCGCGATG
TCGCGGTGAAAGTACAATATCCTGGCGTGGGTGATTCCATCGAGAGCGAC
TTGAAAAACCTCAAGAGACTGGTCACGTACCTGAACGTCCTGCCGCCAGG
ACTGTACGTGGACGAAATCTTGGACGTGGCACGAGAGGAGCTAATACTAG
AGTGTGACTACAAGCTAGAGGCACAAAATCAAGAGCGATTCAAACTTCTG
GTGGAATCGGACCCGGCACTCGTACCGCATGTGTTAGTCCCTGGCGTAGT
GTCGGACTTGAGCAGCCGCCAAGTGCTCACATCCGAGTGGATGACGGGGG
AGCCCGTCGACCGCGTCGTTGCCCTAGATCAGGACATTCGAAACCGCGTC
GCACGACTTATTTTGTTATTGACTCTTAGAGAGCTCTTTGATTGGCGATT
CATGCAGACAGATCCCAACTGGTCCAATTTCTTGTATGACAGGAGCACGG
GAAAGTTGGCCCTCTTGGATTTCGGGGCCTCAAGAAGCTACCAGAAGGCA
TTTGTGGACAAGTATTTGGAGCTAGTGTGGGCAGCCGCTAATCGTGACAC
GTCGAAACTTATGATTGCTAGCCATCAATTGGGATTTTTGACAGGTGATG
AGTCAACTCAAATGCTGCGCGCACACGAGAGCGCCGGGCTTGTCGTAGGC
GAACCCTTCGTAAATCACGAGCCGTTCGACTTTCACGGAAGCAACATGAC
TGTGCGAATATCGCATCACGGCAAAACATTCATGAATCATCGCCTTACTC
CCCCACCTCGAGAAGCCTACTCTCTACACCGGAAGCTCGCGGGAGCATTT
CTGCTCTGTATCAAGCTAAAAGCTGTAATTCCATGCCGAGATTTGCTGGA
GGAAACTCACAAGATGTATACTGAAAATAAACTATGAATGCGTTCCAACG
ATGCCATGAGGGTACTACAAGGTGCCACTTTGGTGGTTGAGAATATGATG
CGTGAG back to top
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