ABC1, gene3826 (gene) Nannochloropsis gaditana

Overview
NameABC1
Unique Namegene3826
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002462.1:541239..543208 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100001g142
Gene biotypeprotein_coding
GeneABC1
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002462.1supercontigCM002462.1:541239..543208 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL141ngnoL141Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO08G02360NO08G02360Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna3977rna3977-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna3977rna3977Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna3977

>rna3977-protein ID=rna3977-protein|Name=rna3977|organism=Nannochloropsis gaditana|type=polypeptide|length=625bp
MRSNDAMRVLQGATLVVENMMRENVNAPRRMVSQFLDTAQNVAGRSPDMS
KEGLHKIVRPDPPASGEDFPSGKTTSSYFSEQANSSSTTSSMAAKTSDAE
PVGPPTASGPVSSRNYEAQTRPLLARTREEDSSLLKMSTEASSSQEALRQ
ALADSETVVAPFRDSPLPKYEQKERSVPASPLSRVLGFGSLAARLAVTGA
YEAVRRQIVMTASDQEAPGSSSAEARPRTLLSDRSAEHIAETLCKMRGAA
LKLGQMMSLQDEGILPEPLTKALERVRQGADVMPRAQLHAQLEAELGAGW
RARFRTFGEKPVAAASIGQVHRARTIDGRDVAVKVQYPGVGDSIESDLKN
LKRLVTYLNVLPPGLYVDEILDVAREELILECDYKLEAQNQERFKLLVES
DPALVPHVLVPGVVSDLSSRQVLTSEWMTGEPVDRVVALDQDIRNRVARL
ILLLTLRELFDWRFMQTDPNWSNFLYDRSTGKLALLDFGASRSYQKAFVD
KYLELVWAAANRDTSKLMIASHQLGFLTGDESTQMLRAHESAGLVVGEPF
VNHEPFDFHGSNMTVRISHHGKTFMNHRLTPPPREAYSLHRKLAGAFLLC
IKLKAVIPCRDLLEETHKMYTENKL
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Synonyms
Publications