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Properties
| Property Name | Value |
|---|
| Product | cytochrome c oxidase subunit vb |
| Orig transcript id | gnl|cribi|Naga_100001g147.8133.mrna |
| Orig protein id | gnl|cribi|Naga_100001g147.8133 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002462.1 | supercontig | CM002462.1:536265..537352 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3973 ID=rna3973|Name=rna3973|organism=Nannochloropsis gaditana|type=mRNA|length=270bp
ATGGACACGAAGGTTCCGGGTTGGTTAGAGAGCCCGCAAAGCAGCCAACC
CCCTTATCTGCTAACGGTTACTTGCTTTTGCTTCCCTGTTAATTGCTCAG
AGCGAAAGAAAATAGCTTGGGTGAGAATTATGTCTCGGGTGTACGATAAA
AGCTTGTCTCAGAAGATGTGGTTGGGAAGTGGTGTTTGCCGAGAAGATGG
ACAACATCATTTAAGGCCTCTTTTGCCAGCCAGCCCCGTCGCATTAGACA
GCATTTTTTTGTTTCTTTAG back to topprotein sequence of rna3973 >rna3973-protein ID=rna3973-protein|Name=rna3973|organism=Nannochloropsis gaditana|type=polypeptide|length=260bp
MTPVSVGGTKLPTHLVAITLNELYTDSCFGEVLENVAWKVLAFYLRHAML
SGKIYPTDSCTYPIASLHASPRLSESTSLGTAAIFSLWLSLVLMVSRPWL
HRMISALKRIASAPVPKRQALGVLSTARHLGTLGEELKSAPSKEDEAKYA
KVIKVGDKLYGVPAVQEGTFGHDLQQQVGRRFEELVYELNGEVLFNRDPV
FALPDQGTKSNPVLVPSGENERIVGYEDPHVHQVFWFKLRKGDLVYVPKI
DKYFSLYKID back to topmRNA from alignment at CM002462.1:536265..537352- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3973 ID=rna3973|Name=rna3973|organism=Nannochloropsis gaditana|type=mRNA|length=1088bp|location=Sequence derived from alignment at CM002462.1:536265..537352- (Nannochloropsis gaditana)
ATGACTCCCGTGTCCGTGGGAGGCACAAAGCTACCCACACACCTAGTTGC
CATAACCTTGAATGAATTATATACTGATTCTTGCTTCGGTGAAGTTTTGG
AGAATGTGGCTTGGAAAGTCCTAGCTTTTTATCTCAGACATGCAATGCTA
TCAGGAAAGATTTACCCGACAGATTCCTGCACGTACCCTATTGCCTCTTT
GCATGCATCACCCCGTCTTTCAGAGAGTACCTCTTTGGGAACAGCGGCCA
TATTTTCTCTTTGGCTATCCCTTGTGCTCATGGTTTCTCGCCCCTGGTTG
CACAGGATGATAAGTGCATTGAAACGTATCGCCTCGGCTCCTGTGCCGAA
ACGACAGGCTTTGGGCGTGCTGTCGACTGCGCGCCATCTGGGGACACTGG
GGGAGGAGCTGAAAAGTGCCCCAAGCAAAGAAGACGAAGCAAAGTACGCG
AAAGTTATCAAAGTGGGAGACAAGCTCTATGGCGTGCCCGCGGTACAGGA
AGGTACCTTTGGACATGACCTTCAGCAGCAGGTCGGGCGGCGGTTTGAGG
AGCTTGTTTACGAGCTCAACGGTGAGGTAAGTCTAGAAAAGGAAAATTAA
GAAGGTCCTTTGTCGATCGACCTGTGTAGGTGCCCCTTTTTCTAGGGCAG
TCCTGTAGCTTGCTTCCTTTCGATTTTCCCCTGCTCTGCTTCATGTCTTT
GCCAATTGTATCGCAAATGTTGTCGACAAGAGTAACGAAATCATCTTATA
CCTCTGTGGGGTCTTTCTCCGACCGATTTCAGGTGCTGTTCAATCGTGAT
CCAGTTTTCGCGCTTCCCGATCAAGGAACCAAGAGCAACCCCGTGTTGGT
ACGTTACTTGCCCTGCATTGATAGGTGGTTGGTGTCATCTCCCCTTTTTT
CTCTGTGGCAACTGCTCATTTTCCGAACAATCTTCGTCAACTCTCAGGTA
CCTTCTGGAGAAAACGAGCGCATTGTAGGCTACGAAGACCCGCACGTGCA
CCAGGTCTTCTGGTTCAAGCTGCGTAAAGGCGACCTTGTCTACGTTCCTA
AGATCGATAAGTACTTTTCTCTTTACAAGATTGATTAA back to topCoding sequence (CDS) from alignment at CM002462.1:536265..537352- >rna3973 ID=rna3973|Name=rna3973|organism=Nannochloropsis gaditana|type=CDS|length=2349bp|location=Sequence derived from alignment at CM002462.1:536265..537352- (Nannochloropsis gaditana)
GTACCTTCTGGAGAAAACGAGCGCATTGTAGGCTACGAAGACCCGCACGT
GCACCAGGTCTTCTGGTTCAAGCTGCGTAAAGGCGACCTTGTCTACGTTC
CTAAGATCGATAAGTACTTTTCTCTTTACAAGATTGATTAAGTGCTGTTC
AATCGTGATCCAGTTTTCGCGCTTCCCGATCAAGGAACCAAGAGCAACCC
CGTGTTGATGACTCCCGTGTCCGTGGGAGGCACAAAGCTACCCACACACC
TAGTTGCCATAACCTTGAATGAATTATATACTGATTCTTGCTTCGGTGAA
GTTTTGGAGAATGTGGCTTGGAAAGTCCTAGCTTTTTATCTCAGACATGC
AATGCTATCAGGAAAGATTTACCCGACAGATTCCTGCACGTACCCTATTG
CCTCTTTGCATGCATCACCCCGTCTTTCAGAGAGTACCTCTTTGGGAACA
GCGGCCATATTTTCTCTTTGGCTATCCCTTGTGCTCATGGTTTCTCGCCC
CTGGTTGCACAGGATGATAAGTGCATTGAAACGTATCGCCTCGGCTCCTG
TGCCGAAACGACAGGCTTTGGGCGTGCTGTCGACTGCGCGCCATCTGGGG
ACACTGGGGGAGGAGCTGAAAAGTGCCCCAAGCAAAGAAGACGAAGCAAA
GTACGCGAAAGTTATCAAAGTGGGAGACAAGCTCTATGGCGTGCCCGCGG
TACAGGAAGGTACCTTTGGACATGACCTTCAGCAGCAGGTCGGGCGGCGG
TTTGAGGAGCTTGTTTACGAGCTCAACGGTGAGGTACCTTCTGGAGAAAA
CGAGCGCATTGTAGGCTACGAAGACCCGCACGTGCACCAGGTCTTCTGGT
TCAAGCTGCGTAAAGGCGACCTTGTCTACGTTCCTAAGATCGATAAGTAC
TTTTCTCTTTACAAGATTGATTAAGTGCTGTTCAATCGTGATCCAGTTTT
CGCGCTTCCCGATCAAGGAACCAAGAGCAACCCCGTGTTGATGACTCCCG
TGTCCGTGGGAGGCACAAAGCTACCCACACACCTAGTTGCCATAACCTTG
AATGAATTATATACTGATTCTTGCTTCGGTGAAGTTTTGGAGAATGTGGC
TTGGAAAGTCCTAGCTTTTTATCTCAGACATGCAATGCTATCAGGAAAGA
TTTACCCGACAGATTCCTGCACGTACCCTATTGCCTCTTTGCATGCATCA
CCCCGTCTTTCAGAGAGTACCTCTTTGGGAACAGCGGCCATATTTTCTCT
TTGGCTATCCCTTGTGCTCATGGTTTCTCGCCCCTGGTTGCACAGGATGA
TAAGTGCATTGAAACGTATCGCCTCGGCTCCTGTGCCGAAACGACAGGCT
TTGGGCGTGCTGTCGACTGCGCGCCATCTGGGGACACTGGGGGAGGAGCT
GAAAAGTGCCCCAAGCAAAGAAGACGAAGCAAAGTACGCGAAAGTTATCA
AAGTGGGAGACAAGCTCTATGGCGTGCCCGCGGTACAGGAAGGTACCTTT
GGACATGACCTTCAGCAGCAGGTCGGGCGGCGGTTTGAGGAGCTTGTTTA
CGAGCTCAACGGTGAGGTACCTTCTGGAGAAAACGAGCGCATTGTAGGCT
ACGAAGACCCGCACGTGCACCAGGTCTTCTGGTTCAAGCTGCGTAAAGGC
GACCTTGTCTACGTTCCTAAGATCGATAAGTACTTTTCTCTTTACAAGAT
TGATTAAGTGCTGTTCAATCGTGATCCAGTTTTCGCGCTTCCCGATCAAG
GAACCAAGAGCAACCCCGTGTTGATGACTCCCGTGTCCGTGGGAGGCACA
AAGCTACCCACACACCTAGTTGCCATAACCTTGAATGAATTATATACTGA
TTCTTGCTTCGGTGAAGTTTTGGAGAATGTGGCTTGGAAAGTCCTAGCTT
TTTATCTCAGACATGCAATGCTATCAGGAAAGATTTACCCGACAGATTCC
TGCACGTACCCTATTGCCTCTTTGCATGCATCACCCCGTCTTTCAGAGAG
TACCTCTTTGGGAACAGCGGCCATATTTTCTCTTTGGCTATCCCTTGTGC
TCATGGTTTCTCGCCCCTGGTTGCACAGGATGATAAGTGCATTGAAACGT
ATCGCCTCGGCTCCTGTGCCGAAACGACAGGCTTTGGGCGTGCTGTCGAC
TGCGCGCCATCTGGGGACACTGGGGGAGGAGCTGAAAAGTGCCCCAAGCA
AAGAAGACGAAGCAAAGTACGCGAAAGTTATCAAAGTGGGAGACAAGCTC
TATGGCGTGCCCGCGGTACAGGAAGGTACCTTTGGACATGACCTTCAGCA
GCAGGTCGGGCGGCGGTTTGAGGAGCTTGTTTACGAGCTCAACGGTGAG back to top
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