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Properties
Property Name | Value |
Product | hypothetical protein |
Orig transcript id | gnl|cribi|Naga_100001g149.8174.mrna |
Orig protein id | gnl|cribi|Naga_100001g149.8174 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002462.1 | supercontig | CM002462.1:533800..536047 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna3971 ID=rna3971|Name=rna3971|organism=Nannochloropsis gaditana|type=mRNA|length=2890bp AGGTTGACATAGTGAAGGATTGCACCGACTGTTGCTCGGAAATTCTCGAG GATATGGTAACAGCCACGAAGCAACAGTCGTAACATTCACAAGATCGGGA CACGCATAGCTCTTCCTTCTCTGCGCAGCTTTGTTCTCCTTCCTTTTCAC ACATTGTGACGCTGTCCATGATGAGAGCATCCTAGCGTAGATTATACTTG CCCCAGGGTAATTGTGCCAGCGCCCCACCAATCAGGGGATAGTGACCTCA TTTCGGGCTGTGCATCCGTCTGATACACACACAGGGCTGAGAAGGTAGAG GCAGGCGATCGCGGCTCATCTTTCCCTCTCAGGGTAACGCACGCATCAAA GCAGCAAGACTGCGTACCATAGAAGGGGCTAAGTGGATCATCACATCTAG ACGAAAAATCAAGTTTGCGAAATGTCGTCTCCGGGCAGAGCCAAAGCTCT TGTTTTTTCGCTCATAGGAGTAAGCGTCCTGGCAGGCCTCACGGTTGCCC TGTTAGGAATCTATGGACAGGGGATTTTCCCCAAAAAAGACAAAAATGGA TGGCACGACCCGAGGCTCAGTTATGTGAAAACACCCAGTCTGGACGAGCT AAGGGCAACTTTCGTTCCGGACACATGCTTCGACTCCTTCGATCTCGCCT GGAGTTCGGGCAAGGATGGTCAGATATACGCCAACACAGCACCCTTCTTT GTCAAAGGCATCAGTTGGTTTGGATGCGAGGGTCATGGATATACGTTCAC CGGCCTGAACTTCACCACTGTGGACACAATCTTAAACTTCTTCCTGCAGC ACAAGTTCAACACGGTTCGCATCCCGGTTTCAGTGGCCTTCGGGTTAGCG CCAAAGGACTTTAAGCCAAATCAGCGCTTCGTGGGAAAAGGACTAAAGGG CAAGACTATCTGGGAGATCTTGGACGAGGTGATAGACCAGGCTGCGTTAC GAGGGCTGATGGTGATGCTCGACATGCACACCCTGGGCCCCCAGGAGGCC ACGGATCTTTGGTACGACGAGCAATACAAAGAGGCGGACATCCTGCAGGC ATGGAGTAATATAATGGCTGCATACTCTATTAAATGGAATGTTTTTGCTC TGGACCTGAAAAACGAGCCTCACGGCATCGCTACTTGGGGCGTTAGTGCG CCTCAGACGGATTACAATAAGTTCTACGAGCGCGCCATTGCACACATTCA CACCCAGTTTCCGAACTGGAAGGGCTTGTACATGGTTGAGGGTGTGCAAT ATAACAAAGAGACGGACAAGGTGACCGATTATCCGTTCTGGTGGGGCGGG AATTTCGGTGGTGCAATTCAACATCCTATATACGTGCCGGTACCCGAGGT CATGAACAGGGTAGTTTACTCGCCGCACGTGTACGGGCCCGACGTGTACG ATCACCCGTACATGAACGTTCCAGCAGCAGAGCTGGCTAACGAGCTTGTT AAGGTGTGGGACTCACAGATGGGCTGGCTTATTCCGAAGCTGCAGAAGGG CATGATTATCGGAGAGTGGGGCGGGTCGCTGAAAGGGCGTGATGAGATTG TTCAGACAGAGTTGGCCAAGTGGCTGGTAAAGAATTGCATGGCTAATAAC GTCTGGTGGGCAATAAACCCTGAGTCGTCGGACACGGGCGGCATTATGGC CTGGAATTGGAAGACGTACGACAAACGGCGCTTGGACTTGGTTGACTCGA TTTTCCCGGACCCCACCCAGTTCGGTATCAAGCATTCCAAGCTCTGTCTG CGATTTGGTACCTATCCCAACCCGCAGTGTCCAGTTCAACCCTTTCACAG CCCTGAGGTTGCCACCCCCCAGAAATTACGGCATTAAAATGCCTCGAGTC AACCGGAGCACTCAGACTACTTTGGGTAGGTGAGGCAAAATGCGGGTAGA TATCTTAAAGCATGATTCGAGGCGGTGTGTAGGCACAGACAAGCACACGC TCTCGTATAAAACCTTGTAATCTATCTGTAGCTCTGGGCGTTATACGACA AAACATACGCTGCTGCGCACAAATGCGGTGCGCAAATAATGGTGCAAACC TTATGCGCACCTCGAACTTCAAGCAAAGATCTCTGTGACCTTTGGGCTGA ATCTCCTCCCAAAATAATGGCAAGTGTAGTGGGAGGAATAGAAATACAAC TACAGAAGGGAAGGTCGACGTGTACTCTTTCTTTGGGTTGAAAGTCCAGT ATAGAACAGTCGGATAGGACCTCGGGTCGTACAATTGATAATCGTTCTGC TTTCGTCGTTGCACCCATACCAGTGTTGTGTAAAAGGTGGGAGGAGATAG AAAACCTGGGGCGACCGCACCTTATTATCTGTCTTTAAAAGTCGGACGAC CGGAAACGGGAATGGGCAGGATCAAAAGGGAGCTGGGAAGGTCTCTGGGG GGGCAGAGGCACGAATGTGATAGATTATTGTCTCATGTTGAGATCAATTA AAAAAGTTGGATCATACTACTGTGAAATTAGAGGAAGTGATCACACATGA GAGCAACGGGGCAGTATGTGGATGGTCATGTATGGTATGTGTTTCAAAGG ATCGAAGGGAAACTTGAAGTTGAAATTAGTCTACTTGTCATCCTCCGGTA GTAGCTGAAAATTCTTCGCTCTGCATGCATCATCACTGATTAAATTACAT GGTTTTGATTGAAAGATGGATTTCCAGCGCACCCATGTGTAATCATGAAC CCTCTCAGCTTCTGGCGCATCTTGAAGCTATATTAAATATGTGTTCGTCT GTATGTTTACACAAAAGCACACGTACAAAGGTTTAATATACCATATGTCC TGGGGGTACTTGGAAACATGCTTCCTTTCTTACTTAAGCAGCGAGCCTCC TAGCTTGCGTTAGGTACCCTCTAATTCTATTAACTATGTC back to topprotein sequence of rna3971 >rna3971-protein ID=rna3971-protein|Name=rna3971|organism=Nannochloropsis gaditana|type=polypeptide|length=490bp MRATKENYQSDRLRDRTESYPFPDEQDNDIPNRPTAHPLLRLSDQTEVLI RNDSRVGYPVEQPDVGPESFGWLFPAQQILLNYVLQEGTRIVVQLGAYLG KTTLFIAEHAPRALIFVIDPWDNAALKAEPSLNKNFANIDLFERIPFYAT FLRNTWHLAARRGSNKDNLLVGVVPLRMKFEEGIALLKSTLNLRPDVLYW EGFPNETGLSQTLHAVKEAFPGVVVVGDGYNYSEVQKGLAKASRSLFQER KPFVEMGKCWTFLRLKKEMLSDLRLKYTAADNRAKRTILRDKEVAGASFK DLLSGLKSKSQQLKYEEAGERAARRMAEEEERDRVMQGRESGETRRRNRP AIQGIGEKGGGVIRISKMYGGESGRGRGSRRIGGYGGCDQQHGRGAGEGA EFRRGDEQGMGRGVSRHRSPSQSSRPEKEAPSGTTMGESGSAPRQREESD EEGRRHWKRRCFRNEIDESEDDEARGESTEEVDDDRPVRG back to topmRNA from alignment at CM002462.1:533800..536047+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna3971 ID=rna3971|Name=rna3971|organism=Nannochloropsis gaditana|type=mRNA|length=2248bp|location=Sequence derived from alignment at CM002462.1:533800..536047+ (Nannochloropsis gaditana) TGATTTAACGCGAGTGCCACGGTACAGCCACCACGCACTGCCCTCACCTC
CAtgtcagcccctccctcgcttcctccctccctccctccctcgctccatc
gctccctcgctccctcgctccctccctaacctccctcctggcttccctcc
ctccctacctccctccctccctcgcgtcctcgcttcctctctttctccct
ccctccatctttccttcacccccttcctcactttCTGGCTACCTCcaccc
ctcgctccccgcctcccttccactctggctccctctctcgcttcctccct
ccctccctccgggcgGCGAGCGAGTGCACTGCCGAGGCGATGAGGGGGGC
AAAGTGCTTCATCTCGCGTCATTTCCTATTCCATGCGAATTCAAGTATGC
TGACTTTCTGCCACAAATAGAGAGGTGGTAGAACCAAGGAAATGCGCGCG
ACGAAGGAAAATTACCAAAGCGACCGTCTTCGGGATCGCACGGAGAGCTA
TCCTTTCCCGGATGAGCAGGATAATGATATTCCAAATCGCCCGACAGCCC
ATCCATTACTGCGTCTCTCAGACCAGACTGAAGTTCTCATACGTAACGAC
TCAAGAGTAGGATACCCTGTCGAACAGCCGGATGTGGGACCGGAAAGGTA
ATTTATTGACGGGGAAATAGTCAGCAACATATTATCTCTTAAAGCAGGAG
TACGGTAGTATGGACTGCGATCCTCCATTGGCAGATGGCGTTTAACCCAT
CAGCAAGCCTGGCATGTCTGATCCAGCGGTAATTACTCATTTGATATCGA
CTCATTTCGATCACTCCACCACTTCACGCCTCAGTTTTGGTTGGCTGTTC
CCCGCGCAGCAGATTCTATTGAACTATGTGCTCCAGGAAGGGACAAGAAT
AGTTGTGCAGCTCGGCGCTTACCTGGGAAAAACAACATTGTTCATCGCGG
AGCATGCCCCTCGCGCTTTGATTTTTGTCATCGATCCCTGGGACAATGCC
GCACTCAAAGCTGAGCCGTCTTTGAACAAAAATTTTGCCAACATCGACCT
TTTCGAGCGCATTCCTTTCTATGCCACTTTCCTCCGGAACACTTGGCATT
TAGCGGCACGGCGTGGATCGAACAAAGACAATCTTCTCGTTGGTGTTGTA
CCATTACGCATGAAATTTGAAGAGGGCATTGCTTTGCTAAAGTCTACACT
CAACCTGCGCCCAGATGTTCTGTACTGGGAGGGCTTTCCCAACGAGACGG
GTCTGTCTCAGACACTGCACGCTGTGAAGGAGGCATTTCCAGGCGTGGTA
GTTGTAGGTGATGGTTACAATTATTCGGAAGTACAGAAGGGCCTCGCTAA
GGCTAGCAGATCTCTGTTCCAGGAGCGCAAGCCTTTCGTGGAGATGGGCA
AATGCTGGACTTTCCTGCGTCTGAAAAAAGAGATGTTGTCTGATTTGAGA
TTGAAGTACACAGCCGCTGACAACAGAGCTAAGCGCACCATACTGAGAGA
CAAAGAAGTAGCGGGGGCTTCTTTCAAAGACTTGCTTTCTGGGCTAAAGT
CGAAGAGCCAGCAGCTCAAATACGAGGAGGCTGGAGAGCGGGCAGCGAGG
CGTAtggccgaggaagaggagagggacagggtCATGCAAGGGCGGGAATC
GGGGGAGACAAGGCGACGTAACAGGCCAGCAATCCAAGGAATcggggaga
aaggcggaggggtaATACGGATAAGCAAAATGTacggaggagaaagtgga
cGAGGTCGCGGGAGTCGGAGGATAGGGGGATATGGGGGATGCGACCAGCA
GCATggcagaggggcgggggaaggagctgaGTTTCGACGTGGAGATGAGC
AGGGCATGGGACGCGGAGTCAGTCGGCATCGCAGCCCGAGCCAAAGTTCG
AGgccggaaaaggaggcgccGTCGGGCACCACCATGGGGGAGAGCGGTTC
CGCACCgcggcagagggaggaaagcgacgaggaagggaggcgacACTGGA
AGCGGAGGTGCTTCCGAAATGAGATTGATGAGAGCGAAGATGACGAGGCG
AGAGGTGAGAGCACCGAGGAAGTGGACGATGACCGCCCAGTCCGGGGCTa
aagaaacaaaaaaatgCTGTCTAATGCGACGGGGCTGGCTGGCAAAAGAG
GCCTTAAATGATGTTGTCCATCTTCTCGGCAAACACCACTTCCCAACCAC
ATCTTCTGAGACAAGCTTTTATCGTACACCCGAGACATAATTCTCACC back to topCoding sequence (CDS) from alignment at CM002462.1:533800..536047+ >rna3971 ID=rna3971|Name=rna3971|organism=Nannochloropsis gaditana|type=CDS|length=2946bp|location=Sequence derived from alignment at CM002462.1:533800..536047+ (Nannochloropsis gaditana) ATGCGCGCGACGAAGGAAAATTACCAAAGCGACCGTCTTCGGGATCGCAC GGAGAGCTATCCTTTCCCGGATGAGCAGGATAATGATATTCCAAATCGCC CGACAGCCCATCCATTACTGCGTCTCTCAGACCAGACTGAAGTTCTCATA CGTAACGACTCAAGAGTAGGATACCCTGTCGAACAGCCGGATGTGGGACC GGAAAGTTTTGGTTGGCTGTTCCCCGCGCAGCAGATTCTATTGAACTATG TGCTCCAGGAAGGGACAAGAATAGTTGTGCAGCTCGGCGCTTACCTGGGA AAAACAACATTGTTCATCGCGGAGCATGCCCCTCGCGCTTTGATTTTTGT CATCGATCCCTGGGACAATGCCGCACTCAAAGCTGAGCCGTCTTTGAACA AAAATTTTGCCAACATCGACCTTTTCGAGCGCATTCCTTTCTATGCCACT TTCCTCCGGAACACTTGGCATTTAGCGGCACGGCGTGGATCGAACAAAGA CAATCTTCTCGTTGGTGTTGTACCATTACGCATGAAATTTGAAGAGGGCA TTGCTTTGCTAAAGTCTACACTCAACCTGCGCCCAGATGTTCTGTACTGG GAGGGCTTTCCCAACGAGACGGGTCTGTCTCAGACACTGCACGCTGTGAA GGAGGCATTTCCAGGCGTGGTAGTTGTAGGTGATGGTTACAATTATTCGG AAGTACAGAAGGGCCTCGCTAAGGCTAGCAGATCTCTGTTCCAGGAGCGC AAGCCTTTCGTGGAGATGGGCAAATGCTGGACTTTCCTGCGTCTGAAAAA AGAGATGTTGTCTGATTTGAGATTGAAGTACACAGCCGCTGACAACAGAG CTAAGCGCACCATACTGAGAGACAAAGAAGTAGCGGGGGCTTCTTTCAAA GACTTGCTTTCTGGGCTAAAGTCGAAGAGCCAGCAGCTCAAATACGAGGA GGCTGGAGAGCGGGCAGCGAGGCGTAtggccgaggaagaggagagggaca gggtCATGCAAGGGCGGGAATCGGGGGAGACAAGGCGACGTAACAGGCCA GCAATCCAAGGAATcggggagaaaggcggaggggtaATACGGATAAGCAA AATGTacggaggagaaagtggacGAGGTCGCGGGAGTCGGAGGATAGGGG GATATGGGGGATGCGACCAGCAGCATggcagaggggcgggggaaggagct gaGTTTCGACGTGGAGATGAGCAGGGCATGGGACGCGGAGTCAGTCGGCA TCGCAGCCCGAGCCAAAGTTCGAGgccggaaaaggaggcgccGTCGGGCA CCACCATGGGGGAGAGCGGTTCCGCACCgcggcagagggaggaaagcgac gaggaagggaggcgacACTGGAAGCGGAGGTGCTTCCGAAATGAGATTGA TGAGAGCGAAGATGACGAGGCGAGAGGTGAGAGCACCGAGGAAGTGGACG ATGACCGCCCAGTCCGGGGCTaaATGCGCGCGACGAAGGAAAATTACCAA AGCGACCGTCTTCGGGATCGCACGGAGAGCTATCCTTTCCCGGATGAGCA GGATAATGATATTCCAAATCGCCCGACAGCCCATCCATTACTGCGTCTCT CAGACCAGACTGAAGTTCTCATACGTAACGACTCAAGAGTAGGATACCCT GTCGAACAGCCGGATGTGGGACCGGAAAGTTTTGGTTGGCTGTTCCCCGC GCAGCAGATTCTATTGAACTATGTGCTCCAGGAAGGGACAAGAATAGTTG TGCAGCTCGGCGCTTACCTGGGAAAAACAACATTGTTCATCGCGGAGCAT GCCCCTCGCGCTTTGATTTTTGTCATCGATCCCTGGGACAATGCCGCACT CAAAGCTGAGCCGTCTTTGAACAAAAATTTTGCCAACATCGACCTTTTCG AGCGCATTCCTTTCTATGCCACTTTCCTCCGGAACACTTGGCATTTAGCG GCACGGCGTGGATCGAACAAAGACAATCTTCTCGTTGGTGTTGTACCATT ACGCATGAAATTTGAAGAGGGCATTGCTTTGCTAAAGTCTACACTCAACC TGCGCCCAGATGTTCTGTACTGGGAGGGCTTTCCCAACGAGACGGGTCTG TCTCAGACACTGCACGCTGTGAAGGAGGCATTTCCAGGCGTGGTAGTTGT AGGTGATGGTTACAATTATTCGGAAGTACAGAAGGGCCTCGCTAAGGCTA GCAGATCTCTGTTCCAGGAGCGCAAGCCTTTCGTGGAGATGGGCAAATGC TGGACTTTCCTGCGTCTGAAAAAAGAGATGTTGTCTGATTTGAGATTGAA GTACACAGCCGCTGACAACAGAGCTAAGCGCACCATACTGAGAGACAAAG AAGTAGCGGGGGCTTCTTTCAAAGACTTGCTTTCTGGGCTAAAGTCGAAG AGCCAGCAGCTCAAATACGAGGAGGCTGGAGAGCGGGCAGCGAGGCGTAt ggccgaggaagaggagagggacagggtCATGCAAGGGCGGGAATCGGGGG AGACAAGGCGACGTAACAGGCCAGCAATCCAAGGAATcggggagaaaggc ggaggggtaATACGGATAAGCAAAATGTacggaggagaaagtggacGAGG TCGCGGGAGTCGGAGGATAGGGGGATATGGGGGATGCGACCAGCAGCATg gcagaggggcgggggaaggagctgaGTTTCGACGTGGAGATGAGCAGGGC ATGGGACGCGGAGTCAGTCGGCATCGCAGCCCGAGCCAAAGTTCGAGgcc ggaaaaggaggcgccGTCGGGCACCACCATGGGGGAGAGCGGTTCCGCAC CgcggcagagggaggaaagcgacgaggaagggaggcgacACTGGAAGCGG AGGTGCTTCCGAAATGAGATTGATGAGAGCGAAGATGACGAGGCGAGAGG TGAGAGCACCGAGGAAGTGGACGATGACCGCCCAGTCCGGGGCTaa back to top
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